mRNA_H-paniculata_contig4430.11198.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4430.11198.1
Unique NamemRNA_H-paniculata_contig4430.11198.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: D7G8J4_ECTSI (Calcineurin-like phosphoesterase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J4_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 2.400e-111
Identity = 167/246 (67.89%), Postives = 197/246 (80.08%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLLPELEEMVGGDWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHLRG-----AGG------VAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVGDEITVLTEYKSIPADGRACRPLPPASEMETLRRQ 705
            ++NA GDHSMATRKAF PF  L PEL+E+VGGDWS +EGFP W+RCRL AMRPGG VARLM+AHAV MKVGDNLFVHAGL P+H+RG     AGG      VA AEEVME +NA   AW+LG  +++P  ++  + P+WTRVYS+PDSR++D AARA+LEEVLRLTGTKRM+VGHTPQR GINSAA+GQ+WRVDTGMTAMIGGRPE LEI G+E+T+LTEYKSIP   RA R   P S+ +  RRQ
Sbjct:  154 MLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGK-RSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEALEIRGEEMTILTEYKSIPGQKRAARQPTPVSKGDEFRRQ 398          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: A0A835Z3D9_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3D9_9STRA)

HSP 1 Score: 244 bits (623), Expect = 3.000e-77
Identity = 123/223 (55.16%), Postives = 156/223 (69.96%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLLPELEEMVGG-DWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHLRGAGGVAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVGDEITVLTEYKSIPADGRACRP 666
             +NA GDH+MA R AF PFDDL PELE ++G   W  +   P WSRCR+ AM PGG V  +++ H V +KVGD+L VHAG+ P+HL   GG       +E +N     WL  +G  +P+ L  E SPVWTR+YSSPDS D+   A  +L+EVL+ TGTKRM+VGHTPQR+GINSAA+G++WRVDT M A++GG+PEVLEI GDEI VLTEY  +PA+ R   P
Sbjct:   66 ALNACGDHTMAARTAFQPFDDLKPELEALLGDRGWGGLMQMPEWSRCRIAAMYPGGPVGAMLANHGVTLKVGDSLIVHAGVLPRHLELPGG-------LEGLNQRTWEWLTNAGP-LPDELLQEASPVWTRLYSSPDSVDLHVRAVQQLDEVLQRTGTKRMIVGHTPQRIGINSAADGKVWRVDTAMCAIMGGKPEVLEICGDEIAVLTEYGRVPAEERRAWP 280          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: D7FZT9_ECTSI (Calcineurin-like phosphoesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT9_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 4.320e-66
Identity = 118/233 (50.64%), Postives = 153/233 (65.67%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLLPELEEMVGGDWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHL-----RGAGGVAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVGDEITVLTEY-KSIPADGRAC---RPLP 672
            +MNA GDHS A+  +F PF DL  +L        SQ++ FP W + RL AM PGG V++++++H+V MK+GD L VH GLRP +      RGA G+A     +E++N     WL+G G+ MP  L+  DSPVWTR YSSP   ++ E A A+L++VL  TGT RM+VGHTPQ  GINSA  G++WR DTGMTAMIGG+PE LEIV    T++T   K IP D RAC   +PLP
Sbjct:   88 IMNAMGDHSTASPNSFKPFQDLDVDLAPF----GSQLDKFPDWGKPRLAAMAPGGPVSKMLASHSVAMKIGDTLLVHGGLRPVNFDPKSCRGATGMA----CLESLNRWTHEWLVGQGE-MPKELWNRDSPVWTRFYSSPGGVELSEEAEADLQKVLDATGTVRMIVGHTPQEAGINSALGGRLWRTDTGMTAMIGGQPEALEIVDGVATIITAGGKRIPGDERACTAGKPLP 311          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: A0A6H5KL57_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL57_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 5.570e-59
Identity = 103/200 (51.50%), Postives = 136/200 (68.00%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLLPELEEMVGGDWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHL-----RGAGGVAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPE 585
            +MNA GDHS A+ K+F PF DL  +L        SQ++ FP W + RL AM PGG V++++++H+V MK+GD L VH GLRP +      RGA G+A     +E++N     WL+G G+ MP  L+  DSPVWTR YSSP   ++ E A A+L++VL +TGT RM+VGHTPQ  GINSA  G++WR DTGMTAMIGG+PE
Sbjct:  183 IMNAMGDHSTASPKSFEPFQDLNVDLAPF----GSQLDKFPDWGKPRLAAMAPGGPVSKMLASHSVAMKIGDTLLVHGGLRPVNFDPKSCRGATGMA----CLESLNRWTHEWLIGQGE-MPKELWNRDSPVWTRFYSSPGGVELGEEAGADLQKVLDVTGTVRMIVGHTPQEAGINSALGGRLWRTDTGMTAMIGGQPE 373          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: A0A835Z833_9STRA (Calcineurin-like phosphoesterase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z833_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.660e-57
Identity = 106/223 (47.53%), Postives = 147/223 (65.92%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLLPELEEMVGGDWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHL--RGAGGVAEAEEV-MENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEI-VGDEITVLTEYKSIPADGRA 657
            +MN  GDHS A++++FAPF +L P +E  +  + + +E  P W+  RL AMR  G VA +M+ H+V MK+G+ L VHAG+  +HL  +  GGV       +E +N+ AA +LL  G     +L+G +SPVWTR YS PD + + + A  EL  VL  TG+ RM+VGHTPQ  GINSAA G++WRVDTGMT  IGG+PEVLEI  G EI++LT+   + A+ R+
Sbjct:  130 LMNIMGDHSSASKESFAPFVELSPLVETWMNENTALLEKVPKWAWPRLAAMRASGPVAHMMAGHSVAMKIGNTLVVHAGILREHLEPQRCGGVTNGGVACLELLNSVAANYLLNGGGMPQEMLWGRESPVWTRRYSMPDGKALAKDAEEELIAVLEATGSIRMVVGHTPQSAGINSAAQGKVWRVDTGMTKAIGGKPEVLEIRKGGEISILTKAGRVSAEQRS 352          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: A0A7S0ZFK9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFK9_9RHOD)

HSP 1 Score: 157 bits (397), Expect = 1.330e-43
Identity = 86/173 (49.71%), Postives = 108/173 (62.43%), Query Frame = 1
Query:  109 VEGFPAWSRCRLLAMRPGGSVARLMSAHA-VCMKVGDNLFVHAGLRPQHLRGAGGVAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVGDEITVLT 624
            V   PAW R R LAMRPGG V+ +++  A V + VGDN+FVH GLRP H      + + +  +E MN+   AWL G G+  P V+ G  SPVW R YS P    VD    A LE  LR+   KRM+VGHTPQ  GIN+A +G+IWR+DTGM+A  GG PE LEI  + I +LT
Sbjct:  108 VRNMPAWMRARALAMRPGGRVSGILAQRATVAIIVGDNIFVHGGLRPDH------IPDGDASLEAMNSATRAWLAGKGEK-PAVMKGGRSPVWMRNYSRPIPTPVD---CAMLERTLRVVRAKRMIVGHTPQAAGINAACSGKIWRIDTGMSAAYGGVPEALEITPNRIRILT 270          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: A0A846P6L0_9BACT (Calcineurin n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A846P6L0_9BACT)

HSP 1 Score: 142 bits (357), Expect = 2.130e-37
Identity = 85/209 (40.67%), Postives = 112/209 (53.59%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLLPELEEMVGGDWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHLRGAGGVAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVGDEITVLTE 627
            +MN A D    T   F  F D +      V G  S + G+  W R R+ A RPGG  A++++     + +G N+FVH G+ P+H+         +  +E +NA    WL G G   P  +   DSPVWTR YS     DVDE+    L EVL   G KRM+VGHT    GI S  +G++W +D GM+A  GG P+VLEI GD I VLTE
Sbjct:  116 LMNVALDLRYVTPGGFEDFQDAVT-----VTGIDSVLAGYEEWQRARVAAFRPGGIYAKVLARRNTVVIIGQNVFVHGGVLPEHV---------DYGLERLNAEVRVWLAGDGPC-PEWILKRDSPVWTRRYSL----DVDESDCEMLAEVLIELGAKRMIVGHTDHVKGIASYCHGKVWCIDAGMSAHYGGEPQVLEIKGDTIRVLTE 305          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: A0A5J4Z723_PORPP (Shewanella-like protein phosphatase 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z723_PORPP)

HSP 1 Score: 143 bits (361), Expect = 3.340e-37
Identity = 87/215 (40.47%), Postives = 116/215 (53.95%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLL------PELEEMVGGDWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHA-VCMKVGDNLFVHAGLRPQHLRGAGGVAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVGDEITVLT 624
            +MN   D    T+  FA F   +      P+L ++       ++  P W R R LA RPGG+ A LM+    V + VGDNLFVH GL+P+H      V E  + +E MN     +LLG     P  L G  SPVW R +S P     D    + L   L+LT T+RM+VGHTPQ  G+N A +G++WRVDTGM++  GG PE LEI    + +LT
Sbjct:  175 LMNVEHDFRYVTQGGFAEFAREVEKTGREPDLSKVPTPVIESIKAMPQWMRPRALAFRPGGTEATLMANRMQVAVVVGDNLFVHGGLKPEH------VTE-PDALETMNKNTRQFLLGKADK-PTALRGGKSPVWMRNFSRPVPETSD---CSMLTRTLQLTNTRRMIVGHTPQAAGVNGACSGRVWRVDTGMSSAYGGIPEALEITPKRVRILT 378          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: A0A661A621_9BACT (Calcineurin n=1 Tax=bacterium TaxID=1869227 RepID=A0A661A621_9BACT)

HSP 1 Score: 140 bits (352), Expect = 1.020e-36
Identity = 80/209 (38.28%), Postives = 115/209 (55.02%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLLPELEEMVGGDWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHLRGAGGVAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVGDEITVLTE 627
            +MNA GD    T   F  F+D + +         S +  +P   R R  A  PG   A L++   V +++GDN+FVH G+ PQH+         +  ++ +NAG  AW+ G  +  P +L G DSP WTR+YS     + D +A A L  VL+  G KR+++GH+ Q LGI+ A +   WR+D G+ A  GG  +VLEI+GDEI VL E
Sbjct:  111 IMNAKGDFRYVTEGGFKDFEDAVHQDSAD-----SSLARYPQLERARRAAFLPGRPYALLLAERIVILQLGDNVFVHGGVLPQHV---------DYGIDRINAGTQAWMRGEAER-PEILEGSDSPQWTRLYSD----EPDSSACAVLGGVLKQLGAKRIIMGHSVQELGIDPACDSLAWRIDVGLAAHYGGDMQVLEIIGDEIRVLKE 300          
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Match: A0A7S3A6N2_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A6N2_9RHOD)

HSP 1 Score: 139 bits (351), Expect = 8.160e-36
Identity = 80/212 (37.74%), Postives = 114/212 (53.77%), Query Frame = 1
Query:    1 VMNAAGDHSMATRKAFAPFDDLLPELEEMVG----GDWSQVEGFPAWSRCRLLAMRPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHLRGAGGVAEAEEVMENMNAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEVLRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVGDEITVLT 624
            +MN + D    T   F  F+ L  +  E +G         ++G P + R R  ++RPGG  +  +S + + + +GDN+FVH GLRP HL   G        +E MN+   AW+ G  +   ++  G+ SPVW R YS    +   +     L+  L L   KRM+VGHTPQ+ GIN+A  G++WR+DTGM+A  GG PE LEI    I VLT
Sbjct:  167 IMNVSLDFRYVTPGGFVDFEPLADQANEKLGKLPPAISETIKGLPEFMRSRAWSLRPGGPFSNRISTNQLAIVIGDNVFVHGGLRPTHLAEPG-------ALETMNSACRAWMQGRAEKPSSLKTGK-SPVWMRNYSLGSPKIGSDECNT-LQASLDLIPAKRMIVGHTPQQQGINAACAGKVWRIDTGMSAAYGGPPEALEITKRRIRVLT 369          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4430.11198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8J4_ECTSI2.400e-11167.89Calcineurin-like phosphoesterase family protein n=... [more]
A0A835Z3D9_9STRA3.000e-7755.16Metallo-dependent phosphatase-like protein n=1 Tax... [more]
D7FZT9_ECTSI4.320e-6650.64Calcineurin-like phosphoesterase n=1 Tax=Ectocarpu... [more]
A0A6H5KL57_9PHAE5.570e-5951.50Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A835Z833_9STRA1.660e-5747.53Calcineurin-like phosphoesterase family protein n=... [more]
A0A7S0ZFK9_9RHOD1.330e-4349.71Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A846P6L0_9BACT2.130e-3740.67Calcineurin n=1 Tax=Candidatus Latescibacteria bac... [more]
A0A5J4Z723_PORPP3.340e-3740.47Shewanella-like protein phosphatase 2 n=1 Tax=Porp... [more]
A0A661A621_9BACT1.020e-3638.28Calcineurin n=1 Tax=bacterium TaxID=1869227 RepID=... [more]
A0A7S3A6N2_9RHOD8.160e-3637.74Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4430contigH-paniculata_contig4430:13406..15727 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score334.7
Seed ortholog evalue3.4e-89
Seed eggNOG ortholog2880.D7G8J4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG0639@1,KOG0374@2759
Ec32 ortholog descriptionMetallo-dependent phosphatase-like
Ec32 orthologEc-14_003230.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size708
Cds size705
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4430.11198.1prot_H-paniculata_contig4430.11198.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4430 13406..15724 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930335.9785705-CDS-H-paniculata_contig4430:13405..135281622930335.9785705-CDS-H-paniculata_contig4430:13405..13528Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4430 13406..13528 -
1691481246.9279046-CDS-H-paniculata_contig4430:13405..135281691481246.9279046-CDS-H-paniculata_contig4430:13405..13528Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4430 13406..13528 -
1622930335.9978397-CDS-H-paniculata_contig4430:14091..142261622930335.9978397-CDS-H-paniculata_contig4430:14091..14226Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4430 14092..14226 -
1691481246.9481583-CDS-H-paniculata_contig4430:14091..142261691481246.9481583-CDS-H-paniculata_contig4430:14091..14226Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4430 14092..14226 -
1622930336.012865-CDS-H-paniculata_contig4430:14790..150331622930336.012865-CDS-H-paniculata_contig4430:14790..15033Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4430 14791..15033 -
