prot_H-paniculata_contig44301.11200.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44301.11200.1
Unique Nameprot_H-paniculata_contig44301.11200.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: A0A8F0F814_9PHAE (CF0 subunit I n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F814_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.280e-70
Identity = 124/156 (79.49%), Postives = 137/156 (87.82%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTDIFETNVINL LLLVLLFVVIKNFLKDNL ARKKKI EDL+KA SRL D++ R  EA  Q SQV+MII+EI +Q K TK NIV IKW +A+EDLS+RF+IAIGILRSREKKIFNEIIKEISQKA+TRV+LKLKNQLG+ EQ EIVNRKLKQLGD
Sbjct:   19 NTDIFETNVINLGLLLVLLFVVIKNFLKDNLNARKKKIVEDLDKAGSRLTDSAKRYDEAIKQWSQVNMIIREINHQMKKTKLNIVTIKWTQAKEDLSKRFVIAIGILRSREKKIFNEIIKEISQKALTRVVLKLKNQLGDVEQSEIVNRKLKQLGD 174
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: A0A8F0JZE5_9PHAE (CF0 subunit I n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZE5_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 2.820e-60
Identity = 102/156 (65.38%), Postives = 131/156 (83.97%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTDIFETN+IN+ LLLV+LFVVIKNFLK+NLTARKKKI + ++ A +RL D++ R  EA  Q +Q+ +IIKEI +Q +TTKQNI+ +KW++A+EDLS++F  AIG+LR+RE KIFN++IKE+SQKA+ RVILKLK QLG  EQ  IVNRK+KQLGD
Sbjct:   19 NTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 174
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: A0A0R6LZW8_UNDPI (ATP synthase subunit b, chloroplastic n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6LZW8_UNDPI)

HSP 1 Score: 182 bits (463), Expect = 3.580e-56
Identity = 95/156 (60.90%), Postives = 127/156 (81.41%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTDIFETN+IN++LLLV+LFVVIKNFL +NLTARKKKI +D++ A +RL D++ R  EA  Q +Q+ +IIKEI +Q + TKQN++ +KW + +EDLS++F  AI +LR+RE KIFN++IKE+S+KA+ RVI KL+ QLG AEQ  IVNRK+ QLGD
Sbjct:   19 NTDIFETNIINIILLLVILFVVIKNFLTENLTARKKKIVDDIQNAETRLADSNKRYTEAKKQWAQMDIIIKEINHQMEVTKQNVLKLKWEQGKEDLSKKFTTAIAVLRNRENKIFNDVIKEVSKKALNRVIFKLQKQLGKAEQSAIVNRKITQLGD 174
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: D1GJI0_FUCVE (ATP synthase subunit b, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJI0_FUCVE)

HSP 1 Score: 179 bits (453), Expect = 1.180e-54
Identity = 93/156 (59.62%), Postives = 128/156 (82.05%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTDIFETN+INL++LL +LFVVIKNFL +NLT RKKKI  D+E A +RL D++ R  EA  Q SQ+ +I+KEI  Q +TTKQ+++ ++W++A+EDLS++FI+AI ILR+RE KIFN++IKE+S+KA+TRV  K+KNQLG  EQ  I++RK+ Q+GD
Sbjct:   19 NTDIFETNIINLIILLGVLFVVIKNFLTENLTTRKKKIISDIENAETRLADSNKRYVEAQKQWSQMDIILKEINQQMETTKQSVLKLRWDQAKEDLSKKFIVAIEILRNRENKIFNDLIKEVSKKALTRVTRKIKNQLGKIEQSAIIDRKITQIGD 174
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: A0A6B7EYT6_9PHAE (ATP synthase CF0 subunit B n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYT6_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 3.900e-53
Identity = 92/156 (58.97%), Postives = 126/156 (80.77%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTDIFE+N+IN++LLLV+LFVVIK FL +NLTARK KI E +E A +RL D++ R  EA  Q +Q+ +IIKEI  Q +TTKQN++ +KW++ ++DLS++F  AI +LR+RE KIFN++IKE+S+KA+T+V+LKLK QLG AEQ  IVN K+ QLG+
Sbjct:   19 NTDIFESNIINIILLLVILFVVIKKFLTENLTARKNKIVEGIENAETRLADSNKRYSEAKKQWAQMDIIIKEINQQMETTKQNVLKLKWDQGKDDLSKKFTTAILVLRNRENKIFNDVIKEVSKKALTQVVLKLKKQLGKAEQSAIVNLKITQLGE 174
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: A0A1I9LVV0_9PHAE (ATP synthase CF0 B chain subunit I n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVV0_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 2.240e-52
Identity = 89/156 (57.05%), Postives = 124/156 (79.49%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTDIFETN++N+ LLL +LFVVIKNFL +NLT RKKKI ED+E A +RL D++ R  EA  Q SQ+ ++IKEI  Q +TTKQN++ +KWN+ ++DLS++F  AI +LR+RE KIFN+++KE+S+KA+T+VIL LK +LG  EQ  I++ K+ QLG+
Sbjct:   19 NTDIFETNIVNIFLLLAILFVVIKNFLTENLTIRKKKIVEDIENAETRLYDSNKRYSEAKKQWSQIDIVIKEINQQMETTKQNVLKLKWNQGKDDLSKKFTTAIIVLRNRENKIFNDVMKEVSKKALTQVILNLKKRLGKLEQSAIIDLKITQLGE 174
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: A0A8F0JYG4_9PHAE (CF0 subunit I n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYG4_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 3.180e-52
Identity = 88/156 (56.41%), Postives = 124/156 (79.49%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTDIFETN++N+ +LLV+LF+VIKNFL +NLTARKKKI + +E A +RL D++ R  EA  Q +Q+ +II EI +Q + TKQN++ +KW + ++DL+++F +AI +LR+RE KIFN+IIKE+S+KA+ RVI K+K QLG  EQ  I+NRK+ QLGD
Sbjct:   19 NTDIFETNIVNIAILLVILFIVIKNFLTENLTARKKKIVDGIENAETRLADSNKRYTEAKKQWAQMDIIIGEINDQMEKTKQNVLKLKWEQGKDDLAKKFTLAISVLRNRETKIFNDIIKEVSKKALNRVIFKVKKQLGKVEQSAIINRKIMQLGD 174
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: D1J795_ECTSI (ATP synthase subunit b, chloroplastic n=7 Tax=Ectocarpales TaxID=2877 RepID=D1J795_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 6.320e-51
Identity = 89/156 (57.05%), Postives = 123/156 (78.85%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTD+FETN+IN++LLL +LFVVIK FL +NLTARK+KI + +E A +RL D++ R  EA  Q SQ+ +IIKEI  Q +TTKQN++ +KW++ ++DLS++F  AI +LR+RE KIFN++ KE+S+KA+ +VILKLK QLG  EQ  IVN K+ QLG+
Sbjct:   14 NTDLFETNIINIILLLGILFVVIKKFLTENLTARKEKIVQGIENAETRLADSNKRYNEAKKQWSQMDIIIKEITQQMETTKQNVLKLKWDQGKDDLSKKFTTAIVVLRNRENKIFNDVTKEVSKKALNQVILKLKKQLGKVEQSAIVNMKITQLGE 169
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: A0A1L2F1U0_9PHAE (AtpF n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1U0_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 6.400e-50
Identity = 89/156 (57.05%), Postives = 122/156 (78.21%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            N DIFETN+IN++LLL +LFVVIKNFL +NLT+RK+KI E++E A ++L D++ R  EA  Q +Q+ +I+KEI  Q + TK+N++ +KWNK +EDLS++F IAI IL +RE KIF ++IKE+S+KA+ RV  KL NQLG  EQ  I+NRK+ QLGD
Sbjct:   21 NPDIFETNIINIILLLGILFVVIKNFLTENLTSRKEKIIENIENAETQLTDSNNRYIEAQKQWAQMDIIVKEINQQMEITKRNLLKLKWNKTKEDLSKKFTIAIEILHNRENKIFADVIKEVSKKALNRVTSKLVNQLGKVEQSAIINRKIAQLGD 176
[Close]
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Match: A0A8E5XRA6_9PHAE (ATP synthase subunit b, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRA6_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 2.440e-46
Identity = 81/156 (51.92%), Postives = 124/156 (79.49%), Query Frame = 0 
Query:    1 NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLMDASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRFIIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRKLKQLGD 156
            NTDIFETNVIN++LLL++LF+V+ NFLK++L +RKKKI  D+E A  RL++A  R +EA+ Q SQ+ ++I++IY Q + TKQNI+ +K N A++DLS++F  A  ILR RE+K F+++IKE+S++A+ +V++KL+ +LG  EQ+++VN K+K L D
Sbjct:   26 NTDIFETNVINIILLLIVLFLVLSNFLKESLGSRKKKITTDVENAEERLVEAKKRYKEAEKQWSQIQIVIEDIYQQAQQTKQNILKVKCNIAKQDLSKKFGAATTILRYREQKTFDDVIKEVSERALKKVVIKLQKELGEKEQIDLVNSKIKLLED 181
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44301.11200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F814_9PHAE1.280e-7079.49CF0 subunit I n=1 Tax=Protohalopteris sp. TaxID=28... [more]
A0A8F0JZE5_9PHAE2.820e-6065.38CF0 subunit I n=1 Tax=Desmarestia aculeata TaxID=6... [more]
A0A0R6LZW8_UNDPI3.580e-5660.90ATP synthase subunit b, chloroplastic n=25 Tax=Lam... [more]
D1GJI0_FUCVE1.180e-5459.62ATP synthase subunit b, chloroplastic n=3 Tax=Fuca... [more]
A0A6B7EYT6_9PHAE3.900e-5358.97ATP synthase CF0 subunit B n=1 Tax=Cladosiphon oka... [more]
A0A1I9LVV0_9PHAE2.240e-5257.05ATP synthase CF0 B chain subunit I n=1 Tax=Pleuroc... [more]
A0A8F0JYG4_9PHAE3.180e-5256.41CF0 subunit I n=1 Tax=Chorda asiatica TaxID=128157... [more]
D1J795_ECTSI6.320e-5157.05ATP synthase subunit b, chloroplastic n=7 Tax=Ecto... [more]
A0A1L2F1U0_9PHAE6.400e-5057.05AtpF n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2... [more]
A0A8E5XRA6_9PHAE2.440e-4651.92ATP synthase subunit b, chloroplastic n=1 Tax=Ishi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..62
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
NoneNo IPR availablePANTHERPTHR34264:SF3ATP SYNTHASE SUBUNIT B, CHLOROPLASTICcoord: 1..155
NoneNo IPR availablePANTHERPTHR34264FAMILY NOT NAMEDcoord: 1..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 10..27
IPR002146ATP synthase, F0 complex, subunit b/b', bacterial/chloroplastPFAMPF00430ATP-synt_Bcoord: 4..129
e-value: 1.3E-9
score: 38.2
IPR002146ATP synthase, F0 complex, subunit b/b', bacterial/chloroplastHAMAPMF_01398ATP_synth_b_bprimecoord: 1..136
score: 9.461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44301contigH-paniculata_contig44301:235..705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44301.11200.1mRNA_H-paniculata_contig44301.11200.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44301 235..705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44301.11200.1 ID=prot_H-paniculata_contig44301.11200.1|Name=mRNA_H-paniculata_contig44301.11200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
NTDIFETNVINLVLLLVLLFVVIKNFLKDNLTARKKKIAEDLEKANSRLM
DASIRCQEADAQLSQVSMIIKEIYNQTKTTKQNIVNIKWNKAQEDLSQRF
IIAIGILRSREKKIFNEIIKEISQKAVTRVILKLKNQLGNAEQLEIVNRK
LKQLGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002146ATP_synth_b/b'su_bac/chlpt