prot_H-paniculata_contig44413.11221.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44413.11221.1
Unique Nameprot_H-paniculata_contig44413.11221.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length235
Homology
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: H3H7D1_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7D1_PHYRM)

HSP 1 Score: 154 bits (390), Expect = 4.870e-43
Identity = 93/233 (39.91%), Postives = 144/233 (61.80%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTP-FVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGRREKAD-EFKHNISQRFRMEDLAPLSH 227
            A++  DA KW+ A + E  +L+KN T    D   LP GRKAI  +W+F+ K     ++ R+KARLV +GFSQ  G D+ ET APVA+ +++R V SLAA++   +  MDV  A+LN  ++E++++     +     D P  V  L++SLY LKQS R WN T++DF++++GF +  ++  +Y+ RD  G+  + VA+YVDDLV+A   +K   + K  +S RF M D+  L +
Sbjct:    8 AMESSDAAKWKEACDSECDSLLKNDT---WDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRD--GQDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKY 233          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: H3H8P6_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8P6_PHYRM)

HSP 1 Score: 155 bits (393), Expect = 9.450e-43
Identity = 93/233 (39.91%), Postives = 145/233 (62.23%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTP-FVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGRREKA-DEFKHNISQRFRMEDLAPLSH 227
            A++  DA KW+ A + E  +L+KN T    D   LP GRKAI  +W+F+ K     ++ R+KARLV +GFSQ    D+ ET APVA+ +++R V SLAA++   +  MDV  A+LN  ++E++++     +     D P  V  L++SLY LKQS R WN T++DF++++GF +  ++  +Y+ RD  G+  + VA+YVDDLV+A   ++  +  KH +S+RF M DL  L +
Sbjct:   30 AMESTDAVKWKEACDSECDSLLKNDT---WDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYDIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEY 255          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 9.710e-43
Identity = 92/234 (39.32%), Postives = 147/234 (62.82%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKLK----VARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRD--TPFVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGRR-EKADEFKHNISQRFRMEDLAPLSH 227
            A++  +A KW+ A E E  +L+ N T    D   LP GRKAI  KW+FK K K    + +YKARLV +G+SQ  G D+ ET  PVA+ +++R + SLAA+H+ +++ MDV+ A+LN+ ++E++++++    +       +  V  L+KSLY LKQ+ R WN T++ F++ IGF +   +  +Y+ R +  E  +LV++YVDDL++A    E     K  +S+RF+M DL PLS+
Sbjct:   51 AMESDNASKWKDACESEIKSLLDNKT---WDVVELPQGRKAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKPVLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQD--EDIILVSLYVDDLILASNSDEMMQTTKIALSKRFKMTDLGPLSY 279          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: H3H9Y1_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9Y1_PHYRM)

HSP 1 Score: 160 bits (404), Expect = 3.040e-42
Identity = 95/233 (40.77%), Postives = 146/233 (62.66%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTP-FVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGRREKA-DEFKHNISQRFRMEDLAPLSH 227
            A++  DA KW+ A + E  +L+KN T    D   LP GRKAI  +W+F+ K     ++ R+KARLV +GFSQ  G D+ ET APVA+ +++R V SLAA++   +  MDV  A+LN  ++E++++     +     D P  V  L++SLY LKQS R WN T++DF++++GF +  ++  +Y+ RD  G+  + VA+YVDDLV+A   ++  D  KH +S+RF M DL  L +
Sbjct:  289 AMESSDAVKWKEACDSECDSLLKNDT---WDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLDSTKHALSKRFEMTDLGELEY 514          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 159 bits (401), Expect = 4.030e-42
Identity = 97/231 (41.99%), Postives = 139/231 (60.17%), Query Frame = 0
Query:    2 LKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTPFVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIA-GRREKADEFKHNISQRFRMEDLAPLSH 227
            +KGP+AE W+AAM++E  +L +NGT +  D   LP GRKA+  KWIFKRKL     V RYKARLV QGF+Q  G D+ E  APV R  T R + ++A++    ++  DV  AYLN  +EE +F++  P +   +RD   V  L+KSLY LKQ+G  WN   +  L  + F +   +  LYV R+  G T L++  YVDD+VIA    E+ +E    +++ F++  L  +SH
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVI--YVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISH 224          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: H3H7U0_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7U0_PHYRM)

HSP 1 Score: 158 bits (400), Expect = 4.820e-42
Identity = 94/233 (40.34%), Postives = 146/233 (62.66%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTP-FVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGRREKA-DEFKHNISQRFRMEDLAPLSH 227
            A++  DA KW+ A + E  +L+KN T    D   LP GRKAI  +W+F+ K     ++ R+KARLV +GFSQ  G D+ ET APVA+ +++R V SLAA++   +  MDV  A+LN  ++E++++     +     D P  V  L++SLY LKQS R WN T++DF++++GF +  ++  +Y+ RD  G+  + VA+YVDDLV+A   ++  +  KH +S+RF M DL  L +
Sbjct:  167 AMESSDAVKWKEACDSECDSLLKNDT---WDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEY 392          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: H3HA00_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HA00_PHYRM)

HSP 1 Score: 158 bits (400), Expect = 1.320e-41
Identity = 94/233 (40.34%), Postives = 146/233 (62.66%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTP-FVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGRREKA-DEFKHNISQRFRMEDLAPLSH 227
            A++  DA KW+ A + E  +L+KN T    D   LP GRKAI  +W+F+ K     ++ R+KARLV +GFSQ  G D+ ET APVA+ +++R V SLAA++   +  MDV  A+LN  ++E++++     +     D P  V  L++SLY LKQS R WN T++DF++++GF +  ++  +Y+ RD  G+  + VA+YVDDLV+A   ++  +  KH +S+RF M DL  L +
Sbjct:  164 AMESSDAVKWKEACDSECDSLLKNDT---WDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEY 389          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: H3H4L3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4L3_PHYRM)

HSP 1 Score: 158 bits (400), Expect = 9.550e-41
Identity = 95/233 (40.77%), Postives = 146/233 (62.66%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTP-FVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGRREKA-DEFKHNISQRFRMEDLAPLSH 227
            A++  DA KW+ A + E  +L+KN T    D   LP GRKAI  +W+F+ K     +V R+KARLV +GFSQ  G D+ ET APVA+ +++R V SLAA++   +  MDV  A+LN  ++E++++     +     D P  V  L++SLY LKQS R WN T++DF++++GF +  ++  +Y+ RD  G+  + VA+YVDDLV+A   ++  +  KH +S+RF M DL  L +
Sbjct:  662 AMESSDAVKWKEACDSECDSLLKNDT---WDVVPLPKGRKAIGCRWVFRVKENQAGEVERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEY 887          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 157 bits (397), Expect = 2.490e-40
Identity = 95/234 (40.60%), Postives = 137/234 (58.55%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTP--FVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGR-REKADEFKHNISQRFRMEDLAPLSH 227
            AL GPD++ WR A+++E  +  +N  +E      +P G K I +K + K K      + RYK R+V +GF+Q EG D+ E  APVA + ++R + +LAA+HD +++ MDV  AYLN  + E+L++       P   D P      L+KSLY LKQ+GR WN T +  L ++GF R    + LYV R EGG+   LV VYVDDL++A   R   DE K  ++  F+M DL P S+
Sbjct: 1009 ALNGPDSKHWREALDDELNSFEENDVKEVVP---IPEGVKPITSKIVPKIKFDANGNIERYKIRIVARGFTQREGVDYQEVFAPVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYL-----LPPDGVDIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASY 1233          
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Match: H3H1B2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1B2_PHYRM)

HSP 1 Score: 153 bits (387), Expect = 2.560e-40
Identity = 93/233 (39.91%), Postives = 143/233 (61.37%), Query Frame = 0
Query:    1 ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKRKL----KVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFDIEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTP-FVRPLRKSLYDLKQSGRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIAGRREKAD-EFKHNISQRFRMEDLAPLSH 227
            A++  DA KW+ A + E  +L+KN T    D   LP GRKAI  +W+F+ K     ++ R+KARLV +GFSQ  G D+ ET APVA+ +++R V SLAA++   +  MDV  A+LN  ++E++++     +     D P  V  L++SLY LKQS R WN T++DF++++GF +  ++  +Y+ RD  G   + VA+YVDDLV+A   +K   + K  +S RF M D+  L +
Sbjct:   30 AMESSDAVKWKEACDSECDSLLKNDT---WDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRD--GHDMIFVALYVDDLVLASSSDKMLLDTKQALSHRFEMTDMGQLKY 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44413.11221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3H7D1_PHYRM4.870e-4339.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H8P6_PHYRM9.450e-4339.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0WHK2_9STRA9.710e-4339.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H9Y1_PHYRM3.040e-4240.77CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A182GIT5_AEDAL4.030e-4241.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7U0_PHYRM4.820e-4240.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3HA00_PHYRM1.320e-4140.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H4L3_PHYRM9.550e-4140.77Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
A0A409WVI7_9AGAR2.490e-4040.60Integrase catalytic domain-containing protein (Fra... [more]
H3H1B2_PHYRM2.560e-4039.91Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 35..226
e-value: 1.2E-53
score: 182.2
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 8..200
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44413contigH-paniculata_contig44413:82..786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44413.11221.1mRNA_H-paniculata_contig44413.11221.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44413 82..786 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44413.11221.1 ID=prot_H-paniculata_contig44413.11221.1|Name=mRNA_H-paniculata_contig44413.11221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp
ALKGPDAEKWRAAMEEEWGALVKNGTRESEDPGRLPAGRKAIRTKWIFKR
KLKVARYKARLVTQGFSQVEGKDFSETSAPVARMSTLRSVFSLAAEHDFD
IEGMDVDAAYLNAPVEEELFVKLTPEFSPFSRDTPFVRPLRKSLYDLKQS
GRNWNNTLNDFLIEIGFNRFTTNSWLYVSRDEGGETNLLVAVYVDDLVIA
GRREKADEFKHNISQRFRMEDLAPLSHSRRRIVLC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like