mRNA_H-paniculata_contig44415.11222.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A) HSP 1 Score: 88.6 bits (218), Expect = 1.230e-20 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
+P++ EAL P+AEKW++A+EEEL L N TW D+ P GRKV++ KW+FKRKL +DG V RYKARLVA+G+
Sbjct: 30 DPETLEEALTSPDAEKWKLAMEEELENLKRNETW---DIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGY 103
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 92.8 bits (229), Expect = 2.670e-20 Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 1
Query: 25 LKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
+KGPEAE W+ A+++E+ +L +NGTW+ DL P GRK + KWIFKRKL EDG+V RYKARLVAQGF
Sbjct: 1 MKGPEAELWKAAMDDEMTSLRENGTWQLTDL---PPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGF 66
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI) HSP 1 Score: 90.9 bits (224), Expect = 5.240e-20 Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
EP S EA+KGPE EKW+ AI EEL A+ N TW + LP GR+ I AKWIFK+KL E+G+V RYKARLVA+G+
Sbjct: 173 EPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTV--VKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGY 247
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A1W7R6H7_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6H7_AEDAL) HSP 1 Score: 91.7 bits (226), Expect = 7.680e-20 Identity = 48/77 (62.34%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
EP+S EA++GPE E W+ AI+EEL + +N TW DL LP GRK + KWIFKRKL E G+VARYKARLVAQGF
Sbjct: 787 EPRSFKEAVEGPECELWKSAIKEELMSHQENKTW---DLVPLPPGRKTVGCKWIFKRKLDEHGNVARYKARLVAQGF 860
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI) HSP 1 Score: 90.9 bits (224), Expect = 1.410e-19 Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
EP S EA+KGPE EKW+ AI EEL A+ N TW + LP GR+ I AKWIFK+KL E+G+V RYKARLVA+G+
Sbjct: 548 EPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTV--VKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGY 622
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A6V7JMB6_9HYME (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JMB6_9HYME) HSP 1 Score: 84.3 bits (207), Expect = 1.080e-18 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
EP S EA+ GP+AEKWR+A++EEL +L+ N TW + +LP G+ + KW+FK K DG RYKARLVAQGF
Sbjct: 34 EPISYEEAMDGPDAEKWRIAMDEELNSLMSNNTWSVQ---QLPKGKSAVGCKWVFKIKRHADGRPDRYKARLVAQGF 107
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A4S4M1D7_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1D7_9APHY) HSP 1 Score: 86.3 bits (212), Expect = 6.000e-18 Identity = 40/77 (51.95%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
EP++ AEA++ P+A+KW A ++E+ + ++NGTWE L +LP GRK I ++W+F+ K DGS+ RYKARLVAQGF
Sbjct: 669 EPRTFAEAMRRPDADKWYQAAQDEIKSHLENGTWE---LAQLPEGRKAIGSRWVFRIKYNADGSIERYKARLVAQGF 742
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A1W7R6D9_AEDAL (Putative polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6D9_AEDAL) HSP 1 Score: 85.9 bits (211), Expect = 8.110e-18 Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
EPKS AEAL PE++KW+ A+ EE+ +L++ TW D+ +LPA RK I ++W++KRK +G V R+KARLVAQGF
Sbjct: 643 EPKSYAEALASPESDKWKAAMAEEMASLMEKDTW---DVVQLPADRKAIGSRWVYKRKESANGDVVRFKARLVAQGF 716
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI) HSP 1 Score: 85.5 bits (210), Expect = 1.120e-17 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
EPK+ EA + P+ W AI++EL +L +NGTW EDL P GR+ + +KW+FK KLK DG+V +YKARLVAQGF
Sbjct: 829 EPKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLEDL---PPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGF 902
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Match: A0A3S3PPW2_9ACAR (Gag-pol polyprotein-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PPW2_9ACAR) HSP 1 Score: 84.7 bits (208), Expect = 2.070e-17 Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 1 EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRAKWIFKRKLKEDGSVARYKARLVAQGF 231
EP + EAL PEA KW+ AIEEEL +L N TW D+ R P RKVI KW+FKRK+K DGS+ RYKARLV +GF
Sbjct: 348 EPSTFKEALLSPEANKWKEAIEEELKSLKANNTWI--DVTR-PKDRKVISNKWVFKRKIKPDGSIERYKARLVVKGF 421 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44415.11222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig44415.11222.1 >prot_H-paniculata_contig44415.11222.1 ID=prot_H-paniculata_contig44415.11222.1|Name=mRNA_H-paniculata_contig44415.11222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp EPKSAAEALKGPEAEKWRVAIEEELGALVDNGTWESEDLGRLPAGRKVIRback to top mRNA from alignment at H-paniculata_contig44415:1388..1621+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig44415.11222.1 ID=mRNA_H-paniculata_contig44415.11222.1|Name=mRNA_H-paniculata_contig44415.11222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=234bp|location=Sequence derived from alignment at H-paniculata_contig44415:1388..1621+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig44415:1388..1621+ >mRNA_H-paniculata_contig44415.11222.1 ID=mRNA_H-paniculata_contig44415.11222.1|Name=mRNA_H-paniculata_contig44415.11222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at H-paniculata_contig44415:1388..1621+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |