mRNA_H-paniculata_contig4431.11202.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: D7FPW6_ECTSI (AN1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPW6_ECTSI) HSP 1 Score: 213 bits (541), Expect = 2.660e-62 Identity = 115/206 (55.83%), Postives = 133/206 (64.56%), Query Frame = 3
Query: 135 MEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKLRCSAPGCRGSEFVKVSCKSCAKNFCFRHRHEDDHKCEVAAAIATTR-------RRAGPTAGGPVSNPRQAL-TGARSSTSIGQGCAVEAKAAADRR 728
MEFHD+G HC+AE C QQ DFLPFTC+ C VFCL HRTHA H+CTNAN DKRVLECS CNKVL+ GV + L+RH+ SGC++GVRK RPNK+RCS GCR SEFVKVSC SC +NFCF+HRHEDDHKCE A A AT R R G T GGP P + +G + + + C V A AA RR
Sbjct: 1 MEFHDVGVHCAAEMCGQQ--------------DFLPFTCDACGKVFCLDHRTHAGHNCTNANAKDKRVLECSKCNKVLQRPAGVEHALLLERHLASGCVDGVRKARPNKIRCSVQGCRRSEFVKVSCGSCRRNFCFKHRHEDDHKCE-AIAEATKREHPHLQKRGLGGT-GGPKPKPSDSRPSGGKEAAGGRRPCGVAAAEAAARR 190
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: B3RKG7_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RKG7_TRIAD) HSP 1 Score: 118 bits (295), Expect = 1.110e-27 Identity = 56/155 (36.13%), Postives = 81/155 (52.26%), Query Frame = 3
Query: 144 HDL---GKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKL-RCSAPGCRGSEFVKVSCKSCAKNFCFRHRHEDDHKCEVAAAIAT 596
HDL G+HCS + CNQ LDFLPFTCN C+ +FCL HR+H H C D ++ C C+K+++ P ++ + ++RH+ SGC + V +K +CS CR E + C C ++C RHRH +DH C A+
Sbjct: 3 HDLLSIGRHCSVKDCNQ--------------LDFLPFTCNDCHKIFCLNHRSHVAHQCKAFADKDVKIATCPLCDKLIRRDPKLNLNDQVERHIMSGCKDNVASEGSSKSNKCSMKQCRTHELIPFKCLRCHHDYCARHRHMEDHHCHTIPVTAS 143
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: UPI001EB0253B (AN1-type zinc finger protein 2A-like isoform X2 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB0253B) HSP 1 Score: 119 bits (297), Expect = 1.200e-27 Identity = 58/149 (38.93%), Postives = 75/149 (50.34%), Query Frame = 3
Query: 135 MEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKL--RCSAPGCRGSEFVKVSCKSCAKNFCFRHRHEDDHKCE 575
MEF LGKHC C Q LDFLP C+ C+ +FC H + TH CT + D +V C CN+ + + G D + RH+ + C + K R +CS GC+ E V V C C +NFCFRHRHE DHKC+
Sbjct: 1 MEFPSLGKHCFESSCKQ--------------LDFLPMKCDACSSIFCRDHIKYDTHSCTESYKKDNQVPVCPLCNEAISVKKGDLPDAVVSRHIDNDCSSDLAKQRRKIYTNKCSFKGCKQKELVPVKCDKCHQNFCFRHRHETDHKCQ 135
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: UPI0006150D69 (AN1-type zinc finger protein 2A-like isoform X1 n=2 Tax=Megachile rotundata TaxID=143995 RepID=UPI0006150D69) HSP 1 Score: 120 bits (301), Expect = 1.750e-27 Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 3
Query: 132 KMEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKL--RCSAPGCRGSEFVKVSCKSCAKNFCFRHRHEDDHKC 572
KMEF +LG+HCS CN+ LDFLP C+ C+ +FC +H +++ H C +A D +V C CN + ++ G D+ + +HM + C +RK R RCS+ GC+ E V++ C C KNFC +HRH DH+C
Sbjct: 22 KMEFPNLGEHCSENSCNR--------------LDFLPLKCDACSAIFCAEHISYSNHSCPSAYKKDIQVPVCPLCNAPVPTKRGDPPDIAVGQHMDNECQSDLRKPRQKIFSNRCSSKGCKIKEIVQIRCSDCGKNFCLKHRHPTDHEC 156
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: UPI001EB02C0A (AN1-type zinc finger protein 2A-like isoform X1 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB02C0A) HSP 1 Score: 119 bits (297), Expect = 2.090e-27 Identity = 58/149 (38.93%), Postives = 75/149 (50.34%), Query Frame = 3
Query: 135 MEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKL--RCSAPGCRGSEFVKVSCKSCAKNFCFRHRHEDDHKCE 575
MEF LGKHC C Q LDFLP C+ C+ +FC H + TH CT + D +V C CN+ + + G D + RH+ + C + K R +CS GC+ E V V C C +NFCFRHRHE DHKC+
Sbjct: 1 MEFPSLGKHCFESSCKQ--------------LDFLPMKCDACSSIFCRDHIKYDTHSCTESYKKDNQVPVCPLCNEAISVKKGDLPDAVVSRHIDNDCSSDLAKQRRKIYTNKCSFKGCKQKELVPVKCDKCHQNFCFRHRHETDHKCQ 135
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: A0A443S8T2_9ACAR (AN1-type zinc finger protein 2A-like protein n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443S8T2_9ACAR) HSP 1 Score: 119 bits (298), Expect = 5.690e-27 Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 3
Query: 135 MEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKL---RCSAPGCRGSEFVKVSCKSCAKNFCFRHRHEDDHKCEVAAAIAT 596
MEF DLG+HCS C Q LDFLPF C+ CN ++C +H + +HDC A+ +K V C CN+ + + + D + RH+ C + K + + + +CS GC+ E + + C C +N+C +HRH DHKCE A + T
Sbjct: 1 MEFPDLGEHCSVSSCKQ--------------LDFLPFKCDACNQIYCKKHYFYTSHDCKEAHSKNKLVPTCPLCNEPVPCKRNETVDFAVSRHIDEECSDDRAKKKRDSVYSNKCSLRGCKQKEAIPIICDCCRRNYCLKHRHPSDHKCENAETVKT 143
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: UPI001F036B4C (AN1-type zinc finger protein 2A-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F036B4C) HSP 1 Score: 119 bits (298), Expect = 1.290e-26 Identity = 59/151 (39.07%), Postives = 78/151 (51.66%), Query Frame = 3
Query: 135 MEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKT--RPNKLRCSAPGCRGSEFVKVSCKSCAKNFCFRHRHEDDHKCEVA 581
MEF LGKHCS C + LDFLP C+ CN FC +H ++ TH+C +A D +V C CNK + + G D+ + H+ CL K + N RCSA GC+ E V ++C SC +N+C RHRH DH C A
Sbjct: 1 MEFPGLGKHCSLASCKR--------------LDFLPMNCDACNKTFCSEHISYNTHNCQSAYKKDVQVPVCPLCNKPIPVKRGEPPDIKVGEHIDRDCLSDPAKENRKLNANRCSAKGCKKRELVPITCPSCRRNYCLRHRHPQDHNCTTA 137
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: A0A2R6WVS9_MARPO (AN1-type domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WVS9_MARPO) HSP 1 Score: 116 bits (290), Expect = 2.050e-26 Identity = 57/152 (37.50%), Postives = 77/152 (50.66%), Query Frame = 3
Query: 123 AGKKMEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKLRCSAPGCRGSEFV--KVSCKSCAKNFCFRHRHEDDHKC 572
+G F LG HC+ E+C+Q LDFLPFTC+ C+ V+CL+HR++ H+C+ N D V+ C C + +K G S VTL++H G + P K RC P CR V SCKSC C +HR+ DH C
Sbjct: 2 SGGTEAFPTLGSHCAEEYCHQ--------------LDFLPFTCDSCSKVYCLEHRSYKAHECSKVNLKDNVVIVCPTCTRTVKKVAGESEAVTLKKHNFDGSCSSAGRPAP-KARCPVPRCREELLVLNTYSCKSCGSTVCLKHRYPTDHAC 138
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: UPI00201EF269 (AN1-type zinc finger protein 2A-like isoform X3 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EF269) HSP 1 Score: 118 bits (296), Expect = 2.590e-26 Identity = 58/149 (38.93%), Postives = 75/149 (50.34%), Query Frame = 3
Query: 135 MEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKL--RCSAPGCRGSEFVKVSCKSCAKNFCFRHRHEDDHKCE 575
MEF LGKHC C Q LDFLP C+ C+ +FC H + TH CT + D +V C CN+ + + G D + RH+ + C + K R +CS GC+ E V V C C +NFCFRHRHE DHKC+
Sbjct: 1 MEFPSLGKHCFESSCKQ--------------LDFLPMKCDACSNIFCRDHIKYDTHSCTESYKKDNQVPVCPLCNEAISVKKGDLPDAVVSRHIDNDCSSDLAKQRRKIYTNKCSFKGCKQKELVPVKCDKCHQNFCFRHRHETDHKCQ 135
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Match: SAP16_ORYSJ (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 n=11 Tax=Oryzinae TaxID=1648021 RepID=SAP16_ORYSJ) HSP 1 Score: 117 bits (293), Expect = 8.620e-26 Identity = 59/147 (40.14%), Postives = 76/147 (51.70%), Query Frame = 3
Query: 138 EFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHRTHATHDCTNANFNDKRVLECSACNKVLKSQPGVSRDVTLQRHMTSGCLEGVRKTRPNKLRCSAPGCRGSEFVK--VSCKSCAKNFCFRHRHEDDHKC 572
EF +LGKHCS CNQ +DFLPFTC+ C+ VFCLQHR++ +H C NAN D VL C C K ++ P ++T H+ S C + K +C PGCR + + CK C K C +HR DHKC
Sbjct: 5 EFPNLGKHCSVGDCNQ--------------IDFLPFTCDRCDHVFCLQHRSYTSHQCPNANQKDVTVLICPLCAKGVRLNPNEDPNITWDTHVNSDCDPSNYQKVTKKKKCPVPGCRETLTFSNTIRCKDCTKEHCLKHRFGPDHKC 137 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4431.11202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4431.11202.1 >prot_H-paniculata_contig4431.11202.1 ID=prot_H-paniculata_contig4431.11202.1|Name=mRNA_H-paniculata_contig4431.11202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp MEFHDLGKHCSAEFCNQQALSLASHFCPSSGLDFLPFTCNGCNLVFCLQHback to top mRNA from alignment at H-paniculata_contig4431:6303..9748+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4431.11202.1 ID=mRNA_H-paniculata_contig4431.11202.1|Name=mRNA_H-paniculata_contig4431.11202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3446bp|location=Sequence derived from alignment at H-paniculata_contig4431:6303..9748+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4431:6303..9748+ >mRNA_H-paniculata_contig4431.11202.1 ID=mRNA_H-paniculata_contig4431.11202.1|Name=mRNA_H-paniculata_contig4431.11202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1344bp|location=Sequence derived from alignment at H-paniculata_contig4431:6303..9748+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |