prot_H-paniculata_contig4433.11207.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4433.11207.1
Unique Nameprot_H-paniculata_contig4433.11207.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4433.11207.1 vs. uniprot
Match: A0A6H5JC23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC23_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.040e-24
Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 0 
Query:    1 AGPGNYTTGNEPELLSESPSRRDFTFGTAARESLALMTSSPGVLYKVDGVFKDGPVGGKIL 61
            +GP NY TGNE ELLSESPSRRD TFGTAARES+ LMT+SPGVLY VDGVF++GPV GKIL
Sbjct:   72 SGPANYKTGNEYELLSESPSRRDITFGTAARESMHLMTASPGVLYNVDGVFRNGPVKGKIL 132
[Close]
BLAST of mRNA_H-paniculata_contig4433.11207.1 vs. uniprot
Match: D8LG21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG21_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.010e-23
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0 
Query:    1 AGPGNYTTGNEPELLSESPSRRDFTFGTAARESLALMTSSPGVLYKVDGVFKDGPVGGKIL 61
            +GP NY TGNE E+LSESPSRRD TFGTAARES+ LMT+SPGVLY VDGVF++GPV GKIL
Sbjct:  136 SGPANYKTGNEYEVLSESPSRRDITFGTAARESMDLMTASPGVLYNVDGVFRNGPVKGKIL 196
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4433.11207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JC23_9PHAE1.040e-2480.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG21_ECTSI1.010e-2378.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4433contigH-paniculata_contig4433:10868..11669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4433.11207.1mRNA_H-paniculata_contig4433.11207.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4433 10868..11669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4433.11207.1 ID=prot_H-paniculata_contig4433.11207.1|Name=mRNA_H-paniculata_contig4433.11207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
AGPGNYTTGNEPELLSESPSRRDFTFGTAARESLALMTSSPGVLYKVDGV
FKDGPVGGKIL
back to top