mRNA_H-paniculata_contig444.11216.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 8.370e-13 Identity = 91/360 (25.28%), Postives = 133/360 (36.94%), Query Frame = 1
Query: 292 RRALLGWGDCVLSAVLNAAGAKEWSEWLRVPLEHALMSGQTHLAKKLVEAGADCSAGYGVLGQRTLLTAATFGAGQGAVQMVLDVGVAADLNLSEKDDLGMAPLHFAVLKADHDAIRLLCSRGASPQVRNNEGSTPLHMASVMGDEEATFE---------------------------------------------------LLKSLDGGGHDXXXXXXXXXXXYAASNRATRRDLSGWRRVNSPPFSHVAVICRLLMAGADVETR-NSAGYTPLRIAVTELFPDAVRVLLRHGADETSISNDDSTMAASLREARDFYRDRVGPGGAPAVEALVSHVSDMLARAPADRAWRRRGWLVMLR 1215
+ L G GD +L V + A ++W++WLRVPLEHA +G L +KL++ GA+ SAG+ RTL+ A G + + M+ G +N + G+ PLH AV A ++L GA + + L +LD G + T V++ S+ A + LL GAD+ + G T L A + PDA +LLR GADET++ + +T +A + D PA+ L +L A DR WRRRG LVM R
Sbjct: 8 KSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYIN-DQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHALDAGHISTVNVSLGWGCLWLEPTSKTCIAGRPPLCVSTFSISYFAAMLALLKLGADLHAKCPHNGMTALHTACHVVNPDAADLLLRWGADETAVDWNGATTSAVIPRI-----DEAPEENGPAILRLTK----LLKFADQDRTWRRRGLLVMCR 357
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 1.970e-12 Identity = 54/145 (37.24%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 322 VLSAVLNAAGAKEWSEWLRVPLEHALMSGQTHLAKKLVEAGADCSAGYGVLGQRTLLTAATFGAGQGAVQMVL-DVGVAADLNLSEKDDLGMAPLHFAVLKADHDAIRLLCSRGASPQVRNNEGSTPLHMASVMGDEEATFELLK 753
+ V A + +W EWLR PLEHA G L +L++AGAD SAG+ RTLL AA +G + V+ +L + G D+N+ D L A LH A + D R+L GA P + ++ G +PLH+A+ G LL+
Sbjct: 72 IFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESA-LHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLLR 215
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 3.590e-12 Identity = 72/231 (31.17%), Postives = 94/231 (40.69%), Query Frame = 1
Query: 559 DLNLSEKD---DLGMAPLHFAV-----LKADHDAIRLLCSRGASPQVR--NNEGSTPLHMASVMGDEEATFELLKSLDGGGHDXXXXXXXXXXXYAASNRATRRDLSGWRRVNSPPFSHVAVICRLLMAGADVETRNSAGYTPLRIAVTELFPDAVRVLLRHGADETSISNDDSTMA--ASLREARDFYRDRVGPGGAPAVEALVSHVSDMLARAPADRAWRRRGWLVMLR 1215
D SE D DLG A LH+ ++ DA+R+L GA V+ N+ +TPLH+A ++ W + IC LL GA++ R + TPL IA T L V +LLR GADE +ND T A + E D + EA + MLARAPADR+WRRRGWLV+ R
Sbjct: 266 DKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLA--------------------------------------------VNRW-------MTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEER--------EADNQRIHRMLARAPADRSWRRRGWLVLSR 437
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 8.480e-12 Identity = 103/378 (27.25%), Postives = 145/378 (38.36%), Query Frame = 1
Query: 292 RRALLGWGDCVLSAVLNAAGAKEWSEWLRVPLEHALMSGQTHLAKKLVEAGADCSAGYGVLGQRTLLTAATFGAGQGAVQMVLDVGVAADLNLSEKDDLGMAPLHFAVLKADHDAIRLLCSRGASPQVRNNEGSTPLHMASVMGDEEATFELLKSLDGGGHDXXXXXXXXXXXYAASNRATRRDLSGWRRVNSPPFSHVAVICRLLMAGADVETRN-------------------------------------------------------------------SAGYTPLRIAV--TELFPDA-VRVLLRHGADETSISNDDSTMAASLREARDFYRDRVGPGGAPAVEALVSHVSDMLARAPADRAWRRRGWLVMLR 1215
RR G G + V ++A ++W EWLRVPLEHA G +L L+EAGAD SAG+ RTL+ AA G + V +L G D+N+ + L+ A + DA R L + GA + GS + +G+ T ++ G XXXXXXXX T RD+ +++ + + G TPL A ++ +A V +LL+ GADET++ ND +T A D+ + G A + V +LARAPA+RAWRRR WLVMLR
Sbjct: 7 RRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSK-RSSLYTATVCGHKDAARRLITAGADVNFEDPTGS----ILGCLGNGGVTPQIYACGSG-------XXXXXXXXXXXXXXXTIRDVDRHSALDNAVCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGTTPLHRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPA-------DWLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLR 365
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: D7FY50_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY50_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 3.500e-11 Identity = 52/115 (45.22%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 883 HVAVICRLLMAGADVETRNSAGYTPLRIAVTELFPDAVRVLLRHGADETSISNDDSTMAASLREARDFYRDRVGPG--GAPAVEALVSHVSDMLARAPADRAWRRRGWLVMLRRR 1221
H + L+ AGADV+ N TPL +A L P VR LLRH ADE N+D F D VG G E +V + +MLARAPADR WRRRGWL MLR R
Sbjct: 249 HAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEV-FRNEDLA----------FPDDVVGHAVAGDKRDEEVVEWIYEMLARAPADRVWRRRGWLAMLRAR 352
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: A0A6H5JZY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY3_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 9.190e-11 Identity = 81/272 (29.78%), Postives = 121/272 (44.49%), Query Frame = 1
Query: 478 QRTLLTAATFGAGQGAVQMVLDVGVAADLNLSEKDDLGMAPLHFAVLKADHDAI----RLLCSRGASPQVRNNEGSTPLHMASVMGDEEATFELL-----KSLDGGGHDXXXXXXXXXXXYAASNRAT--------RRDLSGWRRVNSPPFSHVAVICRL---------LMAGADVETRNSAGYTPLRIAVTELFPDAVRVLLRHGADETSISNDDSTMAASLREARDFYRDRVGPGGAPAVEALVSHVSDMLARAPADRAWRRRGWLVMLR 1215
+ TL AA +GA + + +++ AAD N +D +G +PLH A KA + + R+L +GA PLH+A+ G EL+ K +D G + + A + AT + D + R +P HVAV R+ L GA+V RN TPL +A + V +LL GADE ++ D+ A + + + ++A + MLARAPADR+WRRRGWLV+ R
Sbjct: 29 ESTLHVAAAWGAEEPCMALMV---AAADPN--PRDQVGFSPLHIAA-KAGYGRVDAYTRILLGQGAQAHAETVFQDIPLHLATSQGHALGISELVLGGADKDVDDG--NGSEVNGSDYQGHTALHNATVIEGPGPGQDDQATGDRCYTP--LHVAVDRRIASIGTTRAVLERGANVNARNDNDLTPLHVACSWSSLAVVELLLLWGADE-KLTGDNRVSPADI-----IGVSLLDGSNSQEIQADHQRIRQMLARAPADRSWRRRGWLVLSR 284
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 9.730e-11 Identity = 94/352 (26.70%), Postives = 135/352 (38.35%), Query Frame = 1
Query: 352 AKEWSEWLRVPLEHALMSGQTHLAKKLVEAGADCSAGYGVLGQRTLLTAATFGAGQGAVQMVLDVGVAADLNLSEKDDLGMAPLHFAVLKADHDAIRLLCSRGASPQVRNNEGS------------------------TPLHMASVMGDEEATFELLKSLDGG-----GHDXXXXXXXXXXXYAASNRATRRDLSGWRRVNSPPFSHVAVICRLLM-AGADVETRNSAGY----TPLRIAVTELFPDAVRVLLRHGADETSISNDDSTMAASLRE------------------ARDFYRDRVGPGGAPAVEALVSHVSD----------MLARAPADRAWRRRGWLVMLRRR 1221
++EW EWLRVPL A+ SG L +L++ G D + LG+ T L + AD+N + + G PLH AV + + L + GA+P N +G S G E+ + + GH A+S SGW ++ + A +L+ AGAD + + G TPL A + +A+RVLLR+GAD +D+ +M L A + ++ G A + L H D +LARAPADRAWRRRGW+VMLR R
Sbjct: 31 SEEWVEWLRVPLNCAVTSGNEDLVTRLLDTGGDVNR-LDHLGRSTTL-----------------ISAGADVNDRDPAE-GCYPLHAAVRRGCDRVVADLLAAGAAPN--NTDGXXXXXXXXXXXXXXXXXXXXXXXXXAEFTFESCAGYVVIASEVFPNAEINVATQLGHVGVIKAFLEHGVDASSQACPA---SGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNK-PDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRAR 357
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 3.310e-10 Identity = 53/150 (35.33%), Postives = 68/150 (45.33%), Query Frame = 1
Query: 292 RRALLGWGDCVLSAVLNAAGAKEWSEWLRVPLEHALMSGQTHLAKKLVEAGADCSAGYGVLGQRTLLTAATFGAGQGAVQMVLDVGVAADLNLSEKDDLGMAPLHFAVLKADHDA------IRLLCSRGASPQVRNNEGSTPLHMASVMG 723
RR L G + V A ++W EWLRVPLEHA G +L L+EAGAD SAG+ RTL+ AA G + V +L G D+N A V +H A + L RGA ++ G+TPL A G
Sbjct: 7 RRLLQGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHAARGLDRIVSALLLRGAYTDAQDTSGATPLIYACGSG 156
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 3.310e-10 Identity = 49/111 (44.14%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 904 LLMAGADVETRNSAGYTPLRIAVTELFPD---AVRVLLRHGADETSISNDDSTMAASLREARDFYRDRVGP--GGAPAVEALVSHVSDMLARAPADRAWRRRGWLVMLRRR 1221
L GA V R + GYTPL E AV +LLR GADET+++ ++ A DF R G G PA + + +L+RAPADRAWRRRGWLVMLR R
Sbjct: 4 LFQHGAQVGVRGNQGYTPLHETCWERHEGLEAAVDMLLRWGADETTLNYGGASPA-------DFLGGRYGKVIGHNPAPQDEIDRTRLLLSRAPADRAWRRRGWLVMLRSR 107
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 1.490e-9 Identity = 95/339 (28.02%), Postives = 136/339 (40.12%), Query Frame = 1
Query: 313 GDCVLSAVLNAAGAKE--WSEWLRVPLEHALMSGQTHLAKKLVEAGADCSAGYGVLGQRTLLTAATFGAGQG---AVQMVLDVGVAADLNLSEKDDLGMAPLHFAVLKADHDAIRLLCSRGASPQVRNNEGSTPLHMASVMGDEEATFELLKSLDGGGHDXXXXXXXXXXXYAASNRATRRDLSGWRRVNSPPFSHVAVICRLLMAGADVETRNSAGYTPLRIAVTELFPDAVR----VLLRHGADETSISNDDSTMAASLREARDFYRDRVGPGGAPAVEALVSHVSDMLARAPADRAWRRRGWLVMLRRRVCMMRRIRGAMEHRQRVGGDAVSAVMG 1302
G V A L A GAK+ R PL A+ +G K L+ A D S Y + + + F A +G ++ +L GV +++ + D G LH A L AI +L GA +V +++ TP LD A SN H A + L GA++E R+ G TPL IA + V +LLR GADET+++ D T A + ++ P + + V D+L APADRAWRRRG LV+ R RR+R A + +G A+S +G
Sbjct: 98 GQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRS--YSVLDFAAQKGDACVLRAILQHGV----DVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPF------------------LD-----------------ACSNHC-----------------HEAALA-LFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEY-------AACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMSVSIG 369 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig444.11216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig444.11216.1 >prot_H-paniculata_contig444.11216.1 ID=prot_H-paniculata_contig444.11216.1|Name=mRNA_H-paniculata_contig444.11216.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=449bp MTENMERDEMNGRRALLGWGDCVLSAVLNAAGAKEWSEWLRVPLEHALMSback to top mRNA from alignment at H-paniculata_contig444:502..8319- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig444.11216.1 ID=mRNA_H-paniculata_contig444.11216.1|Name=mRNA_H-paniculata_contig444.11216.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7818bp|location=Sequence derived from alignment at H-paniculata_contig444:502..8319- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig444:502..8319- >mRNA_H-paniculata_contig444.11216.1 ID=mRNA_H-paniculata_contig444.11216.1|Name=mRNA_H-paniculata_contig444.11216.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2694bp|location=Sequence derived from alignment at H-paniculata_contig444:502..8319- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |