prot_H-paniculata_contig4452.11241.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4452.11241.1
Unique Nameprot_H-paniculata_contig4452.11241.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
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BLAST of mRNA_H-paniculata_contig4452.11241.1 vs. uniprot
Match: A0A6H5K6P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.120e-18
Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 0 
Query:    2 DRCVSASGSE--EEYFYCTDRYKWEWSQEVSQLPYQASDSLCITMDSDVVDGLDNSE 56
            D CVSA+  +  +E+F+CTDRY WEWSQ+  QLP QASDSLC+T+DS VVDGLD +E
Sbjct:   34 DNCVSATSGDNIDEFFFCTDRYSWEWSQDAEQLPVQASDSLCLTLDSSVVDGLDQTE 90
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BLAST of mRNA_H-paniculata_contig4452.11241.1 vs. uniprot
Match: D7G7R5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7R5_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.230e-8
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 
Query:   23 WEWSQEVSQLPYQASDSLCITMDSDVVDGLDNSE 56
            WEWSQ+  QLP QASDSLC+TMDS VVDGLD +E
Sbjct:    3 WEWSQDAEQLPVQASDSLCLTMDSSVVDGLDQTE 36
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4452.11241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6P9_9PHAE1.120e-1864.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7R5_ECTSI1.230e-876.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4452contigH-paniculata_contig4452:13197..13923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4452.11241.1mRNA_H-paniculata_contig4452.11241.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4452 13197..13923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4452.11241.1 ID=prot_H-paniculata_contig4452.11241.1|Name=mRNA_H-paniculata_contig4452.11241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
NDRCVSASGSEEEYFYCTDRYKWEWSQEVSQLPYQASDSLCITMDSDVVD
GLDNSECAKQI*
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