prot_H-paniculata_contig4463.11256.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4463.11256.1
Unique Nameprot_H-paniculata_contig4463.11256.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length252
Homology
BLAST of mRNA_H-paniculata_contig4463.11256.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 5.940e-25
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0
Query:   30 VTLRKACCLCVRLKRACDGKNPCHLCIRRRERCTRSVKRKSGPAKGTKYTTRRQRLEAGIIDP 92
            V LRK+C LCVRLKRACDGKNPCHLC+RRRE CTRSVKRKSGPAKGTKYTTRR R+EAGI +P
Sbjct:   60 VLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSRMEAGIAEP 122          
BLAST of mRNA_H-paniculata_contig4463.11256.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.350e-22
Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = 0
Query:   30 VTLRKACCLCVRLKRACDGKNPCHLCIRRRERCTRSVKRKSGPAKGTKYTTRRQRLEAGIIDP 92
            V LRK+C LCVRLKRACDG++PC LC+RRRE CTRSVKRKSGPAKGTKYTTRR R+EAGI +P
Sbjct:   32 VLLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVRMEAGIAEP 94          
BLAST of mRNA_H-paniculata_contig4463.11256.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.210e-14
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0
Query:   30 VTLRKACCLCVRLKRACDGKNPCHLCIRRRERCTRSVKRKSGPAKGTKYTTRRQR 84
            V LRK+C  CVRLKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY  RR+R
Sbjct:    8 VELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 62          
BLAST of mRNA_H-paniculata_contig4463.11256.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.640e-14
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0
Query:   30 VTLRKACCLCVRLKRACDGKNPCHLCIRRRERCTRSVKRKSGPAKGTKYTTRRQR 84
            + LRK+C  CVRLKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY  RR+R
Sbjct:   16 IELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 70          
BLAST of mRNA_H-paniculata_contig4463.11256.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 9.020e-10
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   32 LRKACCLCVRLKRACDGKNPCHLCIRRRERCTRSVKRKSGPAKGTKYTTRRQR 84
            LRK+C  CVR+KR C G  PC LC RR + C RS+K++SGPAKGTKY  R+ R
Sbjct:   23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPR 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4463.11256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPZ9_ECTSI5.940e-2585.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F3_9PHAE1.350e-2280.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L009_9PHAE1.210e-1472.73Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI1.640e-1470.91Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LKM5_ECTSI9.020e-1060.38Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4463contigH-paniculata_contig4463:3696..15232 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4463.11256.1mRNA_H-paniculata_contig4463.11256.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4463 3696..15541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4463.11256.1 ID=prot_H-paniculata_contig4463.11256.1|Name=mRNA_H-paniculata_contig4463.11256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
MNQSAAQGSSAANKKVSSAAAMEESKEVPVTLRKACCLCVRLKRACDGKN
PCHLCIRRRERCTRSVKRKSGPAKGTKYTTRRQRLEAGIIDPVVPPKGRA
NKRISKSGAAAAAAKATVIGTPTTTPASTAVATSNSGSARKGAGARAAVN
ALAGTSASSSPISPAAAAMSTSSSSGSLASSAAASISSKSKKEFPPVAST
TSSSSSSSGGSGTGGGGSKASRGRDTTAAMTLTGGGGGGGGTRGSGRGSG
RG
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