mRNA_H-paniculata_contig4467.11264.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: D7G767_ECTSI (Selenoprotein T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G767_ECTSI) HSP 1 Score: 174 bits (442), Expect = 2.460e-47 Identity = 122/278 (43.88%), Postives = 153/278 (55.04%), Query Frame = 2
Query: 2 RYLGDAAAKQQESGKSAET----PADARVAMKLESKLPXXXXDILPESGYARARAAKFGSLDEQEDEFAGL-------------------SRSSEVDKKMIDR-VDLSPDTFIVPHTAASELSQNLREHVPEVLVRYCGS*GMRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNALGVPEPPFVPIMANNKAAVVIGLMFLNSMCASFRNTGAFEVTIDGDLVFSKLK-ENAFPTGARLLKEFDEWGL 760
RY+GD AA GKS T PA A + P +I+P AR A +D+ EDEFAG+ +RS+ + D V+ + T A + VP+VLV++C S GMRRNF ELRSFLH HYP L A SIRGELYP P A+A+A+ GS+ Q+GGVA G IF+ LGVP P FVP+M N A ++GL NS C S TGAFEV+IDG+LVFS+L E FPTGA LL+EF++ GL
Sbjct: 37 RYVGDGAA-----GKSPATSDKPPAGAASGAREVPVAPLA--EIVPTKHMNHARPA----IDDPEDEFAGMGGSTKNTGGGSLGSSNRDDARSAAQQLAVADSSVEFGGTASLGAVTGAGAVGSG--GDVPQVLVQFCVSXGMRRNFEELRSFLHAHYPALAKAQSIRGELYPPPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGL 301
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A7S2D3C0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3C0_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.240e-24 Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 2
Query: 356 MRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNALGVPEPPFVPIMANNKAAVVIGLMFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFPTGARLLKEFDEWGLE 763
M+RNF+ELR+FL YP L+ I GE YP P A S +QMGG+ + G IFN LG+PEP + + NK G+ F+NSM S TGAFEV +DG++V+SKL+ P G +L++ ++ G+E
Sbjct: 1 MKRNFVELRNFLAHRYPELQ--GKIAGENYPPPPYANLAVSAAGTVQMGGIVLMMFGSQIFNTLGMPEPEWYKELQENKMMAFCGVFFMNSMANSLTTTGAFEVLLDGEVVYSKLETGRMPNGRQLIELMEQKGIE 134
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A7S2V5G7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G7_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.030e-22 Identity = 56/147 (38.10%), Postives = 86/147 (58.50%), Query Frame = 2
Query: 320 PEVLVRYCGS*GMRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNALGVPEPPFVPIMANNKAAVVIGLMFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFPTGARLLKEFDEWGL 760
P+V+V+YC M++NF E++ FL YP L SI G+ YP+ + I+ GS L + + GG F+F +G+PEP ++ NN+ V IG+ +N + ++ TGAFEV +D DL+FSKL+ N FP+ L ++GL
Sbjct: 131 PQVIVKYCPQSNMKKNFEEMQQFLEYRYPQL--VGSIHGQNYPLPFHIKVISKIGSSLHLLSLVFLMGGSFVFQKMGIPEPSWLDWAKNNRMQVFIGIFGINYVTSNMAKTGAFEVFLDDDLIFSKLEMNKFPSVQDLQVGLAQFGL 275
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A6S9L5H0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9L5H0_HETAK) HSP 1 Score: 92.8 bits (229), Expect = 8.860e-19 Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query: 356 MRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNALGVPEPP-FVPIMANNKAAVVIGLMFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFP 718
M+RNF+EL+ FL YP E+ +++G YP P A A+A+ G+ GG+A+ F G +F A+G+ PP + M N VV GL LN++ F TGAFEV ++G+ VFSKL+ FP
Sbjct: 1 MQRNFIELQKFLEYSYP--ELVGNVQGTFYPPPPFALALANLGTLALWGGIALTFLGETLFRAVGLAAPPGWFQSMKANPMPVVGGLFALNAVAGGFAKTGAFEVYLNGETVFSKLESGRFP 120
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A7S1BN41_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN41_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.070e-14 Identity = 53/137 (38.69%), Postives = 75/137 (54.74%), Query Frame = 2
Query: 356 MRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNAL---GVPEPPFVPIMANNKAAVVIGLMFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFPTGARLLKEFDEWG 757
MRRNFLELR FL +YP + ++I G P A A LQ+ VA AF G ++N + G PP+ I+ NK AV+ L +NSM S +TGAFE+ +DG ++FSK++ P G ++K + G
Sbjct: 1 MRRNFLELRRFLLQNYPHVFSEENISGGTQPPPSNAMYFAQVTGTLQLIAVAFAFFGDSLWNIVPIWGGRPPPWWGIVLENKVAVMCFLFCVNSMANSQLSTGAFEIDMDGKIIFSKMEAGRMPNGDDIVKALEGMG 137
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A7S1ZVC8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZVC8_TRICV) HSP 1 Score: 78.2 bits (191), Expect = 1.180e-13 Identity = 53/133 (39.85%), Postives = 75/133 (56.39%), Query Frame = 2
Query: 356 MRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNAL----GVPEPPFVPIMANNKAAVVIG-LMFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFPTGARLLK 739
M RNF+ELR +L YP E+ I GE YPI PAA A A+ S Q+ +A F G ++N + G P+ F M N A VVIG + + ++ + TGAFE+ +DG +VFSKL+ FP G +++
Sbjct: 1 MARNFMELRKYLEGSYP--ELRGRITGENYPIPPAAAAFANFVSIAQVFLMATVFMGDAVWNYVPFFSGPPDWYFA--MKENSAVVVIGAFLVVPTIAQKYVTTGAFEIILDGQVVFSKLELGRFPNGNDIME 129
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A5D6XKG8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKG8_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.960e-12 Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2
Query: 323 EVLVRYCGS*GMRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNALGVPEPPFVPIMANNKAAVVIGLMFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFPTGARLLKEFDEWGL 760
EV + YC + G ++NF E++ FL YP L D + G Y + P +A +LQ+ + + G +IF ALG+ + + +N+ ++ + S+ +TGAFEV ++G+LVFSKL + T L + FD GL
Sbjct: 80 EVRILYCSTCGFQQNFAEVKQFLEERYPQL--VDRVSGANYGVDPMRTLLARTLGYLQLVAMVLMVAGEYIFRALGL-DTALLQKALDNRIGCFALILLVGSVSQGLVSTGAFEVILNGELVFSKLAAGRWMTLEELSEIFDARGL 222
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A3R7JXF5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JXF5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.200e-11 Identity = 46/167 (27.54%), Postives = 88/167 (52.69%), Query Frame = 2
Query: 284 ASELSQNLREHVP--EVLVRYCGS*GMRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNALGVPEPPFVPIMANNKAAVVIGLMFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFPTGARLLKEFDEWGLERNPSS 778
A+ +NL+ ++ EV V YC + G NF +++ ++ +P L D + G Y + P + ++ + Q+ + + G +I ALG+ + + NN+ ++F+ S+ S +GAFE+ +GDL+FSKL+ + +PT + DE+GL ++ S+
Sbjct: 46 AATKERNLQRNIADDEVRVLYCTACGYEANFNQVKKYVEDTFPHL--VDRVYGANYDVDPTKKMLSQAINIAQVSAIILLVFGEYILLALGI-DMTMLRWALNNRIPSFFIVLFMGSLANSLTASGAFEIYFNGDLIFSKLEVDRWPTLLEVSNSIDEYGLVQSVST 209
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A7S2XS90_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS90_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.550e-10 Identity = 52/139 (37.41%), Postives = 74/139 (53.24%), Query Frame = 2
Query: 356 MRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGG-SFLQMGGVAVAFGGRFIFNALGVPE--PPFVPIMANNKAAVVIGL-MFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFPTGARLLKEFDEWGL 760
M RNF +L+ FL H+P L +I+G YP PA IAS F+Q+ + F G I+N + + P + M N A V IG+ + + S+ S+ TGAFEV +DG +++SKL P G LLK + GL
Sbjct: 1 MSRNFHQLKEFLEQHFPEL-ANGAIKGANYP-APAWATIASQAIMFMQVFTMMAVFTGDAIWNYIPFVQGAPSWYYSMKQNSAVVFIGIFLIIPSVIQSYITTGAFEVMLDGAVIYSKLATGRMPNGNDLLKPLIQAGL 137
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Match: A0A7S2PKB4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKB4_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.560e-10 Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 2
Query: 356 MRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGVAVAFGGRFIFNAL----GVPEPPFVPIMANNKAAVVIGLMFLNSMCASFRNTGAFEVTIDGDLVFSKLKENAFPTGARLLKEFDEWGL 760
M RN+++LR FL ++P LE +I G YP A ++ LQ+ +A F G I+ + G P P + P + N VV L NS+ S TGAFEV +DG +VFSKL+ P+G +L+ F GL
Sbjct: 1 MSRNYVQLRQFLEQNFPELE--GNIHGSNYPPPEFAVYLSQLIGILQIFAMAAVFMGDAIWQFVPFMNGQP-PGWWPQVKENPMLVVCTLFMGNSIANSMTTTGAFEVLLDGVVVFSKLETGRMPSGPEILQVFKGAGL 136 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4467.11264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4467.11264.1 >prot_H-paniculata_contig4467.11264.1 ID=prot_H-paniculata_contig4467.11264.1|Name=mRNA_H-paniculata_contig4467.11264.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp MRRNFLELRSFLHVHYPTLEVADSIRGELYPITPAAEAIASGGSFLQMGGback to top mRNA from alignment at H-paniculata_contig4467:13306..15456- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4467.11264.1 ID=mRNA_H-paniculata_contig4467.11264.1|Name=mRNA_H-paniculata_contig4467.11264.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2151bp|location=Sequence derived from alignment at H-paniculata_contig4467:13306..15456- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4467:13306..15456- >mRNA_H-paniculata_contig4467.11264.1 ID=mRNA_H-paniculata_contig4467.11264.1|Name=mRNA_H-paniculata_contig4467.11264.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at H-paniculata_contig4467:13306..15456- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |