prot_H-paniculata_contig4465.11261.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4465.11261.1
Unique Nameprot_H-paniculata_contig4465.11261.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length158
Homology
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 99.4 bits (246), Expect = 3.230e-21
Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 0
Query:    1 MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPRPD------------NTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLDD----FKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ 151
            + ++RT++SLAA HD+E   MDV +AYLN  +EE ++++LPP F+P     P   HL  + +               TL   +  +G  R   D   ++ R  EG++ I+VA  VDDL ITG  D    F  D  +RF M DLG L  +LG+EVRRD    T++ISQ
Sbjct: 1120 LPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAP-----PEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKR--EGESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQ 1279          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY)

HSP 1 Score: 99.4 bits (246), Expect = 3.300e-21
Identity = 63/167 (37.72%), Postives = 92/167 (55.09%), Query Frame = 0
Query:    1 MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPRPD------------NTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLDD----FKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ 151
            + ++RT+++LAA HD+E   MDV +AYLN  +EE +++  PP FS     +P   HL  + +               TL   ++ +G  R   D   ++ R  EG++ I+VA  VDDL I G  D    F  D  +RF M DLG+L  +LG+EVRRDC   T++ISQ
Sbjct: 1903 LPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSFS-----MPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKR--EGESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQ 2062          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 92.8 bits (229), Expect = 6.190e-19
Identity = 58/173 (33.53%), Postives = 96/173 (55.49%), Query Frame = 0
Query:    1 MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRD--IPFVRHLCKKPRPDNT-----LDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLDD----FKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ-----GTSARY 157
            ++++R +++LAA HD++   MDV  AYLNA +EE +F+K PP  +   ++  +  +RH     +         +   L  +GL RS  D C ++   ++    +++A+ VDD  I G ++    FK + S+RF M DLG +  +LG+EVRRD    T+S+SQ     G  AR+
Sbjct: 1050 LASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARF 1222          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: Q9SZY0_ARATH (Putative retrotransposon n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SZY0_ARATH)

HSP 1 Score: 85.9 bits (211), Expect = 1.590e-16
Identity = 51/161 (31.68%), Postives = 94/161 (58.39%), Query Frame = 0
Query:    3 TLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEF-SPFSRDIPFVRH-----LCKKPRPDNT-LDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLD-----DFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ 151
            ++R ++++ AE ++E E +DV  A+L+  +EE++F++ P  + S F +    + +     L + PR  N   D +++ IG +RS  + C Y    E+G + + + ++VDD+++   D     + K   S +F MKDLG+  R+LGME+ RD   GT+++SQ
Sbjct:  830 SIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEAPEGYESQFKQGEVCLLNKTMYGLKQSPRRWNQKFDSYMLEIGFERSPRNKCAYIKSLEDG-SKVYLLIYVDDMLVAARDMQVISELKQKLSEKFEMKDLGAAKRILGMEISRDRVKGTLTLSQ 989          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A8J6L6Q6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L6Q6_TENMO)

HSP 1 Score: 85.5 bits (210), Expect = 2.170e-16
Identity = 56/167 (33.53%), Postives = 88/167 (52.69%), Query Frame = 0
Query:    1 MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPRP-----------DNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLDDF-----KHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ 151
            M TLR ++S+AA++D +   +DV  A+L+  ++E L+++ P  F    ++      +CK  +            ++ L+  L  IG  RS TDPC Y  R   G    L+AV+VDD++I   DDF     K+  + +F MKDLG +S+ LG+   RD    T+ I Q
Sbjct:  839 METLRFLISMAAKYDLKIHQLDVKNAFLHGDLKEELYIQQPTGFEQTGKE----NQICKLRKAMYGLKQGSRAWNSKLNSVLTKIGFTRSQTDPCVYTKR--AGRKMELLAVYVDDILIFSNDDFATSSTKNSLNEKFHMKDLGQVSKCLGINFTRDWKRHTIHIDQ 999          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 85.5 bits (210), Expect = 2.200e-16
Identity = 59/169 (34.91%), Postives = 94/169 (55.62%), Query Frame = 0
Query:    1 MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHL--CKKPRPDN----------TLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITG----LDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQGT 153
            +S++RT+++LAA +D+E E M+V +AYLN  ++E ++++ PP  +P       + HL  C K               TL + +  +G  R  +D   ++ R   GD+ ++VA  VD L I G    + DFK   S RF M DLG++  +LG+EV+RD    T++ISQ T
Sbjct: 1054 LSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAG-----LEHLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKR--AGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRT 1215          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A8J5YZC3_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YZC3_9ROSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.680e-16
Identity = 52/150 (34.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:    1 MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFS-PFSRDIPF-----VRHLCKKPRP-DNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLD-----DFKHDKSRRFRMKDLGSLSRVLGMEV 138
            + T+R +V+LAA+ +++   +DV +A+LN  +EE ++V+ P  F  P   D+ +     +  L + PR   + +D +L+G+G +RS ++P  Y  + E G+T ++V+V+VDDL++T  D     DFK    + F M D G ++  LGMEV
Sbjct:  173 LDTIRLLVALAAQLEWKIHQLDVKSAFLNGFLEEEIYVEQPEGFKVPHKEDVVYRLKKALYGLKQAPRAWYSRIDSYLIGLGFERSLSEPTLYIKK-ENGETQLIVSVYVDDLLVTRGDQAILADFKTKMHQMFEMFDFGRMTYFLGMEV 321          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A8J6HJQ3_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HJQ3_TENMO)

HSP 1 Score: 85.1 bits (209), Expect = 2.870e-16
Identity = 56/167 (33.53%), Postives = 88/167 (52.69%), Query Frame = 0
Query:    1 MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVRHLCKKPRP-----------DNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLDDF-----KHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ 151
            M TLR ++S+AA++D +   +DV  A+L+  ++E L+++ P  F    ++      +CK  +            ++ L+  L  IG  RS TDPC Y  R   G    L+AV+VDD++I   DDF     K+  + +F MKDLG +S+ LG+   RD    T+ I Q
Sbjct:  505 METLRFLISMAAKYDLKIHQLDVKNAFLHGDLKEELYIQQPTGFEQPGKE----NQICKLRKAMYGLKQDSRAWNSKLNSVLTKIGFTRSQTDPCIYTKR--AGRKIELLAVYVDDILIFSNDDFATSSTKNSLNEKFHMKDLGQVSKCLGINFTRDWKRHTIHIDQ 665          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.580e-16
Identity = 59/165 (35.76%), Postives = 96/165 (58.18%), Query Frame = 0
Query:    2 STLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLP--------PEFS-PFSRDIPFVRHLCKKPRPDN-TLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLDD-----FKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ 151
            +++R ++SLAA+H+ E + MDV  A+LN+ ++E +++++P        P  S P  +    +  L + PR  N T+D F++ IG  +S  D C Y  R +E    ILV+++VDDL++    D      K   S+RF+M DLG LS  LG+E+ R  P+G++ I Q
Sbjct:  136 TSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKPVLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQDEDI--ILVSLYVDDLILASNSDEMMQTTKIALSKRFKMTDLGPLSYCLGIEIVRS-PSGSVFIHQ 297          
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Match: A0A0K9RFP1_SPIOL (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RFP1_SPIOL)

HSP 1 Score: 80.5 bits (197), Expect = 9.810e-16
Identity = 55/163 (33.74%), Postives = 86/163 (52.76%), Query Frame = 0
Query:    1 MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRDIPFVR------HLCKKPRP-DNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVAVHVDDLVITGLD-----DFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSISQ 151
            M+++RTV+ LAA  D + E +DV  A+L+  + E +++  P  F    +D    +       L + PR      D F+   G + +T DPC YF R   G   I++ ++VDD++I G D     + K   S+ F MKDLG   ++LGME+ RD   G + +SQ
Sbjct:    1 MTSIRTVLGLAASLDLKLEQLDVKTAFLHGDLHEEIYMDQPGGFDEKGKDKLVFKLKKSLYGLKQAPRQWYRKFDSFMTSNGYKCTTADPCVYF-RKFPGGNFIILLLYVDDMLIVGQDANVIQNLKKAFSKLFDMKDLGPSKKILGMEIARDRKVGKLWLSQ 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4465.11261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G8RWY5_9APHY3.230e-2138.92Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A2G8RW53_9APHY3.300e-2137.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GQU1_9APHY6.190e-1933.53Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
Q9SZY0_ARATH1.590e-1631.68Putative retrotransposon n=1 Tax=Arabidopsis thali... [more]
A0A8J6L6Q6_TENMO2.170e-1633.53Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A060S825_PYCCI2.200e-1634.91CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A8J5YZC3_9ROSI2.680e-1634.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J6HJQ3_TENMO2.870e-1633.53Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0WHK2_9STRA3.580e-1635.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0K9RFP1_SPIOL9.810e-1633.74Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..150
e-value: 3.0E-18
score: 66.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4465contigH-paniculata_contig4465:2922..3425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4465.11261.1mRNA_H-paniculata_contig4465.11261.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4465 2115..3671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4465.11261.1 ID=prot_H-paniculata_contig4465.11261.1|Name=mRNA_H-paniculata_contig4465.11261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
MSTLRTVVSLAAEHDFEPEDMDVYAAYLNAPVEERLFVKLPPEFSPFSRD
IPFVRHLCKKPRPDNTLDDFLVGIGLQRSTTDPCFYFSRNEEGDTDILVA
VHVDDLVITGLDDFKHDKSRRFRMKDLGSLSRVLGMEVRRDCPNGTMSIS
QGTSARY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2