1691481246.9631557-CDS-H-paniculata_contig4430:14790..150331691481246.9631557-CDS-H-paniculata_contig4430:14790..15033Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4430 14791..15033 -
1622930336.033288-CDS-H-paniculata_contig4430:15520..157241622930336.033288-CDS-H-paniculata_contig4430:15520..15724Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4430 15521..15724 -
1691481246.9800184-CDS-H-paniculata_contig4430:15520..157241691481246.9800184-CDS-H-paniculata_contig4430:15520..15724Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4430 15521..15724 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930336.0527518-UTR-H-paniculata_contig4430:15724..157271622930336.0527518-UTR-H-paniculata_contig4430:15724..15727Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4430 15725..15727 -
1691481246.9973238-UTR-H-paniculata_contig4430:15724..157271691481246.9973238-UTR-H-paniculata_contig4430:15724..15727Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4430 15725..15727 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4430.11198.1

>prot_H-paniculata_contig4430.11198.1 ID=prot_H-paniculata_contig4430.11198.1|Name=mRNA_H-paniculata_contig4430.11198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp
MNAAGDHSMATRKAFAPFDDLLPELEEMVGGDWSQVEGFPAWSRCRLLAM
RPGGSVARLMSAHAVCMKVGDNLFVHAGLRPQHLRGAGGVAEAEEVMENM
NAGAAAWLLGSGKAMPNVLFGEDSPVWTRVYSSPDSRDVDEAARAELEEV
LRLTGTKRMLVGHTPQRLGINSAANGQIWRVDTGMTAMIGGRPEVLEIVG
DEITVLTEYKSIPADGRACRPLPPASEMETLRRQ*
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mRNA from alignment at H-paniculata_contig4430:13406..15727-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4430.11198.1 ID=mRNA_H-paniculata_contig4430.11198.1|Name=mRNA_H-paniculata_contig4430.11198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2322bp|location=Sequence derived from alignment at H-paniculata_contig4430:13406..15727- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGATGAACGCAGCGGGGGACCACTCTATGGCCACTCGGAAGGCGTTTGC TCCCTTCGACGACCTGCTGCCGGAGCTGGAGGAGATGGTGGGAGGCGACT GGAGCCAGGTGGAGGGTTTCCCTGCCTGGTCTCGGTGTAGGCTGCTGGCA ATGCGACCGGGTGGGTCTGTGGCAAGATTGATGTCTGCGCACGCTGTATG TATGAAGGTGCGTTGTATTTTTGTCTGGTCACCCCGAGTTAGAAGGGGCG GGGGGGGGGGGGGGCTCCTTGTCTGGGCTCGAAATGACTGCGCTGCATGC TGAGCCAACTCATGTAGGGTGAGTGTACATGTATATGGCGGTGTGGTCAG TGATTGTTCCGTGTGCTCTTGTCGACCAGTAGTTCGAAGAGAAGATCAAA AACGGATTGAACAAAGATCCTCTCTTCCCTCCGCCCCATTAAATTTGTTC AGTTTGTGAATAATAACCGTCCTCCTGGTGACCCCCCTCCCCCCCGTACA CACACACACAAATCACCGTGTAATCCTTTTTTTTTTTAACTCCTGGGGTA CCTTCCGATCCCAGAGTTGTGAACGACCCTTGATATATCTAGTCCCACTT TATTATCTATGGCGCCTCGAGTGTACACTCGGACATTAAGGTGACGTGCT CATCTCCATTTGGATGCTGCCGGCCGCTTTTGAATATCGTACAGGTGGGT GACAATTTGTTCGTGCACGCGGGACTGAGGCCGCAACACTTGCGAGGGGC GGGCGGCGTTGCTGAAGCGGAGGAAGTGATGGAGAACATGAACGCCGGGG CGGCGGCGTGGTTGCTGGGTAGCGGCAAGGCAATGCCCAACGTTTTATTT GGAGAGGATAGCCCAGTGTGGACGAGGGTGTACTCGAGTCCGGACTCGCG CGACGTGGACGAGGCAGCTAGGGCAGAGCTTGAAGAGGTGACCTGGAACG AGATGGGGAGGGGAGGGGGTATGATCATATATTCATATGTGGCCAAACTG ATGATGCAGGGTTACGGCTTAACCCTTTTGGAGCCGGATCTTCACGTCCA AAACGTAGATTTGCTATCAATCGGTCGTACATAATGACCAATACGTCGAT AGCATGTCGAACCAGGTCCAGGCAGCTGGCTAGTGCAATTCGTGTGCAAA