mRNA_H-paniculata_contig4465.11262.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XTU6_ORYSJ) HSP 1 Score: 215 bits (548), Expect = 1.070e-54 Identity = 233/771 (30.22%), Postives = 336/771 (43.58%), Query Frame = 3
Query: 144 VFEMTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYVI----HRGQLEDDRTRDM-----EGLFSVQSVTPAVTRSRAQGERRDVTNMEKQRQRRQPPAPTRT-----------AP*VMTIVMETAMTGR*KMLNQNPKKHHWRRQVRPHLGGRPGQSQGRR-SGDREIGHQT*YGRERGKTAKKIQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADK---WRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*PQAERPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*K-VDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLTSVEACPP----------L*RE-----T*RVWHLTAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRY--------TKQHVVWTTMSGRLPYMQADFSLSQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLF-ENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLR 2306
V R + + R+ EA A VY LNR+PT+ +G T YE WHG P ++HLRVFG + YV + +L+D TR + +G + + P R RDV E + P T +P ++ TG +P L P G + + +T G R + + I + T L+ Y + + + EA+K WR AM EE R++ +N T + LP G KAI K ++K K G++ ++KARLVA+GY Q +G DF E APVARM T+R +V+LAA+ +E MDV +A+LN +EE ++V PP F + ++ QA R N LD+ L+ + +S T+ Y GD+ ++V V+VDDL+ITG K +D FK +RF M DLG LS LGMEV G I SA K T +E C P L +E + + VG + +NT DL Y Y T +H W + L Y+ C R + + L R V R W S+KQ++V SS E EY+A A ++L L+ + G TTL +NK+AINL K H R+KHI R+H IRE ++ + ++YV + +QLAD+LTK + RV+F+ LR
Sbjct: 687 VVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVS---RDVVFDETATWAWRDPEDAATEEEEFTVDFFVSPVAPSVADAGEQTGTPVQAGVSPVSTGV-------LSSPPRAPNGEFCTPPTSVTPETDGGPVRYRRVQDILST--------TEPVLDFDYSDQCLIATEEPTSFVEAEKHECWRRAMVEELRSVEENQTWSLAE---LPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFDDKTNASKVLKLRKALYGLRQAPRAWNAKLDNTLLSLKFNKSATESAVYVRG--VGDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSDLGFLSYYLGMEV---VQKGE-GIFLSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSKEGTGECVDPTEYRSIVGSLRYLVNTRP------------DLAYSVGYVSRFMEKPTSEH--WAAVKHILRYISGTIKTG--CWYGREEVGNAKLVGFSDSDMAGDLDDRKSTTGVLFRYGGSLISWQSQKQKVVALSSCEAEYIAATTAACQGIWLSRLIAELLDAEPGQTTLMIDNKSAINLCKNPVFHDRSKHIDTRYHFIRECVEKKQIAVEYVCSEDQLADLLTKPVGRVRFKELR 1414
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A151TIQ1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TIQ1_CAJCA) HSP 1 Score: 211 bits (537), Expect = 4.510e-54 Identity = 209/749 (27.90%), Postives = 325/749 (43.39%), Query Frame = 3
Query: 144 VFEMTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYV----IHRGQLEDDRTRDMEGLFSVQSVTPAVTRSRAQGERRDVTNMEKQRQRRQPPAPTRTAP*VMTIVMETAMTGR*KMLNQNPKKHHWRRQVRPHLGGRPGQSQGRRSGDREIGHQT*YGRERGKTAKKIQALPCAWLKWKTL----AALEGRYLRKSQKSALKALKSPEADK---WRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*PQAERPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*K-VDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLTSVEACPPL*RET*RVWHLTAVGEVV---IHLNTEAW*DHSCTARQEL----DLIYHTRYTKQHVVWTTMSGRLPYMQAD------FSLSQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCR-GSTTLFENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRN 2309
+ M R + T + +R+ EA +Y LNR P R + T E W G P + HLR+FG + Y +HR +L+D R + + T A V N Q+ ++ + + N + RQ HL D +I Q GK ++++ P ++ EG + + + ++ + EA K W AM EE R++ KN T + LP+G+KAI + ++K KL G VA+YKARLVA+G+ Q +G D+ E APVAR+ T+R VVS+A+ H + MDV +A+LN P+EE +FV PP F + R QA R N +D FL+ +G + TT+ Y D ++V ++VDDL++TG K +D FK D F M DLG LS LG+E + M S+ T+ + +L P+ +T + ++V ++ + C R ++ L+ T + + L Y + F C P H + CG R + WCSRKQ +V SS E EY+A ++L LL + G + +NK++INL+K AH R+KHI R+H +R+ + L+L++ ++ +Q+ADILTK L + +F+ LRN
Sbjct: 157 ILNMARSMLKTKKLPKRFWGEAVSTAIYILNRCPARRLDEITPEEAWSGLKPDVSHLRIFGSICYKHVPDVHRKKLDD---RGEKLILLGYHSTGAYK----------VYNPLTQKM----------------MLCRDLKIDETQQWDWNDRSDDLGRQTIIHL-------------DEDIEQQPEAEIHNGKRPQRMRQTPQRLSDYEVFLDSQVTTEGDLVHMALSAEMEPVSFEEAVKETHWMEAMREELRSIEKNQTWKLTP---LPMGKKAITVRWVYKVKLNSKGEVAKYKARLVAKGFLQRQGLDYDEVFAPVARLETIRLVVSMASYHCWPIHQMDVKSAFLNGPLEEEVFVSQPPGFEIKGKKKQVYRLHKALYGLKQAPRAWNKRIDSFLLQLGFVKCTTEYGVYTKGLNMTDL-LIVCLYVDDLLVTGSKAKEIDAFKQDMKAEFEMNDLGKLSYFLGIEFKETKGGIFMHQSKYTTDVLERFQMLNCNPVSTPV--DTGNTLDKSEGDQMVDKTLYRQMVGSLRYVCNTRPDIAYGVGLVSRYMETPKQFHLLAVKRLLRYAKGTIGYGLMFPNKFSC--PNHNMVGYSDADWCGD-----KADRKSTTGYVFMLGDAPISWCSRKQSVVPLSSCEAEYIAASMGACQALWLETLLEELKIETEEGMLLMVDNKSSINLAKNPVAHGRSKHIETRFHFLRDQISKRKLKLEFCRSESQIADILTKPLKKERFEELRN 850
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 203 bits (516), Expect = 2.880e-53 Identity = 167/531 (31.45%), Postives = 262/531 (49.34%), Query Frame = 3
Query: 804 SALKALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKP-----V*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFS--RNEEGDTD-ILVAVHVDDLVITGRH*KVDDFKHDK-SRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLT--SVEACPPL*RET*RVWHLT--------------AVGEVVIHLNTEAW*DHSCTARQELDLIYHTRYTKQHVVWTTMSGRLPYMQADFSLS-QYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLFE-NKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRNFL 2315
S +AL A KW+ A++EE+ +L+ N T E P P G I +K + K K DG+V R+KARLVAQGYSQ G ++ E +PVAR S++RT+++LA +H+ E MDV A+LN +E +++ P F D ++CK + A + TLD FL G ++S D C Y +N+ G +++AV+VDD++ + + + D + F M D G + +LGM ++RD T+ ISQ RY ++VL + C P+ +H A+G + +++T D S A + Y + +K+H W + L Y++ + ++ E + + R ++ WCS+KQ VT S+ E EYVA +A + +++R LL IG TT++E N+ AI +SK + H RTKHI VR+H +RE +++ Y T + LADI+TKGL++ FQRLR+ L
Sbjct: 16 SISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFV----DQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQ---QRY-LESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGRLT-YISTATRPDIS--AAVSILSSYMSNPSKEH--WNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 530
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 208 bits (530), Expect = 2.130e-52 Identity = 178/577 (30.85%), Postives = 283/577 (49.05%), Query Frame = 3
Query: 723 IQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRD--IPFVRHLC---KKPV*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*KVDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ-----GTSARY*KDTV-----------LTSVEACPPL*RE---T*RVWHLTAVGEVVIH-LNTEAW*DHSCTARQEL-------------DLIYHTRYTKQH--VVWTTMSGRLPYMQADFSLSQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSI------GFGCRGSTTLFENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRNFL 2315
I A+P A+ A EG+ R S +A++SP+ +W+ A+E+E R L + T + +P P + +K +F+ K +G + YKARLVAQG+SQ+ G DF +T APVA+++++R +++LAA HD++ MDV AYLNA +EE +F+K PP + ++ + +RH K+ ++ LD+ +GL RS D C ++ ++ +++A+ VDD I G + V FK + S+RF M DLG + +LG+EVRRD T+S+SQ G AR+ + + S+ CP RE V + A+G ++ L T + TA + ++ + + T++ T +G + AD+ S++ RH I CG + I A W ++KQ +V SS E EY+A A K +++R LL I F R T +N++AI L+K ++ H RTKHI +R+H IRE + L Y +T + ADI TK L RVK + L + +
Sbjct: 945 IFAMPAAF------AVREGQEPR----SLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEP---PENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDE----MGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNGVEGFSDADWGSSEH----RHSI--------CGYVF---------------LIDGGAVSWSAKKQPVVALSSTEAEYIALTHAAKEAIWVRYLLADILDPDVSKFALRLHT---DNRSAIALAKDNAYHARTKHIDIRYHFIREAVDSAAISLLYRRTEDMPADIFTKSLPRVKVEYLTSLM 1474
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 200 bits (508), Expect = 4.930e-52 Identity = 174/528 (32.95%), Postives = 254/528 (48.11%), Query Frame = 3
Query: 825 SPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKK--PV*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*KVDDFKHDKSR---RFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLTSVEACPPL*RET*RVWHLTAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRYTKQ--HVVWTTMSGRLPYMQADFSLSQYCV*PRH-----------YIR-R*E*WRRCGRIC**RLGGRCR---GPKVHNR--------IRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLF-ENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRNFL 2315
S E +W AA+E+E + K GT E + P G + + +FK K G++A+YKARLVAQG+SQ+ G D+ +T APVA++S++R + +LAA D+E MDV AYLN +EE +F+K PP F P V HL K + R L + +G RS+ D +F G+ I VAV VDDL I VD+ H KS +F M DLG + +LG+E++RD T+S+ Q R DT+L+ LT + L T D S + Q+ D + + Y + +++ + R A +LSQ+ P H Y++ E W G + G G H R I A W S+KQ +V SS E EYVA A K ++ R LG I TTL+ +N++AI L+K + H RTKHI +R+H IR+ +++ Y T + AD+LTK L+R K +++R +
Sbjct: 39 SGEWPQWEAAIEDELGRMKKMGTWELAEK---PPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGF-PTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAI-VAVSVDDLAIAAN--SVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQ----RAYIDTILSRFNLQDAK--------SLTTAIDPSFSLTT----DQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDNANGMEGFSDADWGSSDHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEKMRGLI 543
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 206 bits (524), Expect = 1.070e-51 Identity = 215/786 (27.35%), Postives = 338/786 (43.00%), Query Frame = 3
Query: 144 VFEMTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYVIHRGQLE---DDRTR---------DMEG--LFSVQS----------------------VTPAVTRSRAQGERRDVTNMEKQRQRRQPPAPTRTAP*VMTIVMETAMTGR*KMLNQNPKKHHWRRQVRPHLGGRPGQSQGRRSGDREIGHQT*YGRERGKTAKKIQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKP-----V*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFS--RNEEGDTD-ILVAVHVDDLVITGRH*KVDDFKHDK-SRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLT--SVEACPPL*RET*RVWHLTAVGE-------------VVIHLNTEAW*DHSCTARQELDLIYHTRYTKQHVVWTTMSGRLPYMQADFSLS-QYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLFE-NKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRNFL 2315
+ E + I NM + EA VY NR+PT N +T YE W P + +L+VFG + ++ L D R+R D +G L+ ++S + R E+ V + + Q P PT V I E + + ++ K + + R+R K KK C + T E + S +AL A KW+ A++EE+ +L+ N T E P P G I +K + K K DG+V R+KARLVAQGYSQ G D+ E +PVAR S++RT+++LA +H+ E MDV A+LN +E +++ P F D ++CK + A + TLD FL G ++S D C Y +N+ G +++AV+VDD++ + + + D + F M D G + +LGM ++RD T+ ISQ +Y ++VL + C P+ +H E + +++T D S A + Y + +K+H W + L Y++ + ++ E + + R ++ WCS+KQ VT S+ E EYVA +A + +++R LL IG TT++E N+ AI +SK + H RTKHI VR+H +RE +++ Y T + LADI+TKGL++ FQRLR+ L
Sbjct: 545 LMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVRSKDVVFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPT-----VPDIEDEENLPAVGESYEESFMKQVENLETK---------------------------RQR-KAPKKFSPDECNITESLTAENEEPQ-------SISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFV----DQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQ---QKY-LESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGCLTYISTATRPDIS--AAVSILSSYMSNPSKEH--WNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 1275
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A0V0T740_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Trichinella TaxID=6333 RepID=A0A0V0T740_9BILA) HSP 1 Score: 206 bits (524), Expect = 1.260e-51 Identity = 212/774 (27.39%), Postives = 352/774 (45.48%), Query Frame = 3
Query: 144 VFEMTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYVIHRGQLEDD-RTRDMEGLFSVQSVTPAVTRSRAQGER-----RDVTNMEK---QRQRRQPPAPTRTAP*VMTIVMETAMTGR*KMLNQNPKKH--------HWRRQVRP--HLGGRPGQSQGRRSGDREIGHQT*YGRERGKTAKKIQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKP---------V*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVI-TGRH*KVDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KD-----------TVLTSVEA--------CPPL*RET*RVWHL---TAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRYTKQHVVWTTMSGRLPYMQADFSLSQYCV*PRHYIRR*E*WRRCGRIC**R---LGGRCRGPKVHN----RIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLFENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVK 2291
+ +++R ++ + + + EA Y NR P++ NGE W+G L++ R FG AYV+ + + TR E +F S R ER RDV K QP A + P T ET N++ H + QV + PG+ + RSG R GR + K +K + P ++A + KS +AL E+ +W AM+ E+ AL+KN T E + P +K + + ++ K DGS+ + KARLVA+G+ Q DF ET APVAR+S++RT+++++A + +D +AYLN +EE +++++P + + ++L K + + LD+ L GL+ ++ DPC YF R G + A++VDD++I + ++ ++++ K ++ F MKD+G + LG+E++++ NG + +SQ +Y D TV T ++A CP E + + + VG ++ +L+ D + L ++ Y QH WT L Y++ S Y R + R G + GG + + + A W SRKQ+ V SS E EY+A EA K ++L+ ++G I C+ +N++A+ L++ H RTKHI +R+H IRE A + +EL+Y+ TG +AD+LTKGL + K
Sbjct: 781 LLDISRCMLLESKLSLNFWAEAISTACYIRNRCPSKSLNGEIPLTLWNGRKLTLNYFRTFGEKAYVLDKSPGKGKFSTRSKECIFIGYSTESKAYRLWCPAERKVLRSRDVKFTGKFGNDETLHQPTAQNQEWPANDTCEKETETLELQLTTNESNDTHQSGGTLVQNEAEQVTETRKMKVLPGRPRLVRSGRR--------GRPK-KVYRKEEVQPVTCGNVASIAEMN------DPKSVTEALSCRESKEWLEAMKREYEALVKNNTWEIVN---RPQRQKVVACQWVYNTKFNADGSIKQRKARLVAKGFLQRPNIDFHETYAPVARLSSIRTILAISANYGLIAHQLDFVSAYLNGEIEEEIYMEIPEKLDEVLKCSKVKQNLDGKVCRIRKALYGLKQSGRQWYRKLDEKLSQYGLKATSGDPCVYFERR--GRELTIAAIYVDDVIIASNKNARLNELKKALAKSFEMKDMGPIHYCLGIEIKQNA-NGDIEMSQ---RKYIMDILERFRMMDSKTVETPIDASNKLSAEMCPRTETEKAEMQNTPYRSLVGSLM-YLSVSTRPDIAFAV--SLLSQFNENYGSQH--WTAAKRVLRYLKKTAS----------YGLRFQ--RNSGALMGFSDADWGGNSDDRRSYTGYVFKFGNAAISWESRKQRTVALSSTEAEYMALSEACKEVIHLKQMIGEITGLCKSVVLQSDNQSALKLARNPVFHARTKHIDIRYHFIREAAERKDVELRYLPTGQMVADVLTKGLFKPK 1513
