prot_H-paniculata_contig44310.11203.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44310.11203.1
Unique Nameprot_H-paniculata_contig44310.11203.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length46
Homology
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BLAST of mRNA_H-paniculata_contig44310.11203.1 vs. uniprot
Match: A0A6H5JQZ7_9PHAE (CTP_transf_like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQZ7_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 2.490e-9
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:    1 MCPGGTLTVGVTSDEMLKNKSNVHLVASLPDRLEGVREFLR 41
            MC GGTLTVGV SD MLK KSN  +++SLP+RL GV  FLR
Sbjct:  326 MCEGGTLTVGVASDSMLKAKSNAKMLSSLPERLAGVTNFLR 366
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44310.11203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JQZ7_9PHAE2.490e-968.29CTP_transf_like domain-containing protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 2..44
e-value: 6.6E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44310contigH-paniculata_contig44310:1249..1386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44310.11203.1mRNA_H-paniculata_contig44310.11203.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44310 1249..1386 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44310.11203.1 ID=prot_H-paniculata_contig44310.11203.1|Name=mRNA_H-paniculata_contig44310.11203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp
MCPGGTLTVGVTSDEMLKNKSNVHLVASLPDRLEGVREFLRCARI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold