prot_H-paniculata_contig44423.11223.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44423.11223.1
Unique Nameprot_H-paniculata_contig44423.11223.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length189
Homology
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.210e-51
Identity = 88/188 (46.81%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+DPCVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F T   GE +W+ G A  RD+  G +RI+Q   +D++++RFDV++ S +PA+   DLGP+REDE+  + PVR A+GS++W+S  +R +++ AVRAVAR AH P  RHW A+ KI+ YLK T+DLG
Sbjct:  182 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLG 368          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5K616_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K616_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 7.450e-50
Identity = 85/188 (45.21%), Postives = 125/188 (66.49%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+D CVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F T   GE +W+ G A  R +  G +RI+Q   +D+++KRF+ ++ S +PAS  VDLGP+R+DE+  + PVR A+GS++W+S  +R +++ AVRAVA  AH P  RHW A+ KI+ YLK T+DLG
Sbjct:   76 WGYHAADTLVEN-GFEQCKADTCVFRKMADEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERGVEAGTLRISQTAYIDSMVKRFEAQSTSLIPASPGVDLGPKRDDENGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAHHAHAPAKRHWDAIQKILGYLKGTRDLG 262          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 1.150e-49
Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+DPCVFR  K+ VV        D +LVAG   +C  L A+L   F T   GE  W+ G A  RD+  G +RI+Q   +D+++ RFDV++ S++PAS  VD+GP+R+DE   + PVR A+GS++W+S  +R +I+ AVRAVAR AH P +RHWKA+VKI++YLK T+DLG
Sbjct:  158 WGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLG 344          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.660e-49
Identity = 89/188 (47.34%), Postives = 127/188 (67.55%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+DPCVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F T    E +W+ G A  RD+  G +RI+Q   +D+++KRFDV++ S +PAS  VDLGP+R+DE   + PVR A+GS++W+S  +R +++ AVRAVAR AH P  RHW A+ KI+ YLK T+DLG
Sbjct:  449 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLG 635          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.680e-49
Identity = 88/188 (46.81%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+DPCVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F T   GE +W+ G A  RD+  G +RI+Q   +D++++RFDV++ S +PA+   DLGP+REDE+  + PVR A+GS++W+S  +R +++ AVRAVAR AH P  RHW A+ KI+ YLK T+DLG
Sbjct:  895 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLG 1081          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.720e-49
Identity = 88/188 (46.81%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+DPCVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F T   GE +W+ G A  RD+  G +RI+Q   +D++++RFDV++ S +PA+   DLGP+REDE+  + PVR A+GS++W+S  +R +++ AVRAVAR AH P  RHW A+ KI+ YLK T+DLG
Sbjct: 1274 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLG 1460          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.730e-49
Identity = 88/188 (46.81%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+DPCVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F T   GE +W+ G A  RD+  G +RI+Q   +D++++RFDV++ S +PA+   DLGP+REDE+  + PVR A+GS++W+S  +R +++ AVRAVAR AH P  RHW A+ KI+ YLK T+DLG
Sbjct: 1294 WGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLG 1480          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.730e-49
Identity = 88/188 (46.81%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+DPCVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F T   GE +W+ G A  RD+  G +RI+Q   +D++++RFDV++ S +PA+   DLGP+REDE+  + PVR A+GS++W+S  +R +++ AVRAVAR AH P  RHW A+ KI+ YLK T+DLG
Sbjct: 1437 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLG 1623          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 3.630e-49
Identity = 86/188 (45.74%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            W     + LV N G  Q K+DPCVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F T   GE +W+ G A  RD+  G +RI+Q   +D++++RFDV++ S +PA+   DLGP+REDE+  + PVR A+GS++W+S  +R +++ AVRAVAR AH P  RHW A+ KI+ ++K T+DLG
Sbjct:  530 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGFMKGTRDLG 716          
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Match: A0A6H5JYF4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF4_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 3.880e-49
Identity = 86/180 (47.78%), Postives = 123/180 (68.33%), Query Frame = 0
Query:   10 LVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGKSVECDSLFAALRAEFQTTR-GELKWYLGWAFWRDIMRGVVRITQRTIVDTVIKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRSNIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG 188
            LV N G  Q K+DPCVFR   + VV +I+ ++VDD+LVAG   +C+ L A+L  +F TT  GE +W  G A  RD+  G + I+Q   +D+++KRFDV++   +PA+   DLGP+REDE+  + PVR A+GS++W+S  +R +++ AVRAVAR AH P  RHW A+ KI+ YL  T+DLG
Sbjct:   60 LVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTTNPGECQWLDGCAIVRDVEAGTLGISQTAYIDSMVKRFDVQSTYRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARLAHAPAKRHWDAIQKILGYLTETRDLG 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44423.11223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTL3_9PHAE1.210e-5146.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K616_9PHAE7.450e-5045.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCG0_9PHAE1.150e-4947.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE1.660e-4947.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE1.680e-4946.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE1.720e-4946.81Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE1.730e-4946.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.730e-4946.81Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K164_9PHAE3.630e-4945.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF4_9PHAE3.880e-4947.78Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44423contigH-paniculata_contig44423:24..590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44423.11223.1mRNA_H-paniculata_contig44423.11223.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44423 3..590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44423.11223.1 ID=prot_H-paniculata_contig44423.11223.1|Name=mRNA_H-paniculata_contig44423.11223.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
MWSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDVILCVHVDDVLVAGK
SVECDSLFAALRAEFQTTRGELKWYLGWAFWRDIMRGVVRITQRTIVDTV
IKRFDVETESNLPASQQVDLGPRREDEDLSDKPVRSAVGSLIWLSGMTRS
NIASAVRAVARRAHNPMDRHWKAVVKIISYLKRTKDLG*
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