prot_H-paniculata_contig4464.11258.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4464.11258.1
Unique Nameprot_H-paniculata_contig4464.11258.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length326
Homology
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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: D7G5N8_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N8_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 2.240e-62
Identity = 148/305 (48.52%), Postives = 178/305 (58.36%), Query Frame = 0 
Query:   27 LSCCSVLLACGLCGAFLPPPAALGPTLNRNHRVVVSLSDLLQRGVRSRTAGTSTNNIACRMQQ-EGGNNELQLAVKTLAAQVQDLTTMVKQLADDTTTATGGASQIINGAAVENNAAVPVAPSTAPAGKGMKAGPTELVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAPVTAAAAAPVEVXXXXXXXXXXXPAEETPE-----GAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDELP 325
            L+    L  CGLCGAF+PP                                      A RMQQ  G + ELQ+AV  LA QV++LT MV QLA +      GA++ ING  V+  +A+PV  + A      K G T LVS SAAQQRID WL E G   A+       PVA               XXXXXXXXXXX            G+GYK+KIEW+GAIHEV CDAETT+L+AAM+AG+ELP SCMSGSCLTCP K+ SG VDQSEGVLE+EQ DAG++LTC+SYP SDV FAV++E++LP
Sbjct:   11 LTLACALAWCGLCGAFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------AVRMQQGSGSDQELQVAVSKLAGQVEELTAMVAQLAAEPG-GNAGAAKAINGGVVDGGSALPVVSTKA------KGGSTPLVSTSAAQQRIDQWLRESGGEAASA------PVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLP 296
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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A835YL41_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL41_9STRA)

HSP 1 Score: 162 bits (409), Expect = 7.760e-45
Identity = 111/232 (47.84%), Postives = 136/232 (58.62%), Query Frame = 0 
Query:   95 ELQLAVKTLAAQVQDLTTMVKQLA-DDTTTATGGASQIINGAAVENNAAVPVAPSTAPAGKGMKAGPTE-LVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAPVTAAAAAPVEVXXXXXXXXXXXPAEETPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            EL  AV+ L AQV  LT +VK++A  +   A    +  INGAAV   A  P   +   AG    A P E LV +SAA+ RI ++L  QG                       AA P   XXXX          E P G GY + I+WDGA H V CD ETTVL+AAM+AG++LPHSCMSGSCLTCP +L +G+V+Q +GVLE++Q  AG MLTCVSYPLSD+ F VI EDEL
Sbjct:   11 ELVKAVEALQAQVTQLTALVKEMAASEANGAAAAPAAKINGAAVPLKA--PTLQTGLIAGTVASAPPGEILVPVSAAEARIQSFLASQGKAAPXXXXXXXXXXXXXXXXXXXAAVPAAXXXXXP---------EAPPGDGYVVTIDWDGATHVVRCDGETTVLEAAMDAGLDLPHSCMSGSCLTCPGRLSAGRVEQGDGVLEDDQIAAGLMLTCVSYPLSDLRFEVIGEDEL 231
[Close]
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A5N6MZ86_9ASTR (Ferredoxin n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MZ86_9ASTR)

HSP 1 Score: 107 bits (268), Expect = 5.420e-25
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 0 
Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ IE DG   E+  D + T+L+ A+EAG+ +PH C  G C+TCPAKL SG VDQSEG+L E+  + GY L CVSYP SD +  +I E+EL
Sbjct:   50 YKVAIEHDGQTTELEVDPDETILEKALEAGLAVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSEDVIERGYSLLCVSYPKSDCQVKIIPEEEL 141
[Close]
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A830CLQ9_9LAMI (Ferredoxin n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CLQ9_9LAMI)

HSP 1 Score: 106 bits (265), Expect = 1.570e-24
Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 0 
Query:  227 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            TP    YK+ IE DG   E+  + + T+L  A++AG+++PH C  G C+TCPA+L +GKVDQSEG+L ++  + GY LTC SYP SD    +I E+EL
Sbjct:   46 TPSVHAYKVVIEHDGVATELEVEPDETILSKALDAGLDVPHDCKLGVCMTCPAQLVAGKVDQSEGMLSDDVVERGYALTCASYPRSDCRIKIIPEEEL 143
[Close]
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI001CB96E6F (ferredoxin C 1, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB96E6F)

HSP 1 Score: 106 bits (264), Expect = 2.320e-24
Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:  227 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            T +   YKI IE DG   EV  D + T+L+ A+E G+ +PH C  G C+TCPAKL SG VDQSEG+L ++  + GY L CVSYP SD    +I E+EL
Sbjct:   48 TTQKCNYKISIEHDGETTEVEVDPDETILEKALETGMSVPHDCKLGVCMTCPAKLISGNVDQSEGMLSDDVIERGYSLLCVSYPKSDCVVKIIPEEEL 145
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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A7J7LHT5_9MAGN (Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LHT5_9MAGN)

HSP 1 Score: 103 bits (258), Expect = 1.140e-23
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0 
Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ IE +G+I E+  D + T+L+ A++ G+ +PH C  G C+TCPAKL SG VDQSEG+L ++  D GY L CV+YP SD     I E+EL
Sbjct:   39 YKVVIEHEGSIKELEVDEDETILNKALDIGLSVPHDCKLGVCMTCPAKLMSGSVDQSEGMLSDDVVDNGYALLCVAYPRSDCHIRTIPEEEL 130
[Close]
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI001CB9638D (ferredoxin C 1, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9638D)

HSP 1 Score: 104 bits (259), Expect = 1.170e-23
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:  227 TPEGAGYKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            T +   YKI IE DG   E+  D + T+L+ A+E G+ +PH C  G C+TCPAK+ SG VDQSEG+L ++  + GY L CVSYP SD    +I E+EL
Sbjct:   46 TTQKCHYKISIEHDGQATEIEVDPDETILEKALETGMSVPHDCKLGVCMTCPAKMISGNVDQSEGMLSDDVIERGYSLLCVSYPKSDCVVKIIPEEEL 143
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BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: A0A6P5SE90_PRUAV (Ferredoxin n=7 Tax=Prunus TaxID=3754 RepID=A0A6P5SE90_PRUAV)

HSP 1 Score: 103 bits (258), Expect = 1.390e-23
Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0 
Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ +E +G   E+  +A+ T+L+ A+E+G+ +PH C  G C+TCPA+L SGKVDQ+EG+L ++  + GY L CVSYP SD     I EDEL
Sbjct:   46 YKVVVEHEGLSTELEVEADETILEKALESGLSVPHDCKLGVCMTCPARLLSGKVDQNEGMLSDDVVEGGYTLLCVSYPQSDCHIKTIPEDEL 137
[Close]
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI0010A2FF49 (ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FF49)

HSP 1 Score: 103 bits (258), Expect = 1.390e-23
Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 0 
Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ IE  G + E+  D E T+L  A+++G+E+PH C  G C+TCPA+L SG VDQSEG+L ++  + GY L C SYP SD     I EDEL
Sbjct:   46 YKVVIEHQGELRELEIDPEETILSKALDSGLEVPHDCKLGVCMTCPARLLSGSVDQSEGMLSDDVVERGYALLCASYPRSDCHIRTIPEDEL 137
[Close]
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Match: UPI00053C344A (uncharacterized protein LOC104822270 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C344A)

HSP 1 Score: 103 bits (257), Expect = 2.170e-23
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0 
Query:  233 YKIKIEWDGAIHEVTCDAETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDAGYMLTCVSYPLSDVEFAVIEEDEL 324
            YK+ +E +GA  E+  +AE T+L  A+++G+++PH C  G C+TCPAKL +G VDQSEG+L E+    GY L CVSYP SD     I EDEL
Sbjct:   50 YKVVVEPNGATTELEVEAEETILSKALDSGLDVPHDCKLGVCMTCPAKLVNGTVDQSEGMLSEDVVARGYTLLCVSYPTSDCRIKTIPEDEL 141
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4464.11258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5N8_ECTSI2.240e-6248.52Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
A0A835YL41_9STRA7.760e-4547.84Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A5N6MZ86_9ASTR5.420e-2553.26Ferredoxin n=2 Tax=Mikania micrantha TaxID=192012 ... [more]
A0A830CLQ9_9LAMI1.570e-2447.96Ferredoxin n=1 Tax=Phtheirospermum japonicum TaxID... [more]
UPI001CB96E6F2.320e-2451.02ferredoxin C 1, chloroplastic-like n=1 Tax=Erigero... [more]
A0A7J7LHT5_9MAGN1.140e-2350.00Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 ... [more]
UPI001CB9638D1.170e-2348.98ferredoxin C 1, chloroplastic-like n=1 Tax=Erigero... [more]
A0A6P5SE90_PRUAV1.390e-2348.91Ferredoxin n=7 Tax=Prunus TaxID=3754 RepID=A0A6P5S... [more]
UPI0010A2FF491.390e-2350.00ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alb... [more]
UPI00053C344A2.170e-2351.09uncharacterized protein LOC104822270 n=1 Tax=Taren... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..120
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 224..324
NoneNo IPR availablePANTHERPTHR43112:SF9FERREDOXIN C 1, CHLOROPLASTICcoord: 224..324
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..325
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 37..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 26..36
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 238..310
e-value: 1.8E-14
score: 53.4
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 233..322
score: 11.719
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 220..324
e-value: 9.5E-26
score: 91.8
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMTIGR02008TIGR02008coord: 233..324
e-value: 1.5E-26
score: 90.0
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 219..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4464contigH-paniculata_contig4464:3664..11497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4464.11258.1mRNA_H-paniculata_contig4464.11258.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4464 3533..12697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4464.11258.1 ID=prot_H-paniculata_contig4464.11258.1|Name=mRNA_H-paniculata_contig4464.11258.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MAKTCAKSSTTSVRMNATATLTRRRWLSCCSVLLACGLCGAFLPPPAALG
PTLNRNHRVVVSLSDLLQRGVRSRTAGTSTNNIACRMQQEGGNNELQLAV
KTLAAQVQDLTTMVKQLADDTTTATGGASQIINGAAVENNAAVPVAPSTA
PAGKGMKAGPTELVSISAAQQRIDAWLNEQGFHVATVDAPQQPPVAVVAP
VTAAAAAPVEVAPVEVAPMATPPAEETPEGAGYKIKIEWDGAIHEVTCDA
ETTVLDAAMEAGIELPHSCMSGSCLTCPAKLKSGKVDQSEGVLEEEQTDA
GYMLTCVSYPLSDVEFAVIEEDELP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR010241Fd_pln
IPR0360102Fe-2S_ferredoxin-like_sf