prot_H-paniculata_contig4467.11263.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4467.11263.1
Unique Nameprot_H-paniculata_contig4467.11263.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length801
Homology
BLAST of mRNA_H-paniculata_contig4467.11263.1 vs. uniprot
Match: A0A6H5JIQ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIQ1_9PHAE)

HSP 1 Score: 491 bits (1263), Expect = 1.150e-158
Identity = 294/533 (55.16%), Postives = 351/533 (65.85%), Query Frame = 0
Query:   43 PVLRTTCDNCTVAKVKCNGARPCVRCTNKAISCEYTYKKRCGPKRRKGKEAEAARARASSDTEGLLASCRSRGKGSGRSGGHLDKAMGSMSVVIGKEEAECVRVFMQNVNAFTPLTTLETVKQAANAGSGAAARSGGEGAHQKPQPQNEEADQKHHARKAVLHGAIAVGAEFLEMEEASQTHAQIARQEIKECFDAAEPELVGAYLILALYWMHQMDSVKIARYIGLAHQSNGIISKPPPELVSSLTFISVILFDAHVVSTVGCCVDPPGPTLSPSARAS--PVASQERVLKILSFVLLAIRNCVDPTN---DPTLSTGEWNAVALARHVDNAKALLDGAS---GPNDMARCVVVMLQAYFLLLRDDHRKAVVITEPLADLVADNPLVLHLPIVWVAISCVRALLDSATRTIAVERLESAMEPLAPRLAFASQESVVGRELLRVFNKKKDRGTRNGAGAGVASSSAPSRTPTAE-------------SILIRQSRVQTSSLNVTASDVHHPRPSVVDLLPVEPSPAPQRRGPP 554
            PVLRTTCD CT AKVKCNG +PCVRC+NK I CEYT+KKRCGPKRRKG   +        +  GLLA       GS   G  L++ +      + K+E ECV VFMQN+N+F PLTT++TV +AA A +                   EE  Q HHA KA+LHGAIA+GAEFLE EE S THA  AR +IKECFDAA PELV A+LILALYW HQMDS KI RYIGLAHQSN IIS  P  LV+SLTF+SVIL+DA VVS++GC V PPG +      +S  P A QERVL ILS+VLLAI N    +N   +P +STG+W+  A+  H+  AKALLD  S   GPND++RC+VV+LQAYF       R+A+VITEPLADLVADNPLVLHLPIVW  + CVR LLD A RTIAVERL+SAM PLA  L F++ ES+V +EL+ VFN K+    R GA      ++AP                     IL+R SR QTSSLNVTA D  H   S +++L +EPSPAP+RRG P
Sbjct:   25 PVLRTTCDACTSAKVKCNGEKPCVRCSNKNIQCEYTFKKRCGPKRRKGVPVD--------NNGGLLAPYPDGVNGSKLVG--LNEHLRGEPTTLNKDEVECVDVFMQNINSFLPLTTIDTVMRAAKATAPXXXXXXXXXXXXXXXXXXEERSQFHHAGKAMLHGAIALGAEFLEKEEVSVTHAVAARDQIKECFDAAAPELVAAHLILALYWTHQMDSSKINRYIGLAHQSNNIISDSPGALVASLTFVSVILYDAKVVSSIGCLVKPPGSSNRAGIPSSSNPAACQERVLNILSYVLLAIHNRSSRSNLAGNPAMSTGDWDPKAMTDHIYEAKALLDKGSAGGGPNDISRCIVVVLQAYFXXXXXXRRQAIVITEPLADLVADNPLVLHLPIVWSLVGCVRVLLDGADRTIAVERLQSAMAPLANHLGFSTDESLVEQELMSVFNGKQGLTKRKGA------TTAPXXXXXXXXXXXXXXXXXXTGDILVRSSRAQTSSLNVTAQDYSHRGRSAINMLALEPSPAPRRRGLP 541          
BLAST of mRNA_H-paniculata_contig4467.11263.1 vs. uniprot
Match: D7G645_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G645_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 9.700e-41
Identity = 135/455 (29.67%), Postives = 207/455 (45.49%), Query Frame = 0
Query:   40 EDEPVLRTTCDNCTVAKVKCNGARPCVRCTNKAISCEYTYKKRCGPKRRKGKEAEAARARASSDTEGLLASCRSRGKGSGRSGGHLDKAMGSMSVVIGKEEAECVRVFMQNVNAFTPLTTLETVKQAANAGSGAAARSGGEGAHQKPQP--------QNEEADQKHHARKAVLHGAIAVGAEFLEMEEASQTHAQIARQEIKECFDAAEPELVGAYLILALYWMHQMDSVKIARYIGLAHQSNGIISKPPPELVSSLTFISVILFDAHVVSTVGCCVDPPGPTLSPSARASPVA-SQERVLKILSFVLLAIRNCVDPTNDPTLSTGEW--NAVALARHVDNAKALLDGASGPNDMARCVVVMLQAYFLLLRDDHRKAV-VITEPLADLVADNPLVLHLPIVWVAISCVRALLDSATRTIAVERLESAMEPLAPRLAFASQESVVGRELLRVFNKK 482
            +DE  LRTTCD CT+ K+KC+G  PC RC  +   C Y  KKRCGPKRRK        +R  SD +G      S G   G   GHL +    + V+  +E+ E +  F  +VN F PLT L  ++ A N                 P P         +E  +  +HARKAVL G +AVGA F   + ++  +   A+  +K+CFDA  PE+V  YL++ +Y +H +D  K+ RYIG A Q+   +++    +V      S+ +    +  T    + P    L       P   S  R++ + S VLL +    D       S  +       L    + A+ LL     P   A  V+  L+ YFLL++   +  +  +  P+A  +  +P VL+ P+ W    CV + L           +++ M+PL   LA+A+    V   ++ V+  K
Sbjct:   48 DDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRK------LSSRDDSDDDG------SHG---GSFAGHLGEGGAGVRVLTSREQ-EFLAKFYSSVNKFIPLTCLTVIRDAMN-----------------PLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQSSAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLVVGGHVRDSLRVLSTFLHVTCNKEIRPQKVHLRGETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQQPVPTMATLGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMKGKEQAVLDAVAMPVAKALEADPAVLNFPLCWTMCQCVSSFLRRKGCHSVAASMDAIMQPLRMTLAYANACCGVALNVVGVYAGK 469          
BLAST of mRNA_H-paniculata_contig4467.11263.1 vs. uniprot
Match: A0A6H5J8L2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L2_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 2.700e-39
Identity = 140/466 (30.04%), Postives = 210/466 (45.06%), Query Frame = 0
Query:   40 EDEPVLRTTCDNCTVAKVKCNGARPCVRCTNKAISCEYTYKKRCGPKRRKGKEAEAARARASSDTEGLLASCRSRGKGSGRSGGHLDKAMGSMSVVIGKEEAECVRVFMQNVNAFTPLTTLETVKQAANAGSGAAARSGGEGAHQKPQP--------QNEEADQKHHARKAVLHGAIAVGAEFLEMEEASQTHAQIARQEIKECFDAAEPELVGAYLILALYWMHQMDSVKIARYIGLAHQSNGIISKPPPELVSSLTFISVILFDAHVVSTVGCCVDPPGPTLSPSARASPVA-SQERVLKILSFVLLAIRNCVDPTND---------PTLSTGEWNAVALARHVDNAKALLDGASGPNDMARCVVVMLQAYFLLLRDDHRKAV-VITEPLADLVADNPLVLHLPIVWV----AISCVRALLDSATRTIAVERLESAMEPLAPRLAFASQESVVGRELLRVFNKK 482
            +DE  LRTTCD CT+ K+KC+G  PC RC  +   C Y  KKRCGPKRRK        +R  SD +G      S G   G   GHL +  G   V+  +E+ E +  F  +VN F PLT L  ++ A N                 P P         +E  +  +HARKAVL G +AVGA F   + ++  +   A+  +K+CFDA  PE+V  YL++ +Y +H +D  K+ RYIG A Q+   +++     V      S+ +    +  T    + P    L       P   S  R++ + S VLL +    D             PTL+T       L    + A+ LL     P   A  V+  L+ YFLL++   +  +  +  P+A  +  +P VL+ P+ W     A  CV + L           +++ M+PL   LA+A+    V   ++ V+  K
Sbjct:  174 DDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRK------LSSRDDSDDDG------SHG---GNFAGHLGEGGGGFRVLTSREQ-EFLAKFYSSVNKFIPLTCLTVIRDAMN-----------------PLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQTYRELAQSNKLGVGEYVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQKPVPTLAT-------LGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMKGKEQAVLDAVAMPVAKALEADPAVLNFPLCWTMWVHACQCVSSFLRRKGCHSVAASMDAIMQPLRLTLAYANACCGVALNVVGVYAGK 599          
BLAST of mRNA_H-paniculata_contig4467.11263.1 vs. uniprot
Match: D7G644_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G644_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 7.610e-36
Identity = 119/402 (29.60%), Postives = 180/402 (44.78%), Query Frame = 0
Query:   40 EDEPVLRTTCDNCTVAKVKCNGARPCVRCTNKAISCEYTYKKRCGPKRRKGKEAEAARARASSDTEGLLASCRSRGKGSGRSGGHLDKAMGSMSVVIGKEEAECVRVFMQNVNAFTPLTTLETVKQAANAGSGAAARSGGEGAHQKPQP--------QNEEADQKHHARKAVLHGAIAVGAEFLEMEEASQTHAQIARQEIKECFDAAEPELVGAYLILALYWMHQMDSVKIARYIGLAHQSNGIISKPPPELVSSLTFISVILFDAHVVSTVGCCVDPPGPTLSPSARASPVA-SQERVLKILSFVLLAIRNCVDPTNDPTLSTGEW--NAVALARHVDNAKALLDGASGPNDMARCVVVMLQAYFLLLRDDHRKAV-VITEPLADLVADNPLVLHLPIVW 429
            +DE   RTTCD CT+ K+KC+G  PC RC  +   C Y  KKRCGPKRRK        +R  SD +G            G   GHL +      V+  +E+ E +  F  +VN F PLT +  ++ A N                 P P         +E  +  +HARKAVL G +AVGA F   + ++  +   A+  +K+CFDA  PE+V  YL++ +Y +H +D  K+ RYIG A Q+   +++     V      S+ +    +  T    + P    L       P   S  R++ + S VLL +    D       S  +       L    + A+ LL     P   A  V+  L+ YFLL++   +  +  +  P+A  +  +P VL+ P+ W
Sbjct:   50 DDENNFRTTCDACTLGKIKCDGGHPCRRCQRRGSECVYREKKRCGPKRRK------LSSRDDSDDDGNHV---------GSVAGHLGEGGAGFRVLTSREQ-EFLAKFYSSVNKFIPLTCVTVIRDAMN-----------------PLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFSGDQASAGAYMSRAQIHLKDCFDALIPEVVNCYLVMVVYHLHFLDRSKVYRYIGFAQQACRELAQSNKLGVGGHVRDSLRVLSTFLHVTCNKEIRPEEVDLRGETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQQPVPTMATLGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMKGKEQAVLDAVAMPVAKALEADPAVLNFPLCW 418          
BLAST of mRNA_H-paniculata_contig4467.11263.1 vs. uniprot
Match: A0A835YRF7_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRF7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.410e-16
Identity = 87/302 (28.81%), Postives = 134/302 (44.37%), Query Frame = 0
Query:   45 LRTTCDNCTVAKVKCNGARPCVRCTNKAISCEYTYKKRCGPKRRK--------------GKEAEAARARASSDTEGLLASCRSRGKGS----GRSGGHLDKAMGSMS------------VVIGKEEAECVRVFMQNVNAFTPLTTLETVKQAANAGS--GAAARSGGEGAHQKPQPQNEEADQKHHARKAVLHGAIAVGAEFLEMEEASQTHAQIARQEIKECFDAAEPELVGAYLILALYWMHQMDSVKIARYIGLAHQSNGIISKPPP----ELVSSLTFISVILFDAHVVSTVGCCVDP 310
            LRTTCD CTV+KV+CNG +PC RC  +   C Y+ K+R  P                  G E+     R  S  +G  A   S    S    G + G +    G+ S            VV+  +E   +  F+  +N+F  + +  T+++A          A + G+ A     P+  E   + HA KAVL G++A+GA +              R  +++CFDA  PE    YL+L LY +H +DS ++ RY+G A QS   +S        E+ +++  +S +L   HV       +DP
Sbjct:   83 LRTTCDGCTVSKVRCNGKKPCARCERRNEECVYSEKRRQKPAGAPRVPVVVTVPPIGAVGGESTKYADRRPSSEDGAPAVTVSAPYPSVHINGAAHGQIPAVAGTPSPQTVPSQQSAAAVVLSADEQRFLSAFLSTINSFMRVASAATLREAMLPAPLLDVTALAMGQTA-----PREREIS-RFHACKAVLLGSVALGAMYCXXXXXXXXXXXXXRAHLRDCFDAVIPETAACYLLLVLYHVHVLDSARMFRYMGFAQQSFAELSLQVQAANCEISAAIALLSALL---HVSCDSAISLDP 375          
BLAST of mRNA_H-paniculata_contig4467.11263.1 vs. uniprot
Match: D8LQH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH3_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 4.810e-5
Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = 0
Query:  199 ARKAVLHGAIAVGAEFL-EMEEASQTHAQIARQEIKECFDAAEPELVGAYLILALYWMHQMDSVKIARYIGLAHQSN-GIISKPPPELVSSLTFISVIL 295
            A +A    A AVGA+F    EE  + +   A   +  C DA  PE+    L+L L+WMH M++ K+ARY G A Q    + S  P EL  ++ F++ ++
Sbjct:  155 ACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLV 253          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4467.11263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JIQ1_9PHAE1.150e-15855.16Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
D7G645_ECTSI9.700e-4129.67Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5J8L2_9PHAE2.700e-3930.04Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G644_ECTSI7.610e-3629.60Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A835YRF7_9STRA6.410e-1628.81Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LQH3_ECTSI4.810e-535.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 43..77
e-value: 7.9E-6
score: 27.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 45..83
NoneNo IPR availablePANTHERPTHR31845FAMILY NOT NAMEDcoord: 16..603
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 48..75
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 48..77
score: 9.677

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4467contigH-paniculata_contig4467:4642..12314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4467.11263.1mRNA_H-paniculata_contig4467.11263.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4467 4448..13252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4467.11263.1 ID=prot_H-paniculata_contig4467.11263.1|Name=mRNA_H-paniculata_contig4467.11263.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=801bp
MFPTTTQLGKHSNMATPPGNQQQQRPQPKKRRRRRRDGEEDEPVLRTTCD
NCTVAKVKCNGARPCVRCTNKAISCEYTYKKRCGPKRRKGKEAEAARARA
SSDTEGLLASCRSRGKGSGRSGGHLDKAMGSMSVVIGKEEAECVRVFMQN
VNAFTPLTTLETVKQAANAGSGAAARSGGEGAHQKPQPQNEEADQKHHAR
KAVLHGAIAVGAEFLEMEEASQTHAQIARQEIKECFDAAEPELVGAYLIL
ALYWMHQMDSVKIARYIGLAHQSNGIISKPPPELVSSLTFISVILFDAHV
VSTVGCCVDPPGPTLSPSARASPVASQERVLKILSFVLLAIRNCVDPTND
PTLSTGEWNAVALARHVDNAKALLDGASGPNDMARCVVVMLQAYFLLLRD
DHRKAVVITEPLADLVADNPLVLHLPIVWVAISCVRALLDSATRTIAVER
LESAMEPLAPRLAFASQESVVGRELLRVFNKKKDRGTRNGAGAGVASSSA
PSRTPTAESILIRQSRVQTSSLNVTASDVHHPRPSVVDLLPVEPSPAPQR
RGPPKLLRDSRSMDSGGGTLSASLLSETLASSNKSIRSSSAPAQHSSRLG
PGPGSGPGLLNPEPLPFGRAAVSMLQLDSSSYGGSSFMGTAVPDVHVSES
QSRDMAEDEDEMKAEMAESVEAGGGEAGREEDVSGGEDLYGGIDPKLLSG
ARGLISRQHQQQSFNANEEMLEGIDSKMVTDARDLISRQHMQQSFNANAA
VSLEQVESNLTQLRVSSDGEGRPALGRRINSLDLEAAADKLLEARSSFIS
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd