prot_H-paniculata_contig44415.11222.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44415.11222.1
Unique Nameprot_H-paniculata_contig44415.11222.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 88.6 bits (218), Expect = 1.230e-20
Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            +P++  EAL  P+AEKW++A+EEEL  L  N TW   D+   P GRKV++ KW+FKRKL +DG V RYKARLVA+G+
Sbjct:   30 DPETLEEALTSPDAEKWKLAMEEELENLKRNETW---DIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGY 103          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 92.8 bits (229), Expect = 2.670e-20
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    9 LKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            +KGPEAE W+ A+++E+ +L +NGTW+  DL   P GRK +  KWIFKRKL EDG+V RYKARLVAQGF
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTDL---PPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGF 66          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 90.9 bits (224), Expect = 5.240e-20
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            EP S  EA+KGPE EKW+ AI EEL A+  N TW    +  LP GR+ I AKWIFK+KL E+G+V RYKARLVA+G+
Sbjct:  173 EPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTV--VKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGY 247          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A1W7R6H7_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6H7_AEDAL)

HSP 1 Score: 91.7 bits (226), Expect = 7.680e-20
Identity = 48/77 (62.34%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            EP+S  EA++GPE E W+ AI+EEL +  +N TW   DL  LP GRK +  KWIFKRKL E G+VARYKARLVAQGF
Sbjct:  787 EPRSFKEAVEGPECELWKSAIKEELMSHQENKTW---DLVPLPPGRKTVGCKWIFKRKLDEHGNVARYKARLVAQGF 860          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 90.9 bits (224), Expect = 1.410e-19
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            EP S  EA+KGPE EKW+ AI EEL A+  N TW    +  LP GR+ I AKWIFK+KL E+G+V RYKARLVA+G+
Sbjct:  548 EPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTV--VKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGY 622          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A6V7JMB6_9HYME (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JMB6_9HYME)

HSP 1 Score: 84.3 bits (207), Expect = 1.080e-18
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            EP S  EA+ GP+AEKWR+A++EEL +L+ N TW  +   +LP G+  +  KW+FK K   DG   RYKARLVAQGF
Sbjct:   34 EPISYEEAMDGPDAEKWRIAMDEELNSLMSNNTWSVQ---QLPKGKSAVGCKWVFKIKRHADGRPDRYKARLVAQGF 107          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A4S4M1D7_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1D7_9APHY)

HSP 1 Score: 86.3 bits (212), Expect = 6.000e-18
Identity = 40/77 (51.95%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            EP++ AEA++ P+A+KW  A ++E+ + ++NGTWE   L +LP GRK I ++W+F+ K   DGS+ RYKARLVAQGF
Sbjct:  669 EPRTFAEAMRRPDADKWYQAAQDEIKSHLENGTWE---LAQLPEGRKAIGSRWVFRIKYNADGSIERYKARLVAQGF 742          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A1W7R6D9_AEDAL (Putative polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6D9_AEDAL)

HSP 1 Score: 85.9 bits (211), Expect = 8.110e-18
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            EPKS AEAL  PE++KW+ A+ EE+ +L++  TW   D+ +LPA RK I ++W++KRK   +G V R+KARLVAQGF
Sbjct:  643 EPKSYAEALASPESDKWKAAMAEEMASLMEKDTW---DVVQLPADRKAIGSRWVYKRKESANGDVVRFKARLVAQGF 716          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 85.5 bits (210), Expect = 1.120e-17
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            EPK+  EA + P+   W  AI++EL +L +NGTW  EDL   P GR+ + +KW+FK KLK DG+V +YKARLVAQGF
Sbjct:  829 EPKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLEDL---PPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGF 902          
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A3S3PPW2_9ACAR (Gag-pol polyprotein-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PPW2_9ACAR)

HSP 1 Score: 84.7 bits (208), Expect = 2.070e-17
Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 77
            EP +  EAL  PEA KW+ AIEEEL +L  N TW   D+ R P  RKVI  KW+FKRK+K DGS+ RYKARLV +GF
Sbjct:  348 EPSTFKEALLSPEANKWKEAIEEELKSLKANNTWI--DVTR-PKDRKVISNKWVFKRKIKPDGSIERYKARLVVKGF 421          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0015A81C6A1.230e-2055.84uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A182GIT5_AEDAL2.670e-2062.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7K416_LASNI5.240e-2059.74Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A1W7R6H7_AEDAL7.680e-2062.34Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
A0A0J7KM48_LASNI1.410e-1959.74Integrase catalytic domain-containing protein n=2 ... [more]
A0A6V7JMB6_9HYME1.080e-1853.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4M1D7_9APHY6.000e-1851.95Integrase catalytic domain-containing protein (Fra... [more]
A0A1W7R6D9_AEDAL8.110e-1853.25Putative polyprotein (Fragment) n=1 Tax=Aedes albo... [more]
A0A5C3E5T1_9BASI1.120e-1754.55Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A3S3PPW2_9ACAR2.070e-1759.74Gag-pol polyprotein-like protein (Fragment) n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 39..77
e-value: 1.8E-7
score: 31.1
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 1..77
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44415contigH-paniculata_contig44415:1388..1621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44415.11222.1mRNA_H-paniculata_contig44415.11222.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44415 1388..1621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44415.11222.1 ID=prot_H-paniculata_contig44415.11222.1|Name=mRNA_H-paniculata_contig44415.11222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIR
AKWIFKRKLKEDGSVARYKARLVAQGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like