AACGGGGTCATGTTTTTGGCGTTTGGAACTTTTTATCTTCAATGTAGTAT AGAGAACGTGCAAGCACGCCCTTTTACGCAACCACCAAATTTTGAACACT CTACAAATGATTGGAAGATCAGAAGTTCCTTATGGGTTCAGCGCTTGGCT TCACGTGTTGCTGCCGGAATTCCAGCTCTTGTTATTGGTCAGAATGCCCC CCCCCCCCGACTTCATTCTAAAACTTACCATCCCCAGAAGACGTTTTCAT ACCAAACCCCCAGTATGGCCATGGGGATGTTCAATTTTTTACTACTCGTT TAACCCTATGGTCCGCCGTTCTCTCTTTGCTTTGCGTTCGGAAAAGCACA GGTGCTGCGATTGACGGGCACGAAGCGAATGTTGGTGGGGCACACCCCTC AGCGATTAGGTATTAACTCGGCCGCCAACGGGCAAATTTGGCGCGTAGAC ACGGGCATGACGGCTATGATAGGAGGGCGGCCCGAGGTGAGGCGGTTGTT GATGACCGTTTGCTTGGACGTTCTGATTCAAGTATCAAAGGATGGGCAGC CTTGGTAGGACGGGCGGATGGAGAGTACCTCGTTGGGTGAACAGTAATAT CTGTGGGTGTTGAATTAGCGGCCCGCTTGATGATATGAGTATGTTGATGT CATGGATATTCGTCTGATTAGAACTGTTGTCCCATCGTTCGTCCTGACTC TTTTTTTTTTCTTGCGGTTAATCTTGACTCTTCCCCCCTTTCGCGCGTGC ACCCCCTACCTTAGGTTTTGAAATTATTTAGTGGTGTCTTTGGCGCTTTT AAATTAAGCTAAACACGCACCAATAGGCGGTTTTAAGAGATCTTCATGAC GCCTCTTCCCCACCCTAGTCCTGCCCCCTCATGGTCTCGAGGAGGCGTGG TCAATGATCTACTGTAGCAAAAAACGGCATGCAAAACATAAGTACTCCTT TTCCCCCCCCTCTCGCCCCCTTCCTCTGCAATGCGCGTACCGGCTTGTAT CGATCTTGTGTGCGTTTTTCGTTCCCCCACCCCGGTGTTGACAACCAAGG TACTCGAGATTGTGGGAGATGAAATTACAGTTTTAACGGAGTATAAGAGC ATTCCTGCTGATGGGCGAGCGTGTCGACCATTGCCTCCTGCTTCTGAGAT GGAAACCTTGCGGCGGCAGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig4430:13406..15727-

>mRNA_H-paniculata_contig4430.11198.1 ID=mRNA_H-paniculata_contig4430.11198.1|Name=mRNA_H-paniculata_contig4430.11198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at H-paniculata_contig4430:13406..15727- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACGCAGCGGGGGACCACTCTATGGCCACTCGGAAGGCGTTTGCTCC
CTTCGACGACCTGCTGCCGGAGCTGGAGGAGATGGTGGGAGGCGACTGGA
GCCAGGTGGAGGGTTTCCCTGCCTGGTCTCGGTGTAGGCTGCTGGCAATG
CGACCGGGTGGGTCTGTGGCAAGATTGATGTCTGCGCACGCTGTATGTAT
GAAGATGAACGCAGCGGGGGACCACTCTATGGCCACTCGGAAGGCGTTTG
CTCCCTTCGACGACCTGCTGCCGGAGCTGGAGGAGATGGTGGGAGGCGAC
TGGAGCCAGGTGGAGGGTTTCCCTGCCTGGTCTCGGTGTAGGCTGCTGGC
AATGCGACCGGGTGGGTCTGTGGCAAGATTGATGTCTGCGCACGCTGTAT
GTATGAAGGTGGGTGACAATTTGTTCGTGCACGCGGGACTGAGGCCGCAA
CACTTGCGAGGGGCGGGCGGCGTTGCTGAAGCGGAGGAAGTGATGGAGAA
CATGAACGCCGGGGCGGCGGCGTGGTTGCTGGGTAGCGGCAAGGCAATGC
CCAACGTTTTATTTGGAGAGGATAGCCCAGTGTGGACGAGGGTGTACTCG
AGTCCGGACTCGCGCGACGTGGACGAGGCAGCTAGGGCAGAGCTTGAAGA
GGTGGGTGACAATTTGTTCGTGCACGCGGGACTGAGGCCGCAACACTTGC
GAGGGGCGGGCGGCGTTGCTGAAGCGGAGGAAGTGATGGAGAACATGAAC
GCCGGGGCGGCGGCGTGGTTGCTGGGTAGCGGCAAGGCAATGCCCAACGT
TTTATTTGGAGAGGATAGCCCAGTGTGGACGAGGGTGTACTCGAGTCCGG
ACTCGCGCGACGTGGACGAGGCAGCTAGGGCAGAGCTTGAAGAGGTGCTG
CGATTGACGGGCACGAAGCGAATGTTGGTGGGGCACACCCCTCAGCGATT
AGGTATTAACTCGGCCGCCAACGGGCAAATTTGGCGCGTAGACACGGGCA
TGACGGCTATGATAGGAGGGCGGCCCGAGGTGCTGCGATTGACGGGCACG
AAGCGAATGTTGGTGGGGCACACCCCTCAGCGATTAGGTATTAACTCGGC
CGCCAACGGGCAAATTTGGCGCGTAGACACGGGCATGACGGCTATGATAG
GAGGGCGGCCCGAGGTACTCGAGATTGTGGGAGATGAAATTACAGTTTTA
ACGGAGTATAAGAGCATTCCTGCTGATGGGCGAGCGTGTCGACCATTGCC
TCCTGCTTCTGAGATGGAAACCTTGCGGCGGCAGTAAGTACTCGAGATTG
TGGGAGATGAAATTACAGTTTTAACGGAGTATAAGAGCATTCCTGCTGAT
GGGCGAGCGTGTCGACCATTGCCTCCTGCTTCTGAGATGGAAACCTTGCG
GCGGCAGTAA
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