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: Q7G6A8_ORYSJ (Os10g0130700 protein n=3 Tax=Oryza sativa TaxID=4530 RepID=Q7G6A8_ORYSJ) HSP 1 Score: 206 bits (523), Expect = 1.590e-51 Identity = 224/754 (29.71%), Postives = 340/754 (45.09%), Query Frame = 3
Query: 204 EAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYVI----HRGQLEDDRTRDM-----EGLFSVQSVTPAVTRSRAQGERRDVTNMEKQRQRRQPPAPTRTAP*VMTI-VMETAMTGR*KMLNQNPKKHHWRRQVRPHLGGRPGQSQGRRSGDREIGHQT*Y---------GRERGKTA-KKIQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADK---WRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*--PQAERPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*-KVDDFKHDKSRRFRMKDLGSLSRVLGMEV-RRDCPNGTMSISQGTSARY*KDTVLTS-------VEACPPL*RET*-----RVWHLTAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRY--------TKQHVVWTTMSGRLPYMQADFSLSQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAK----RWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTL-FENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLR 2306
EA A VY LNR+PT+ NG T +E WHG P ++HLRVFG + YV + +L+D TR + +G + + P R RDV E + P T T+ + L + P GG S E+ + G G +++Q + A T L+ Y + ++ + + EA++ WR AM+EE +++ N T + LPVG KAI K ++K K G V ++KARLVA+GY Q +G DF E APVARM T+R ++++AA +E MDV +A+LN +EE ++V PP F ++ +R KK + QA R N L + L+ + +S T+ Y G + ++V V+VDDL+I+G ++D FK + ++FRM DLG LS LGMEV ++D +G +A+ + T + +EA L RE+ + + VG + +NT DL Y Y T +H W + L Y+ + + + RR + R + G K + W S+KQ++V SS E EY+A ++L LL + G T + +NK+AINL K H R+KHI R+H IRE ++ + ++YV+T +QLADILTK + RV+F LR
Sbjct: 707 EAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVS---RDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQAST--------PVQGGTYPASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRYRRVQDILSA-----TEPVLDFDYSDQCLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAE---LPVGHKAIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLR--LKKALYGLKQAPRAWNAKLHNTLISLNFIKSETESAVYVRGT--GSSRLIVGVYVDDLIISGAQASEIDFFKEEMKKKFRMSDLGLLSYYLGMEVVQKD--DGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESGGEGVDSTMYRSTVGSLRYLVNTRP------------DLAYSVGYVSRFMEKPTSEH--WAAVKHILRYIAGTLDVGCW------FGRREKGELRLIGFSDSDMAGDLDDRKSTTGVLYMLGDSLISWQSQKQKVVALSSCEAEYIAATTGACQGIWLNRLLAELLGEDPGQTVMKVDNKSAINLCKNPVLHDRSKHIDTRFHFIRECVEKKQIAVEYVRTEDQLADILTKPVGRVRFLELR 1415
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 199 bits (505), Expect = 2.190e-49 Identity = 173/525 (32.95%), Postives = 254/525 (48.38%), Query Frame = 3
Query: 816 ALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*-PQAERP-DNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDD-LVITGRH*KVDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLTSVEACPPL*RET*RVWHLTAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRYTKQHVVWTTMSGRLPYMQADFSLSQYCV*P--RHYIRR*E*WRRCGRIC**RLG--GRCRGPK-------------VHNRIRIQ---------AKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLF-ENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQR 2300
A+ P+A +W+AA EE A +K E D P RK I K +FK K DG + +YKARLVA+G++QVEG DF ET APVA+ +++RT+++LAA+ D E MDV +A+LN ++E +++K+P S F R + L K QA R + +G R +D ++ +N++G +++A++VDD L+++ V K D RF M DLG +LGME+ RD P + +SQ K + C P+ + L + E I D L+Y T+ + +T +LSQ+ P H+I +R +L G + K V+NR + A W S++Q SS E EY+AG K V+LR L IG +G T L +N++AI LSK ++ H RTKHI VR+H IRE +E +YV TGNQ+AD+LTKGL R K ++
Sbjct: 609 AMSRPDAARWKAACAEELHAFVKA---ELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVP---SGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFY-KNDDGIL-LIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVE--KCLAQHGMANCRPVSTPMAQNQKLVKLSEAEI--------DPKPYQSALGSLMYAMIGTRPDLAFTVG-----------ALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKKPLLRYVDADWAANVNNRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRAFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHEK 1104
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 197 bits (500), Expect = 1.170e-48 Identity = 166/529 (31.38%), Postives = 267/529 (50.47%), Query Frame = 3
Query: 816 ALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*--PQAERPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTD--ILVAVHVDDLVITGRH*KV-DDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLT--SVEACPPL*R--ET*RVWHLTAVGEVVIHLN---------TEAW*DHSCTARQELD-----LIYH-TRYTKQHVVWTTMSGRLPYMQA--DFSL----SQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLFE-NKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLR 2306
AL SP A+ W+ A++ E+ +L++N T + + +P + + +K +FK K DG + R KARLVAQGYSQ G D+ + APVA+ +++R+V+++ E D E MDV A+LN +EE +F+K P F +RD P + +K + Q+ R N +D+FL G R+ DPC Y + +GD ++VAV+VDDL+I + ++ + K RF M+D + +LGM+V+RD N ++I Q +VL ++ C P+ E + A E ++ L T A S R ++ L H ++ KQH W + L Y++ D+ L S+ H + W G I R ++ W S++Q +V S E EYVA +A + ++LR L + F T +FE N+ AI L+K H RTKHI +++H +R+ +++++L+Y T +AD+LTKGL R +F++LR
Sbjct: 782 ALSSPNAELWKDAIQNEYDSLIENETWKLVE---MPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFL----SSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLKDYQSAIGCLTYA----SIGTRPDISAAVGVLSQHMSKPGKQH--WIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADAD-W--AGDI-----DTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEKLR 1287 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4465.11262.1 >prot_H-paniculata_contig4465.11262.1 ID=prot_H-paniculata_contig4465.11262.1|Name=mRNA_H-paniculata_contig4465.11262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp MTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKback to top mRNA from alignment at H-paniculata_contig4465:2115..4662- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4465.11262.1 ID=mRNA_H-paniculata_contig4465.11262.1|Name=mRNA_H-paniculata_contig4465.11262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2548bp|location=Sequence derived from alignment at H-paniculata_contig4465:2115..4662- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4465:2115..4662- >mRNA_H-paniculata_contig4465.11262.1 ID=mRNA_H-paniculata_contig4465.11262.1|Name=mRNA_H-paniculata_contig4465.11262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig4465:2115..4662- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |