prot_H-paniculata_contig44526.11242.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44526.11242.1
Unique Nameprot_H-paniculata_contig44526.11242.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 2.980e-49
Identity = 91/187 (48.66%), Postives = 119/187 (63.64%), Query Frame = 0
Query:    1 MFANPQARFSSVAMAVPKKDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            +F N QA ++S AMA PKK  YR+V+D+R  N  +      MPN E     ++ A  + +LDLLQ YWQ PL P+AQEI T+ T  G+YTP RVPQG+LNATSYFQ T+  +L GL    C VWVDD+  W     +L+  L ++L+RL+  G+Y AAHK   F   + WCGK+YS   V HDPER+
Sbjct:  789 VFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERL 972          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 4.820e-48
Identity = 88/191 (46.07%), Postives = 123/191 (64.40%), Query Frame = 0
Query:    1 MFANPQARFSSVAMAVPKKD----TYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            ++ N QA ++S  M  PK+     TYR V D+R VN  I  S  PMP+LE   + ++ A+ + +LD+LQGYW MPL P+AQEI TM+   G+Y+P RVPQGVLNATSY+QGTM  +L  L    C VWVDDI  W  T ++L+  L ++L R +  G++ AAHK   +   ++WCGK+YS   + HD +R+
Sbjct:  687 VYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRL 874          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 5.500e-40
Identity = 87/188 (46.28%), Postives = 113/188 (60.11%), Query Frame = 0
Query:    6 QARFSSVAMAVPK------KDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            QA ++S AM VPK      +  YR+  DY   N       + +P+ E     + GA+ F  LDLLQGYWQMPL   A+EI ++ T +G++ PTRVPQ VLNAT YFQ  M ++L GL    C VWVDD   W     +L+  L  +L RLQ  GI+AAAHK   F  ++RWCGK+YSG  V+ DPER+
Sbjct:  441 QAVWASPAMTVPKPGRVGREGEYRLGNDYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERL 625          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A6A3GQ28_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GQ28_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.570e-37
Identity = 73/189 (38.62%), Postives = 111/189 (58.73%), Query Frame = 0
Query:    1 MFANPQARFSSVAMAV--PKKDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            ++ N  +R+   A+ +  P  D++R   DYR +NN+    A  MP+LE       G   +   D L+G+WQ+PLD  +QE ++ +T KG++TPTRVPQG  +A  +FQ T+  VL  L+     VW+DD+ ++A T +EL+  +   L +L   G+     K+ LF  E+RWCG+I S A V HDPER+
Sbjct:  302 VYENRASRWCCPALPIRKPGTDSFRQTNDYRPLNNVTEPIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGSTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERI 490          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A2P4YDS0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDS0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.680e-37
Identity = 73/187 (39.04%), Postives = 116/187 (62.03%), Query Frame = 0
Query:    4 NPQARFSSVAMAVPK---KDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            N ++R++  A+ V K    D++R+  DYR VN L    A  MPNL+ +   ++G+  F   DL++G+WQMPL P +QE+++ +T   V+TP RVPQG ++++ +FQ  + DV   LLG  C +W+DDI I+A +  E +  LR   E +Q  G+    +K+ +F +E+ WCG++ SG  V HDP R+
Sbjct:  550 NDKSRWACAAVPVRKVGSADSFRITNDYRPVNKLTVPIAGVMPNLDVVLDQVSGSYGFAKFDLMKGFWQMPLHPDSQELMSFMTEDSVFTPLRVPQGAMDSSVHFQNQLQDVFRELLGRHCLIWIDDIIIYAASATEFIVVLRRFFELVQEHGLKLNVNKSVIFCKEVAWCGRLVSGNAVRHDPTRL 736          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A6A3K6I0_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K6I0_9STRA)

HSP 1 Score: 145 bits (365), Expect = 8.950e-37
Identity = 73/189 (38.62%), Postives = 112/189 (59.26%), Query Frame = 0
Query:    1 MFANPQARFSSVAMAV--PKKDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            ++ N  +R+   A+ +  P  D++R   DYR +NN+  + A  MP+LE       G   +   D L+G+WQ+PLD  +QE ++ +T KG++TPTRVPQG  +A  +FQ T+  VL  L+     VW+DD+ ++A T +EL+  +   L +L   G+     K+ LF  E+RWCG+I S A V HDPER+
Sbjct:  543 VYENRASRWCCPALPIRKPGTDSFRQTNDYRPLNNVTEAIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGNTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERI 731          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A6A4E9W8_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4E9W8_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.450e-36
Identity = 73/189 (38.62%), Postives = 111/189 (58.73%), Query Frame = 0
Query:    1 MFANPQARFSSVAMAV--PKKDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            ++ N  +R+   A+ +  P  D++R   DYR +NN+    A  MP+LE       G   +   D L+G+WQ+PLD  +QE ++ +T KG++TPTRVPQG  +A  +FQ T+  VL  L+     VW+DD+ ++A T +EL+  +   L +L   G+     K+ LF  E+RWCG+I S A V HDPER+
Sbjct:  543 VYENRASRWCCPALPIRKPGTDSFRQTNDYRPLNNVTEPIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGNTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLSEVRWCGRIISKAGVGHDPERI 731          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A6A3FJ70_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJ70_9STRA)

HSP 1 Score: 139 bits (350), Expect = 9.190e-35
Identity = 70/187 (37.43%), Postives = 109/187 (58.29%), Query Frame = 0
Query:    4 NPQARFSSVAMAVPK---KDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            N  +R++  A+ V K   KD +R+  DYR VN +    A  +PNL  +   + GA      D+ +G+WQ+PLD  +QEI ++ T +GVYTPTRVPQG +++  +FQ TM +V   ++ +   V+VDD+ ++A T  E +  L     RL+   +     K++L+ + + WCGKI  G+ V HDP RV
Sbjct:  124 NNASRWACAAVPVRKAGLKDAFRLTTDYRPVNRMTVPIAAAVPNLVVVTSRVRGAQAMAKFDMFKGFWQLPLDEDSQEIFSIKTDEGVYTPTRVPQGAVDSAMHFQSTMQEVFGDMMNHNLLVYVDDVVLYAPTHDEFLVVLEKFFRRLRESNLKLNVSKSELYAQAVTWCGKIVDGSGVIHDPSRV 310          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: H3H5Q5_PHYRM (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5Q5_PHYRM)

HSP 1 Score: 137 bits (346), Expect = 9.440e-35
Identity = 68/186 (36.56%), Postives = 110/186 (59.14%), Query Frame = 0
Query:    4 NPQARFSSVAMAV--PKKDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            N ++R++  A+ V  P  D +R   DYR VN+L  + A  MP+L+       G   +   D ++G+WQ+PL   +QE+++ +T +G++TPTRVPQG  +A  +FQ T+ +VL   L     VW+DD+  +A T  +LM  +  +L++L   G      K KLF+ E++WCG+I +   V HDP+R+
Sbjct:  227 NKESRWACAALPVRKPNSDDFRQANDYRPVNSLSEAIAGLMPSLQVRLEKCKGKKFYAIFDFIKGFWQLPLHKDSQELLSYMTDRGIFTPTRVPQGCTDAALHFQSTVEEVLKDYLHECVLVWIDDLLAYADTVMDLMDAIEAILKQLDKFGFKLNPRKCKLFQTEIKWCGRIINKDGVGHDPDRI 412          
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Match: A0A2P4XQ32_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQ32_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.390e-34
Identity = 70/187 (37.43%), Postives = 111/187 (59.36%), Query Frame = 0
Query:    4 NPQARFSSVAMAVPK---KDTYRMVADYRTVNNLIASSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV 187
            N ++R++   + V K    D++R+  DYR VN L    A  MPNL+     ++G+  F   DL++G+WQMPL P +QE+++ +    V+ P RVPQG ++++ +FQ  + DV   LLG  C +W+DDI I+A +  E +  LR   E +Q  G+    +K+ +F +E+ WCG + SG  V HDP R+
Sbjct:  352 NDKSRWACAVVPVRKVGSADSFRITNDYRPVNKLTVPIAGVMPNLDVALDQVSGSHGFAKFDLMKGFWQMPLHPDSQELMSFMREDSVFKPLRVPQGAMDSSVHFQNQLQDVFRELLGRHCLIWIDDIIIYAASATEFIVVLRRFFELVQEHGLKLNVNKSVIFCKEVAWCGHLVSGNAVRHDPTRL 538          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44526.11242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE2.980e-4948.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE4.820e-4846.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE5.500e-4046.28CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6A3GQ28_9STRA1.570e-3738.62Reverse transcriptase domain-containing protein (F... [more]
A0A2P4YDS0_9STRA2.680e-3739.04Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A3K6I0_9STRA8.950e-3738.62Reverse transcriptase domain-containing protein n=... [more]
A0A6A4E9W8_9STRA1.450e-3638.62Reverse transcriptase domain-containing protein n=... [more]
A0A6A3FJ70_9STRA9.190e-3537.43Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
H3H5Q5_PHYRM9.440e-3536.56Reverse transcriptase domain-containing protein n=... [more]
A0A2P4XQ32_9STRA1.390e-3437.43Reverse transcriptase domain-containing protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 13..179
e-value: 9.7E-28
score: 98.7
NoneNo IPR availablePANTHERPTHR24559:SF299coord: 14..160
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 14..160
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 9..187
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 16..172
e-value: 8.1E-14
score: 51.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..175
score: 15.62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44526contigH-paniculata_contig44526:658..1218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44526.11242.1mRNA_H-paniculata_contig44526.11242.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44526 658..1218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44526.11242.1 ID=prot_H-paniculata_contig44526.11242.1|Name=mRNA_H-paniculata_contig44526.11242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MFANPQARFSSVAMAVPKKDTYRMVADYRTVNNLIASSAMPMPNLEEIGR
GMAGASVFCTLDLLQGYWQMPLDPQAQEIVTMVTAKGVYTPTRVPQGVLN
ATSYFQGTMGDVLAGLLGNVCEVWVDDIGIWAGTWQELMRRLRVVLERLQ
VRGIYAAAHKTKLFRREMRWCGKIYSGATVSHDPERV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom