prot_H-paniculata_contig4439.11215.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4439.11215.1
Unique Nameprot_H-paniculata_contig4439.11215.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
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BLAST of mRNA_H-paniculata_contig4439.11215.1 vs. uniprot
Match: D7FZQ4_ECTSI (Helicase ATP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZQ4_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.970e-31
Identity = 65/70 (92.86%), Postives = 67/70 (95.71%), Query Frame = 0 
Query:    1 MRRLRKIGGILMTLHNVLMMGAPYDLLEKIFRKCCVRVKYIIADQLAVEAKQEDESEYEGGGG-TYTGGE 69
            MRRLRKIGGILMTLHNVLMM APYDLLEK+FRKCCVRVKYIIADQLAVEAKQEDESEYEGGGG +Y GGE
Sbjct: 1102 MRRLRKIGGILMTLHNVLMMEAPYDLLEKLFRKCCVRVKYIIADQLAVEAKQEDESEYEGGGGASYNGGE 1171
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BLAST of mRNA_H-paniculata_contig4439.11215.1 vs. uniprot
Match: A0A836CAV0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV0_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.150e-11
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:    2 RRLRKIGGILMTLHNVLMMGAPYDLLEKIFRKCCVRVKYIIADQLAVEAKQEDESEYE 59
            +RLRK+GG+LM LHNVLM+  PYD+LE + RK   R+KYIIA+ +  E+K +D SE E
Sbjct: 1055 KRLRKLGGVLMVLHNVLMLEDPYDVLETLLRKSFARIKYIIAEVVMEESKLDDASELE 1112
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4439.11215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZQ4_ECTSI2.970e-3192.86Helicase ATP-binding domain-containing protein n=2... [more]
A0A836CAV0_9STRA2.150e-1156.90P-loop containing nucleoside triphosphate hydrolas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4439contigH-paniculata_contig4439:12384..13309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4439.11215.1mRNA_H-paniculata_contig4439.11215.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4439 10298..13454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4439.11215.1 ID=prot_H-paniculata_contig4439.11215.1|Name=mRNA_H-paniculata_contig4439.11215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MRRLRKIGGILMTLHNVLMMGAPYDLLEKIFRKCCVRVKYIIADQLAVEA
KQEDESEYEGGGGTYTGGEEGEAPSTAAVAATAAGASSSVEESKGK*
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