mRNA_H-paniculata_contig4465.11262.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4465.11262.1
Unique NamemRNA_H-paniculata_contig4465.11262.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XTU6_ORYSJ)

HSP 1 Score: 215 bits (548), Expect = 1.070e-54
Identity = 233/771 (30.22%), Postives = 336/771 (43.58%), Query Frame = 3
Query:  144 VFEMTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYVI----HRGQLEDDRTRDM-----EGLFSVQSVTPAVTRSRAQGERRDVTNMEKQRQRRQPPAPTRT-----------AP*VMTIVMETAMTGR*KMLNQNPKKHHWRRQVRPHLGGRPGQSQGRR-SGDREIGHQT*YGRERGKTAKKIQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADK---WRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*PQAERPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*K-VDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLTSVEACPP----------L*RE-----T*RVWHLTAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRY--------TKQHVVWTTMSGRLPYMQADFSLSQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLF-ENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLR 2306
            V    R  +    +  R+  EA  A VY LNR+PT+  +G T YE WHG  P ++HLRVFG + YV     +  +L+D  TR +     +G  + +   P   R       RDV   E      + P    T           +P   ++      TG       +P            L   P    G   +    +  +T  G  R +  + I +         T   L+  Y  +   +  +     EA+K   WR AM EE R++ +N T    +   LP G KAI  K ++K K    G++ ++KARLVA+GY Q +G DF E  APVARM T+R +V+LAA+  +E   MDV +A+LN  +EE ++V  PP F   +     ++         QA R  N  LD+ L+ +   +S T+   Y      GD+ ++V V+VDDL+ITG   K +D FK    +RF M DLG LS  LGMEV      G   I    SA   K    T +E C P          L +E          + + VG +   +NT              DL Y   Y        T +H  W  +   L Y+         C   R  +   +            L  R     V  R       W S+KQ++V  SS E EY+A   A    ++L  L+  +     G TTL  +NK+AINL K    H R+KHI  R+H IRE   ++ + ++YV + +QLAD+LTK + RV+F+ LR
Sbjct:  687 VVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVS---RDVVFDETATWAWRDPEDAATEEEEFTVDFFVSPVAPSVADAGEQTGTPVQAGVSPVSTGV-------LSSPPRAPNGEFCTPPTSVTPETDGGPVRYRRVQDILST--------TEPVLDFDYSDQCLIATEEPTSFVEAEKHECWRRAMVEELRSVEENQTWSLAE---LPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFDDKTNASKVLKLRKALYGLRQAPRAWNAKLDNTLLSLKFNKSATESAVYVRG--VGDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSDLGFLSYYLGMEV---VQKGE-GIFLSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSKEGTGECVDPTEYRSIVGSLRYLVNTRP------------DLAYSVGYVSRFMEKPTSEH--WAAVKHILRYISGTIKTG--CWYGREEVGNAKLVGFSDSDMAGDLDDRKSTTGVLFRYGGSLISWQSQKQKVVALSSCEAEYIAATTAACQGIWLSRLIAELLDAEPGQTTLMIDNKSAINLCKNPVFHDRSKHIDTRYHFIRECVEKKQIAVEYVCSEDQLADLLTKPVGRVRFKELR 1414          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A151TIQ1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TIQ1_CAJCA)

HSP 1 Score: 211 bits (537), Expect = 4.510e-54
Identity = 209/749 (27.90%), Postives = 325/749 (43.39%), Query Frame = 3
Query:  144 VFEMTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYV----IHRGQLEDDRTRDMEGLFSVQSVTPAVTRSRAQGERRDVTNMEKQRQRRQPPAPTRTAP*VMTIVMETAMTGR*KMLNQNPKKHHWRRQVRPHLGGRPGQSQGRRSGDREIGHQT*YGRERGKTAKKIQALPCAWLKWKTL----AALEGRYLRKSQKSALKALKSPEADK---WRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*PQAERPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*K-VDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLTSVEACPPL*RET*RVWHLTAVGEVV---IHLNTEAW*DHSCTARQEL----DLIYHTRYTKQHVVWTTMSGRLPYMQAD------FSLSQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCR-GSTTLFENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRN 2309
            +  M R  + T  + +R+  EA    +Y LNR P R  +  T  E W G  P + HLR+FG + Y     +HR +L+D   R  + +      T A            V N   Q+                 ++         +  + N +     RQ   HL             D +I  Q       GK  ++++  P     ++         EG  +  +  + ++ +   EA K   W  AM EE R++ KN T +      LP+G+KAI  + ++K KL   G VA+YKARLVA+G+ Q +G D+ E  APVAR+ T+R VVS+A+ H +    MDV +A+LN P+EE +FV  PP F    +     R         QA R  N  +D FL+ +G  + TT+   Y       D  ++V ++VDDL++TG   K +D FK D    F M DLG LS  LG+E +       M  S+ T+    +  +L       P+  +T      +   ++V   ++        + C  R ++     L+     T +      +   L Y +        F     C  P H +        CG         R         +      WCSRKQ +V  SS E EY+A        ++L  LL  +      G   + +NK++INL+K   AH R+KHI  R+H +R+   +  L+L++ ++ +Q+ADILTK L + +F+ LRN
Sbjct:  157 ILNMARSMLKTKKLPKRFWGEAVSTAIYILNRCPARRLDEITPEEAWSGLKPDVSHLRIFGSICYKHVPDVHRKKLDD---RGEKLILLGYHSTGAYK----------VYNPLTQKM----------------MLCRDLKIDETQQWDWNDRSDDLGRQTIIHL-------------DEDIEQQPEAEIHNGKRPQRMRQTPQRLSDYEVFLDSQVTTEGDLVHMALSAEMEPVSFEEAVKETHWMEAMREELRSIEKNQTWKLTP---LPMGKKAITVRWVYKVKLNSKGEVAKYKARLVAKGFLQRQGLDYDEVFAPVARLETIRLVVSMASYHCWPIHQMDVKSAFLNGPLEEEVFVSQPPGFEIKGKKKQVYRLHKALYGLKQAPRAWNKRIDSFLLQLGFVKCTTEYGVYTKGLNMTDL-LIVCLYVDDLLVTGSKAKEIDAFKQDMKAEFEMNDLGKLSYFLGIEFKETKGGIFMHQSKYTTDVLERFQMLNCNPVSTPV--DTGNTLDKSEGDQMVDKTLYRQMVGSLRYVCNTRPDIAYGVGLVSRYMETPKQFHLLAVKRLLRYAKGTIGYGLMFPNKFSC--PNHNMVGYSDADWCGD-----KADRKSTTGYVFMLGDAPISWCSRKQSVVPLSSCEAEYIAASMGACQALWLETLLEELKIETEEGMLLMVDNKSSINLAKNPVAHGRSKHIETRFHFLRDQISKRKLKLEFCRSESQIADILTKPLKKERFEELRN 850          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 203 bits (516), Expect = 2.880e-53
Identity = 167/531 (31.45%), Postives = 262/531 (49.34%), Query Frame = 3
Query:  804 SALKALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKP-----V*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFS--RNEEGDTD-ILVAVHVDDLVITGRH*KVDDFKHDK-SRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLT--SVEACPPL*RET*RVWHLT--------------AVGEVVIHLNTEAW*DHSCTARQELDLIYHTRYTKQHVVWTTMSGRLPYMQADFSLS-QYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLFE-NKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRNFL 2315
            S  +AL    A KW+ A++EE+ +L+ N T E   P   P G   I +K + K K   DG+V R+KARLVAQGYSQ  G ++ E  +PVAR S++RT+++LA +H+ E   MDV  A+LN  +E  +++  P  F     D     ++CK       +   A   + TLD FL   G ++S  D C Y    +N+ G    +++AV+VDD++       + + + D   + F M D G +  +LGM ++RD    T+ ISQ    RY  ++VL    +  C P+       +H                A+G +  +++T    D S  A   +   Y +  +K+H  W  +   L Y++   +   ++           E +          +  R        ++      WCS+KQ  VT S+ E EYVA  +A +  +++R LL  IG      TT++E N+ AI +SK +  H RTKHI VR+H +RE      +++ Y  T + LADI+TKGL++  FQRLR+ L
Sbjct:   16 SISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFV----DQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQ---QRY-LESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGRLT-YISTATRPDIS--AAVSILSSYMSNPSKEH--WNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 530          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 208 bits (530), Expect = 2.130e-52
Identity = 178/577 (30.85%), Postives = 283/577 (49.05%), Query Frame = 3
Query:  723 IQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRD--IPFVRHLC---KKPV*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*KVDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ-----GTSARY*KDTV-----------LTSVEACPPL*RE---T*RVWHLTAVGEVVIH-LNTEAW*DHSCTARQEL-------------DLIYHTRYTKQH--VVWTTMSGRLPYMQADFSLSQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSI------GFGCRGSTTLFENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRNFL 2315
            I A+P A+      A  EG+  R    S  +A++SP+  +W+ A+E+E R L  + T +  +P   P     + +K +F+ K   +G +  YKARLVAQG+SQ+ G DF +T APVA+++++R +++LAA HD++   MDV  AYLNA +EE +F+K PP  +   ++  +  +RH     K+      ++    LD+    +GL RS  D C ++   ++    +++A+ VDD  I G +  V  FK + S+RF M DLG +  +LG+EVRRD    T+S+SQ     G  AR+  +             + S+  CP   RE      V +  A+G ++   L T      + TA  +               ++ + + T++       T +G   +  AD+  S++    RH I        CG +                 I   A  W ++KQ +V  SS E EY+A   A K  +++R LL  I       F  R  T   +N++AI L+K ++ H RTKHI +R+H IRE      + L Y +T +  ADI TK L RVK + L + +
Sbjct:  945 IFAMPAAF------AVREGQEPR----SLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEP---PENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDE----MGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNGVEGFSDADWGSSEH----RHSI--------CGYVF---------------LIDGGAVSWSAKKQPVVALSSTEAEYIALTHAAKEAIWVRYLLADILDPDVSKFALRLHT---DNRSAIALAKDNAYHARTKHIDIRYHFIREAVDSAAISLLYRRTEDMPADIFTKSLPRVKVEYLTSLM 1474          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 200 bits (508), Expect = 4.930e-52
Identity = 174/528 (32.95%), Postives = 254/528 (48.11%), Query Frame = 3
Query:  825 SPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKK--PV*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*KVDDFKHDKSR---RFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLTSVEACPPL*RET*RVWHLTAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRYTKQ--HVVWTTMSGRLPYMQADFSLSQYCV*PRH-----------YIR-R*E*WRRCGRIC**RLGGRCR---GPKVHNR--------IRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLF-ENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRNFL 2315
            S E  +W AA+E+E   + K GT E  +    P G   + +  +FK K    G++A+YKARLVAQG+SQ+ G D+ +T APVA++S++R + +LAA  D+E   MDV  AYLN  +EE +F+K PP F P       V HL K    +     R    L    + +G  RS+ D   +F     G+  I VAV VDDL I      VD+  H KS    +F M DLG +  +LG+E++RD    T+S+ Q    R   DT+L+                 LT   +    L T    D S +  Q+ D + +  Y +    +++  +  R     A  +LSQ+   P H           Y++   E W   G      + G      G   H R        I   A  W S+KQ +V  SS E EYVA   A K  ++ R  LG I       TTL+ +N++AI L+K +  H RTKHI +R+H IR+      +++ Y  T +  AD+LTK L+R K +++R  +
Sbjct:   39 SGEWPQWEAAIEDELGRMKKMGTWELAEK---PPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGF-PTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAI-VAVSVDDLAIAAN--SVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQ----RAYIDTILSRFNLQDAK--------SLTTAIDPSFSLTT----DQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDNANGMEGFSDADWGSSDHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEKMRGLI 543          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 206 bits (524), Expect = 1.070e-51
Identity = 215/786 (27.35%), Postives = 338/786 (43.00%), Query Frame = 3
Query:  144 VFEMTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYVIHRGQLE---DDRTR---------DMEG--LFSVQS----------------------VTPAVTRSRAQGERRDVTNMEKQRQRRQPPAPTRTAP*VMTIVMETAMTGR*KMLNQNPKKHHWRRQVRPHLGGRPGQSQGRRSGDREIGHQT*YGRERGKTAKKIQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKP-----V*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFS--RNEEGDTD-ILVAVHVDDLVITGRH*KVDDFKHDK-SRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLT--SVEACPPL*RET*RVWHLTAVGE-------------VVIHLNTEAW*DHSCTARQELDLIYHTRYTKQHVVWTTMSGRLPYMQADFSLS-QYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLFE-NKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLRNFL 2315
            + E  +  I   NM   +  EA    VY  NR+PT   N +T YE W    P + +L+VFG + ++     L    D R+R         D +G  L+ ++S                          + R     E+  V + +      Q P PT     V  I  E  +    +   ++  K     + +                           R+R K  KK     C   +  T    E +       S  +AL    A KW+ A++EE+ +L+ N T E   P   P G   I +K + K K   DG+V R+KARLVAQGYSQ  G D+ E  +PVAR S++RT+++LA +H+ E   MDV  A+LN  +E  +++  P  F     D     ++CK       +   A   + TLD FL   G ++S  D C Y    +N+ G    +++AV+VDD++       + + + D   + F M D G +  +LGM ++RD    T+ ISQ    +Y  ++VL    +  C P+       +H     E              + +++T    D S  A   +   Y +  +K+H  W  +   L Y++   +   ++           E +          +  R        ++      WCS+KQ  VT S+ E EYVA  +A +  +++R LL  IG      TT++E N+ AI +SK +  H RTKHI VR+H +RE      +++ Y  T + LADI+TKGL++  FQRLR+ L
Sbjct:  545 LMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNMKTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVRSKDVVFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPT-----VPDIEDEENLPAVGESYEESFMKQVENLETK---------------------------RQR-KAPKKFSPDECNITESLTAENEEPQ-------SISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFV----DQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNAEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQ---QKY-LESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDKNLYQQAIGCLTYISTATRPDIS--AAVSILSSYMSNPSKEH--WNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 1275          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A0V0T740_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Trichinella TaxID=6333 RepID=A0A0V0T740_9BILA)

HSP 1 Score: 206 bits (524), Expect = 1.260e-51
Identity = 212/774 (27.39%), Postives = 352/774 (45.48%), Query Frame = 3
Query:  144 VFEMTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYVIHRGQLEDD-RTRDMEGLFSVQSVTPAVTRSRAQGER-----RDVTNMEK---QRQRRQPPAPTRTAP*VMTIVMETAMTGR*KMLNQNPKKH--------HWRRQVRP--HLGGRPGQSQGRRSGDREIGHQT*YGRERGKTAKKIQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKP---------V*PQAERPDNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVI-TGRH*KVDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KD-----------TVLTSVEA--------CPPL*RET*RVWHL---TAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRYTKQHVVWTTMSGRLPYMQADFSLSQYCV*PRHYIRR*E*WRRCGRIC**R---LGGRCRGPKVHN----RIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLFENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVK 2291
            + +++R  ++ + +   +  EA     Y  NR P++  NGE     W+G    L++ R FG  AYV+ +   +    TR  E +F   S      R     ER     RDV    K        QP A  +  P   T   ET         N++   H        +   QV     +   PG+ +  RSG R        GR + K  +K +  P       ++A +         KS  +AL   E+ +W  AM+ E+ AL+KN T E  +    P  +K +  + ++  K   DGS+ + KARLVA+G+ Q    DF ET APVAR+S++RT+++++A +      +D  +AYLN  +EE +++++P +     +     ++L  K          +     +    LD+ L   GL+ ++ DPC YF R   G    + A++VDD++I + ++ ++++ K   ++ F MKD+G +   LG+E++++  NG + +SQ    +Y  D           TV T ++A        CP    E   + +    + VG ++ +L+     D +      L   ++  Y  QH  WT     L Y++   S          Y  R +  R  G +        GG     + +     +    A  W SRKQ+ V  SS E EY+A  EA K  ++L+ ++G I   C+      +N++A+ L++    H RTKHI +R+H IRE A  + +EL+Y+ TG  +AD+LTKGL + K
Sbjct:  781 LLDISRCMLLESKLSLNFWAEAISTACYIRNRCPSKSLNGEIPLTLWNGRKLTLNYFRTFGEKAYVLDKSPGKGKFSTRSKECIFIGYSTESKAYRLWCPAERKVLRSRDVKFTGKFGNDETLHQPTAQNQEWPANDTCEKETETLELQLTTNESNDTHQSGGTLVQNEAEQVTETRKMKVLPGRPRLVRSGRR--------GRPK-KVYRKEEVQPVTCGNVASIAEMN------DPKSVTEALSCRESKEWLEAMKREYEALVKNNTWEIVN---RPQRQKVVACQWVYNTKFNADGSIKQRKARLVAKGFLQRPNIDFHETYAPVARLSSIRTILAISANYGLIAHQLDFVSAYLNGEIEEEIYMEIPEKLDEVLKCSKVKQNLDGKVCRIRKALYGLKQSGRQWYRKLDEKLSQYGLKATSGDPCVYFERR--GRELTIAAIYVDDVIIASNKNARLNELKKALAKSFEMKDMGPIHYCLGIEIKQNA-NGDIEMSQ---RKYIMDILERFRMMDSKTVETPIDASNKLSAEMCPRTETEKAEMQNTPYRSLVGSLM-YLSVSTRPDIAFAV--SLLSQFNENYGSQH--WTAAKRVLRYLKKTAS----------YGLRFQ--RNSGALMGFSDADWGGNSDDRRSYTGYVFKFGNAAISWESRKQRTVALSSTEAEYMALSEACKEVIHLKQMIGEITGLCKSVVLQSDNQSALKLARNPVFHARTKHIDIRYHFIREAAERKDVELRYLPTGQMVADVLTKGLFKPK 1513          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: Q7G6A8_ORYSJ (Os10g0130700 protein n=3 Tax=Oryza sativa TaxID=4530 RepID=Q7G6A8_ORYSJ)

HSP 1 Score: 206 bits (523), Expect = 1.590e-51
Identity = 224/754 (29.71%), Postives = 340/754 (45.09%), Query Frame = 3
Query:  204 EAARAIVYCLNRAPTRPHNGETLYEKWHGTTPKLDHLRVFGWMAYVI----HRGQLEDDRTRDM-----EGLFSVQSVTPAVTRSRAQGERRDVTNMEKQRQRRQPPAPTRTAP*VMTI-VMETAMTGR*KMLNQNPKKHHWRRQVRPHLGGRPGQSQGRRSGDREIGHQT*Y---------GRERGKTA-KKIQALPCAWLKWKTLAALEGRYLRKSQKSALKALKSPEADK---WRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*--PQAERPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGRH*-KVDDFKHDKSRRFRMKDLGSLSRVLGMEV-RRDCPNGTMSISQGTSARY*KDTVLTS-------VEACPPL*RET*-----RVWHLTAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRY--------TKQHVVWTTMSGRLPYMQADFSLSQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAK----RWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTL-FENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLR 2306
            EA  A VY LNR+PT+  NG T +E WHG  P ++HLRVFG + YV     +  +L+D  TR +     +G  + +   P   R       RDV   E      + P    T     T+      +      L +            P  GG    S        E+     +         G   G    +++Q +  A     T   L+  Y  +   ++ + +   EA++   WR AM+EE +++  N T    +   LPVG KAI  K ++K K    G V ++KARLVA+GY Q +G DF E  APVARM T+R ++++AA   +E   MDV +A+LN  +EE ++V  PP F    ++   +R   KK +    QA R  N  L + L+ +   +S T+   Y      G + ++V V+VDDL+I+G    ++D FK +  ++FRM DLG LS  LGMEV ++D  +G        +A+  + T +         +EA   L RE+         + + VG +   +NT              DL Y   Y        T +H  W  +   L Y+     +  +      + RR +   R        + G     K    +          W S+KQ++V  SS E EY+A        ++L  LL  +     G T +  +NK+AINL K    H R+KHI  R+H IRE   ++ + ++YV+T +QLADILTK + RV+F  LR
Sbjct:  707 EAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVS---RDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQAST--------PVQGGTYPASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRYRRVQDILSA-----TEPVLDFDYSDQCLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAE---LPVGHKAIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLR--LKKALYGLKQAPRAWNAKLHNTLISLNFIKSETESAVYVRGT--GSSRLIVGVYVDDLIISGAQASEIDFFKEEMKKKFRMSDLGLLSYYLGMEVVQKD--DGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESGGEGVDSTMYRSTVGSLRYLVNTRP------------DLAYSVGYVSRFMEKPTSEH--WAAVKHILRYIAGTLDVGCW------FGRREKGELRLIGFSDSDMAGDLDDRKSTTGVLYMLGDSLISWQSQKQKVVALSSCEAEYIAATTGACQGIWLNRLLAELLGEDPGQTVMKVDNKSAINLCKNPVLHDRSKHIDTRFHFIRECVEKKQIAVEYVRTEDQLADILTKPVGRVRFLELR 1415          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 199 bits (505), Expect = 2.190e-49
Identity = 173/525 (32.95%), Postives = 254/525 (48.38%), Query Frame = 3
Query:  816 ALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*-PQAERP-DNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDD-LVITGRH*KVDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLTSVEACPPL*RET*RVWHLTAVGEVVIHLNTEAW*DHSCTARQELDLIYHTRYTKQHVVWTTMSGRLPYMQADFSLSQYCV*P--RHYIRR*E*WRRCGRIC**RLG--GRCRGPK-------------VHNRIRIQ---------AKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLF-ENKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQR 2300
            A+  P+A +W+AA  EE  A +K    E  D    P  RK I  K +FK K   DG + +YKARLVA+G++QVEG DF ET APVA+ +++RT+++LAA+ D E   MDV +A+LN  ++E +++K+P   S F R    +  L K      QA R     +      +G  R  +D   ++ +N++G   +++A++VDD L+++     V   K D   RF M DLG    +LGME+ RD P   + +SQ       K      +  C P+     +   L  + E  I        D          L+Y    T+  + +T             +LSQ+   P   H+I     +R        +L   G  +  K             V+NR  +          A  W S++Q     SS E EY+AG    K  V+LR  L  IG   +G T L  +N++AI LSK ++ H RTKHI VR+H IRE      +E +YV TGNQ+AD+LTKGL R K ++
Sbjct:  609 AMSRPDAARWKAACAEELHAFVKA---ELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVP---SGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFY-KNDDGIL-LIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVE--KCLAQHGMANCRPVSTPMAQNQKLVKLSEAEI--------DPKPYQSALGSLMYAMIGTRPDLAFTVG-----------ALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKKPLLRYVDADWAANVNNRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRAFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHEK 1104          
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 197 bits (500), Expect = 1.170e-48
Identity = 166/529 (31.38%), Postives = 267/529 (50.47%), Query Frame = 3
Query:  816 ALKSPEADKWRAAMEEEWRALMKNGT*ESEDPGRLPVGRKAIRTKRIFKRKLKEDGSVARYKARLVAQGYSQVEGEDFFETSAPVARMSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPV*--PQAERPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTD--ILVAVHVDDLVITGRH*KV-DDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGTSARY*KDTVLT--SVEACPPL*R--ET*RVWHLTAVGEVVIHLN---------TEAW*DHSCTARQELD-----LIYH-TRYTKQHVVWTTMSGRLPYMQA--DFSL----SQYCV*PRHYIRR*E*WRRCGRIC**RLGGRCRGPKVHNRIRIQAKRWCSRKQQLVTWSSIEVEYVAGGEARKVTVYLRDLLGSIGFGCRGSTTLFE-NKTAINLSKGSSAHCRTKHIGVRWHGIREWAREEILELKYVQTGNQLADILTKGLSRVKFQRLR 2306
            AL SP A+ W+ A++ E+ +L++N T +  +   +P  +  + +K +FK K   DG + R KARLVAQGYSQ  G D+ +  APVA+ +++R+V+++  E D E   MDV  A+LN  +EE +F+K P  F   +RD P +    +K +    Q+ R  N  +D+FL   G  R+  DPC Y  +  +GD    ++VAV+VDDL+I   + ++  + K     RF M+D   +  +LGM+V+RD  N  ++I Q         +VL   ++  C P+    E    +   A  E ++ L          T A    S   R ++      L  H ++  KQH  W  +   L Y++   D+ L    S+      H     + W   G I       R        ++      W S++Q +V  S  E EYVA  +A +  ++LR L   + F     T +FE N+ AI L+K    H RTKHI +++H +R+   +++++L+Y  T   +AD+LTKGL R +F++LR
Sbjct:  782 ALSSPNAELWKDAIQNEYDSLIENETWKLVE---MPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFL----SSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLKDYQSAIGCLTYA----SIGTRPDISAAVGVLSQHMSKPGKQH--WIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADAD-W--AGDI-----DTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEKLR 1287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4465.11262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q7XTU6_ORYSJ1.070e-5430.22OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subs... [more]
A0A151TIQ1_CAJCA4.510e-5427.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9JFU5_PARCT2.880e-5331.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GQU1_9APHY2.130e-5230.85Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A4Y9ZVS1_9AGAM4.930e-5232.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9DPP1_PARCT1.070e-5127.35Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0V0T740_9BILA1.260e-5127.39Retrovirus-related Pol polyprotein from transposon... [more]
Q7G6A8_ORYSJ1.590e-5129.71Os10g0130700 protein n=3 Tax=Oryza sativa TaxID=45... [more]
A0A401H123_9APHY2.190e-4932.95Retrovirus-related Pol polyprotein from transposon... [more]
A0A7M6DPI8_9CNID1.170e-4831.38Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4465contigH-paniculata_contig4465:2115..4662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score62.4
Seed ortholog evalue1.7e-07
Seed eggNOG ortholog4558.Sb03g040848.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,COG2801@1,KOG0017@2759
COG Functional cat.O
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons3
Model size2315
Cds size369
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4465.11262.1prot_H-paniculata_contig4465.11262.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4465 3981..4510 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930343.0736763-UTR-H-paniculata_contig4465:2114..27761622930343.0736763-UTR-H-paniculata_contig4465:2114..2776Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4465 2115..2776 -
1691481249.8869524-UTR-H-paniculata_contig4465:2114..27761691481249.8869524-UTR-H-paniculata_contig4465:2114..2776Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4465 2115..2776 -
1622930343.0937448-UTR-H-paniculata_contig4465:2848..39801622930343.0937448-UTR-H-paniculata_contig4465:2848..3980Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4465 2849..3980 -
1691481249.900493-UTR-H-paniculata_contig4465:2848..39801691481249.900493-UTR-H-paniculata_contig4465:2848..3980Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4465 2849..3980 -
1622930343.1482635-UTR-H-paniculata_contig4465:4510..46621622930343.1482635-UTR-H-paniculata_contig4465:4510..4662Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4465 4511..4662 -
1691481249.9344785-UTR-H-paniculata_contig4465:4510..46621691481249.9344785-UTR-H-paniculata_contig4465:4510..4662Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4465 4511..4662 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930343.1132834-CDS-H-paniculata_contig4465:3980..41581622930343.1132834-CDS-H-paniculata_contig4465:3980..4158Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4465 3981..4158 -
1691481249.9107397-CDS-H-paniculata_contig4465:3980..41581691481249.9107397-CDS-H-paniculata_contig4465:3980..4158Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4465 3981..4158 -
1622930343.130702-CDS-H-paniculata_contig4465:4319..45101622930343.130702-CDS-H-paniculata_contig4465:4319..4510Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4465 4320..4510 -
1691481249.9240768-CDS-H-paniculata_contig4465:4319..45101691481249.9240768-CDS-H-paniculata_contig4465:4319..4510Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4465 4320..4510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4465.11262.1

>prot_H-paniculata_contig4465.11262.1 ID=prot_H-paniculata_contig4465.11262.1|Name=mRNA_H-paniculata_contig4465.11262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
MTRRKIITTNMGRRYGVEAARAIVYCLNRAPTRPHNGETLYEKWHGTTPK
LDHLRVFGWMAYVIHRGQLEDDRTRDMEGLFSVQSVTPAVTRSRAQGERR
DVTNMEKQRQRRQPPAPTRTAP*
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mRNA from alignment at H-paniculata_contig4465:2115..4662-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4465.11262.1 ID=mRNA_H-paniculata_contig4465.11262.1|Name=mRNA_H-paniculata_contig4465.11262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2548bp|location=Sequence derived from alignment at H-paniculata_contig4465:2115..4662- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATAGAATGTCTTCGGTCTGATCGAGGAGGAGAGTTTACAGGAGAAGCATT CCGACAGTTTTGTGCGGAAAATGGCATAAAGCAAGAATTTTCTGCCGCCT ACACGCCGCAGCAAAATGGTGTGGTGGAGCGCAGGTGGCGTGCGTTTTCG AAATGACCCGACGTAAGATTATCACAACCAACATGGGCCGCAGGTATGGG GTGGAAGCAGCGCGCGCGATTGTGTACTGCTTAAATCGCGCCCCGACGCG ACCGCACAACGGAGAGACGCTGTATGAGAAATGGCACGGCACGACACCAA AGCTTGACCACCTTCGTGTCTTCGGCTGGATGGCGTACGTGATGTTCCAG TCCCGGCAGAGACGAAAACTCGATGACAAAGCATGACTGGGGGTGTTTCT GGAGTACGACGAAGATGGCCCGAGTTATCGCATATATAACCCGGAAAACA AGACCGTCTAGTTAAGCAGGAATGTAAGTTTGATGACGAGGATTTCGTAA CCAGTCATCGCGGACAGTTAGAGGACGACAGGACGCGAGACATGGAAGGC CTCTTTTCAGTACAGTCGGTCACACCAGCAGTAACGCGATCTCGCGCCCA AGGTGAGCGAAGAGACGTAACCAACATGGAAAAACAACGTCAGCGTCGTC AGCCGCCAGCTCCAACACGTACAGCGCCTTGAGTGATGACAATAGTCATG GAGACAGCGATGACTGGCAGGTGAAAAATGCTGAATCAGAACCCGAAGAA GCATCATTGGCGGAGACAGGTGCGCCCACATCTCGGGGGGAGACCAGGAC AGAGTCAGGGACGGAGGAGCGGCGACCGCGAGATCGGTCACCAAACCTGA TACGGGCGAGAGCGAGGGAAAACCGCGAAGAAGATTCAGGCGCTGCCGTG CGCGTGGCTAAAGTGGAAGACACTAGCAGCCCTGGAGGGGCGGTATCTGA GGAAGAGCCAAAAATCTGCGCTAAAAGCATTAAAGAGCCCAGAGGCAGAC AAATGGCGCGCAGCAATGGAGGAGGAATGGAGGGCATTGATGAAAAATGG AACATGAGAAAGCGAAGACCCGGGGAGGTTACCGGTAGGGCGGAAGGCGA TTCGTACGAAAAGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTG GCACGGTACAAAGCGCGACTGGTAGCTCAAGGCTATTCACAGGTGGAGGG TGAAGATTTCTTTGAAACCAGCGCCCCCGTAGCTCGCATGTCAACGTTAC GTACCGTTGTTAGCCTGGCCGCCGAACACGATTTCGAACCAGAAGACATG GACGTATATGCGGCCTATTTGAACGCTCCGGTAGAAGAACGGCTGTTTGT TAAGCTACCCCCCGAGTTTTCCCCTTTCTCCCGAGACATACCGTTTGTGC GCCACCTTTGTAAAAAGCCTGTTTGACCTCAAGCAGAGCGCCCGGATAAT ACTCTTGACGATTTTCTTGTTGGGATAGGACTCCAGCGTTCCACTACCGA CCCATGCTTTTATTTCTCTCGCAACGAAGAGGGGGATACAGACATTCTCG TGGCCGTCCATGTTGACGACCTGGTCATCACTGGACGTCATTAGAAAGTA GACGACTTCAAACACGACAAAAGTCGGCGTTTCAGGATGAAAGACTTGGG CTCCCTCTCGCGCGTGTTGGGAATGGAGGTACGACGTGACTGCCCCAATG GTACCATGTCAATATCTCAAGGTACATCCGCGAGGTACTGAAAAGATACT GTTTTAACAAGTGTCGAGGCGTGCCCACCCCTGTAAAGGGAAACGTGAAG AGTTTGGCACCTGAGTCCGCCGACTAGCTCCCCGAACCGAAACCACTGGG GCTGCTGTCCGGGATAGGCGCAGGAGTACAAGAAAGCAGCTGTGGGAGAA GTGGTAATTCATCTGAATACAGAGGCATGGTAGGATCACTCATGTACAGC TCGACAAGAACTAGACCTGATATATCATACGCGGTACACCAAGCAGCACG TCGTATGGACGACCATGTCAGGAAGACTTCCGTACATGCAAGCGGATTTT TCGTTATCTCAGTACTGTGTCTGACCTCGGCATTACATTCGGCGTTAAGA ATAATGGCGACGGTGTGGAAGGATTTGTTGATGACGATTGGGCGGAAGAT GTCGAGGACCGAAAGTCCACAACAGGATACGTATTCAAGCTAAACGGTGG TGCTCTAGGAAGCAACAGTTAGTCACGTGGTCCAGTATAGAGGTAGAGTA CGTTGCTGGAGGAGAAGCGAGAAAGGTGACGGTATATCTTAGGGATTTAC TAGGATCAATAGGTTTCGGATGCAGGGGGAGCACGACATTATTTGAGAAC AAGACAGCTATCAATCTCAGTAAGGGATCTAGCGCACACTGCAGGACAAA GCACATCGGAGTGCGCTGGCACGGAATTCGAGAGTGGGCTCGAGAAGAAA TATTGGAGTTGAAATACGTGCAGACCGGCAACCAACTTGCTGACATTTTA ACGAAAGGACTCAGCAGAGTAAAGTTTCAGAGACTGAGAAACTTTCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig4465:2115..4662-

>mRNA_H-paniculata_contig4465.11262.1 ID=mRNA_H-paniculata_contig4465.11262.1|Name=mRNA_H-paniculata_contig4465.11262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig4465:2115..4662- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCCGACGTAAGATTATCACAACCAACATGGGCCGCAGGTATGGGGT
GGAAGCAGCGCGCGCGATTGTGTACTGCTTAAATCGCGCCCCGACGCGAC
CGCACAACGGAGAGACGCTGTATGAGAAATGGCACGGCACGACACCAAAG
CTTGACCACCTTCGTGTCTTCGGCTGGATGGCGTACGTGATATGACCCGA
CGTAAGATTATCACAACCAACATGGGCCGCAGGTATGGGGTGGAAGCAGC
GCGCGCGATTGTGTACTGCTTAAATCGCGCCCCGACGCGACCGCACAACG
GAGAGACGCTGTATGAGAAATGGCACGGCACGACACCAAAGCTTGACCAC
CTTCGTGTCTTCGGCTGGATGGCGTACGTGATTCATCGCGGACAGTTAGA
GGACGACAGGACGCGAGACATGGAAGGCCTCTTTTCAGTACAGTCGGTCA
CACCAGCAGTAACGCGATCTCGCGCCCAAGGTGAGCGAAGAGACGTAACC
AACATGGAAAAACAACGTCAGCGTCGTCAGCCGCCAGCTCCAACACGTAC
AGCGCCTTGATCATCGCGGACAGTTAGAGGACGACAGGACGCGAGACATG
GAAGGCCTCTTTTCAGTACAGTCGGTCACACCAGCAGTAACGCGATCTCG
CGCCCAAGGTGAGCGAAGAGACGTAACCAACATGGAAAAACAACGTCAGC
GTCGTCAGCCGCCAGCTCCAACACGTACAGCGCCTTGA
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