mRNA_H-paniculata_contig443.11195.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig443.11195.1
Unique NamemRNA_H-paniculata_contig443.11195.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A6H5JL45_9PHAE (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL45_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 1.700e-114
Identity = 212/398 (53.27%), Postives = 258/398 (64.82%), Query Frame = 1 
Query:    1 EEEARRKQAHLNFTASHQARHAARQGIVGYVSERRGDFGHFIHSFRRAANHAITHHKFVVSLSIDISEELATLVPAHPQ----AAAGSEISGARHA---------QVGSAASSVEDVGAA------FDGLIDRVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRS------RRTGPGSAHV-ARINPFDKNAVKEARPPAQEKDGGMLGLSGIAGRNIEVSSEDADKDKDFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSE--VMNGWEDVKDFKWHRAQKSPNWSSIPETDREKDHLIIS 1110
            +EE RRKQAHLNF+ASHQAR AARQ      S   G  G+   +       A+ +  F      DI+  L  LV    Q     AAG+ ++GARHA         +  S ASS   V          D L+DRVK LR+RTAEATLFL+ Y++RRA EE G L  SVE+ RAE+APRK+FAFRS      R T  G   + AR     +  V E     QE +GG  GL G+ GR +E+ +EDADKDKDFN++DL +C V ILHVLGALRLR LTS RV+CGPVRGPIYVE C++CV+VAAGRQLRIH+S  +DFYVLVASGPIIEDCS LRFAP+GL YP ++  L+A+    GL E  V N W DVKDFKWHRAQ+SPNW+ IPE++RE D L ++
Sbjct:   18 QEELRRKQAHLNFSASHQARQAARQQAS--TSSGEGGVGNDDEARHNEEIAALFNETFAADTQ-DITNTLDRLVAESKQRPSQTAAGTGLAGARHAHGEAKAPPGKGNSDASSAPAVDGGSGVREELDALVDRVKGLRKRTAEATLFLTVYELRRAQEEVGRLWASVESTRAELAPRKRFAFRSKAKAKGRDTRRGGGGIPAREEGLARKGVDETGDGEQEGEGGP-GLRGVKGREVEILAEDADKDKDFNVADLDSCKVTILHVLGALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFAPAGLRYPEYQQHLQAA----GLDEDAVTNTWGDVKDFKWHRAQQSPNWAVIPESERESDSLAMA 407
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A7S2T903_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2T903_9CHLO)

HSP 1 Score: 164 bits (416), Expect = 8.470e-44
Identity = 99/271 (36.53%), Postives = 142/271 (52.40%), Query Frame = 1 
Query:  322 FDGLIDRVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRT-----GPGSAHVARINPFDKNAVKEARPPAQEKDGGMLGLSGIAGRNIE--------VSSEDADKDKDFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQKSPNWSSIPETDREKD 1095
            F+ L  RV  + ++ A A+ FLSAYDVR   +    L   ++  + E+ PRK F FR RR          A  AR     K++V+E    A  ++          G  +E        ++ EDA  D D  I+   +C + +L  +  LRL  LTS RV CGPV G +Y+E C+D VV+AA  Q RIH + R+DFY+   S PIIE CS +RFAP    +   +  LE  +L    SE  + W DVKDF W ++ +SPNW+ +P+  R ++
Sbjct:   94 FENLRLRVLEMEKKAASASYFLSAYDVRATSDLAKDLKAKIDGVQREVLPRKAFTFRRRRVMRERNAADGAQAARTKA--KSSVQEGGAGAAGENASAQVAVEARGMKVEAREGGVVVIAQEDATSD-DIEIAGCKDCVIYVLAKMAVLRLVDLTSCRVFCGPVGGSLYLEGCRDSVVMAAAHQARIHHAHRVDFYLRTRSYPIIEKCSEVRFAPYAFSFEGRDAALEREKL----SEENDLWSDVKDFGWLKSTQSPNWTVLPQDQRVEE 357
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: UPI001EB0161A (tubulin-specific chaperone C-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB0161A)

HSP 1 Score: 158 bits (399), Expect = 1.470e-41
Identity = 92/258 (35.66%), Postives = 139/258 (53.88%), Query Frame = 1 
Query:  322 FDGLIDRVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKNAVKEARPPAQEKDGGMLGLSGIAGRNIEVSSEDADKDKDFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQK-SPNWSSIPETDREK 1092
            FD +  ++ +L++  +E+T+FLS+Y+V +A +    L  S++  R  + P+KKFAF+S++T    A    ++             A+ K        G   + +E +SE+  + KD  ++DLT+CTVK+L    A+ +  L + RV  GPV G +++  C  C  V   +QLRIH +   DFY+ V S  IIED +  RFAP    YP    +LE   L++GL    N W+DV DF W  A   SPNWS I E DR +
Sbjct:   87 FDSVSSQLSKLQKYVSESTMFLSSYEVTKAQQTMSQLHASIQEKRDVMIPKKKFAFKSKKTEKAKAPKIVVDHAANTQTNLEVELAECK------FVGDVSKVLEKTSEELTQ-KDVALADLTDCTVKLLGAPSAIHINKLRNCRVFSGPVSGSVFIRECVGCTFVLPCQQLRIHTTRDTDFYIHVTSKAIIEDSNKTRFAPYNWKYP----ELEEHYLVAGLDRTRNNWDDVDDFNWLAANDHSPNWSVIAEADRHQ 333
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A1V9ZJD4_9STRA (Tubulin-specific chaperone C n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJD4_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.110e-39
Identity = 92/255 (36.08%), Postives = 136/255 (53.33%), Query Frame = 1 
Query:  322 FDGLIDRVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKNAVKEARPPAQEKDGGMLGLSGIAGRNIEVSSEDADKDKDFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQKSPNWSSIPETDR 1086
             D ++  V+ +R   A+A+L+L  YD+R++      LL  ++  R+ +APRKKFAF++R     +A V   +P     +     P+   D  ++    IA +  E+   DA    D  ++ LTNC V I+    A+R   LTS  V+ GP+ G +++E C +     A RQLR+H   R  FY+ + S PIIEDCSAL F P  L YPA   QL  +++ +           V DFKWHRAQ+SPNW  + E+ R
Sbjct:  156 LDAIVTCVQAMRDAAADASLYLPPYDIRQSQAIVARLLAEIDAQRSALAPRKKFAFKARVKRAAAASVPATSPQPVADI-----PSAPVDHELV----IADKRDELVVIDAVDTPDLTLARLTNCVVCIVAPTAAVRATALTSCHVLTGPILGSLWLEECIESSFTVACRQLRVHHCHRSTFYLRIKSHPIIEDCSALGFGPYALAYPALATQLADADMAAPSPLFAQ----VHDFKWHRAQQSPNWYVLSESAR 397
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A7S1CQH9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQH9_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.270e-39
Identity = 102/273 (37.36%), Postives = 136/273 (49.82%), Query Frame = 1 
Query:  310 VGAAFDGLIDRVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKN---------AVKE----ARPPAQEKDGGMLGLSGIAGRNIEVSSEDADKDK-DFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQKSPNWSSIPETDR 1086
            V AA +     V  L++R A+ATLFL AYDVR+AH     L   V   R  + PRK+F F+SR                           A KE    A+  A+EK          AG  + + + +   D  DF ++ LT+C V I   + ALR+  L    V  G V G + ++AC DCV V + RQ+RIH S+R D+Y+ V S PIIE  SALRFAP GL Y   + Q   + L +  +  +  W  V DF WHR+Q SPNWS I   +R
Sbjct:   80 VTAAVERWTREVGELQRRVADATLFLPAYDVRQAHAAVAELKEQVSATRERLQPRKRFTFKSRXXXXXXXXXXXXXXXXXXXXXXXXXXAAGKEEDSCAKYDAEEKS-----FEDRAGAELVLRAGELGADGGDFKLARLTDCVVVIRETVHALRIDHLERCHVYAGAVSGSVLLDACTDCVFVLSSRQIRIHSSQRCDYYLHVLSHPIIEHSSALRFAPCGLRYDGIDAQRARAGLAAERAATL--WAAVDDFGWHRSQASPNWSVIAPAER 345
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A6P7XD79_9AMPH (tubulin-specific chaperone C n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7XD79_9AMPH)

HSP 1 Score: 149 bits (375), Expect = 2.750e-38
Identity = 88/250 (35.20%), Postives = 131/250 (52.40%), Query Frame = 1 
Query:  340 RVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKNAVKEARPPAQEKDGGMLGLSGIAGRNIEVSSEDADKDKDFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWH-RAQKSPNWSSIPETDR 1086
            R+++LR+  +++  FL +YD+R+A E    L  ++  +R  + P+KKFAF+ R+    +      +        EA P          GL G+    +   + + +K +D  +SDL NCTVK+L    AL +R +  SRV+CGPV   + V+ C  CV+    +QLR HD+     YV V S  I+EDCS ++FAP    Y   +   E    +SGL    N W +V DF W  R  +SPNWS IPE +R
Sbjct:   73 RLQQLRKFLSDSVRFLPSYDLRQAQETLHKLQGALNDSRDRLKPKKKFAFKCRKKEASAPPSXXXSAGPAAVAPEAAPVPS-------GLIGLECETLVKGAAEVEK-RDVLLSDLRNCTVKLLGSPSALHVRHVRDSRVLCGPVATSVLVDGCSGCVLAFPCQQLRAHDTRDTKVYVQVTSRAIVEDCSGIQFAPFSWSYEGMDRDFE----ISGLDRSRNNWREVDDFNWLVRDVQSPNWSIIPERER 310
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A8J5GN15_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GN15_ZINOF)

HSP 1 Score: 150 bits (378), Expect = 3.070e-38
Identity = 91/246 (36.99%), Postives = 135/246 (54.88%), Query Frame = 1 
Query:  352 LRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKNAVKEARPPAQEKDG-GMLGLSG-IAGRNIEVSSEDADKDKDFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQKSPNWSSIPETD 1083
            L +  AE + FL  Y+VR + +   +L  +++ A +E+ PRKKF+FR++ +      + +    +K    + R  A  +D  G     G I  ++  VS E+   + DF +S L  C + +   L AL +  LT+ RV  GPV G I +E   DC+++ A  Q+RIH +   DFY+ V S PIIEDCSA+RFAP  L+Y   + +L       GL E    W +V DFKW RA +SPNWS IP+ +
Sbjct:  109 LDRLVAENSYFLPTYEVRSSLKAISVLKEALDAANSELLPRKKFSFRNKTSKKDPICLVKEIEEEKGPSSDKRVLAAVRDSPGFRNKEGSILIKHFRVSEEE---EGDFTLSGLNCCEIYLKGRLRALFIHRLTNCRVYAGPVLGSILIEEVNDCLLMLASHQIRIHHATATDFYLQVRSRPIIEDCSAVRFAPYRLFYEGIDTELRDC----GLGEETRNWANVDDFKWLRAVQSPNWSLIPDEE 347
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A8J5HEU1_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5HEU1_ZINOF)

HSP 1 Score: 152 bits (385), Expect = 1.020e-37
Identity = 92/246 (37.40%), Postives = 136/246 (55.28%), Query Frame = 1 
Query:  352 LRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKNAVKEARPPAQEKDG-GMLGLSG-IAGRNIEVSSEDADKDKDFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQKSPNWSSIPETD 1083
            L +  AE + FL  Y+VR + +   +L  +++ A +E+ PRKKF+FR++ +      + +    +K    + R  A  +D  G     G I  ++  VS E+   + DF +SDL  C + +   L AL +  LT+ RV  GPV G I +E   DC+++ A  Q+RIH +   DFY+ V S PIIEDCSA+RFAP  L+Y   + +L       GL E    W +V DFKW RA +SPNWS IP+ +
Sbjct:  326 LDRLVAENSYFLPTYEVRSSLKAISVLKEALDAANSELLPRKKFSFRNKTSKKDPICLVKEIEEEKGPSSDKRVLAAVRDSPGFRNKEGSILIKHFRVSEEE---EGDFTLSDLNCCEIYLKGRLRALFIHRLTNCRVYAGPVLGSILIEEVNDCLLMLASHQIRIHHATATDFYLQVRSRPIIEDCSAVRFAPYRLFYEGIDTELRDC----GLGEETRNWANVDDFKWLRAVQSPNWSLIPDEE 564
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A2I0VTI8_9ASPA (Tubulin-folding cofactor C n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VTI8_9ASPA)

HSP 1 Score: 145 bits (366), Expect = 1.670e-36
Identity = 94/270 (34.81%), Postives = 134/270 (49.63%), Query Frame = 1 
Query:  322 FDGLIDRVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKNAVKEARPPAQEKDGGMLGLSGIAGRNIEVSSEDADKDK----------------DFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQKSPNWSSIPETD 1083
             D + + +  L +  +E + FL  Y+VR + +    L   VE+A AEIAPRKKF F+S+                 ++ KE    A+E +   + +S  A +NI +S     ++K                DF+I DL +C V +     AL +  L + R+  GPV G I +E   +C+ + A  Q+RIH +   DFY+ V S PIIEDCS LRFAP  L Y   +  L  S    GL E    W +V DF+W RA +SPNW  IPE +
Sbjct:   99 LDKVSESISDLEKIVSEHSYFLPPYEVRSSLKTIEELKEMVESANAEIAPRKKFTFKSK----------------ASSKKEPAALAKESEQ-FITVSNAASQNISLSDSPGFRNKQGEILIKRFRVSESEGDFSIVDLDSCDVYLKGRFRALFIHRLRNCRIFTGPVLGSILIEDVNNCLFMLASHQIRIHQARECDFYLRVRSRPIIEDCSGLRFAPYRLLYEGIDKDLSDS----GLEEETRNWANVDDFRWLRAVQSPNWCLIPEEE 347
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BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Match: A0A2G2ZJA8_CAPAN (Tubulin-folding cofactor C n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G2ZJA8_CAPAN)

HSP 1 Score: 144 bits (364), Expect = 2.460e-36
Identity = 91/263 (34.60%), Postives = 136/263 (51.71%), Query Frame = 1 
Query:  322 FDGLIDRVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVETARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKNAVKEARPPAQEKDGGMLGLSGIAG----RNIEVSSE-DADKD---KDFNISDLTNCTVKILHVLGALRLRGLTSSRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIEDCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQKSPNWSSIPETDR 1086
             D +   +  L +  AE +  L +Y+VR   +    L   VE    E+ PRKKFAF+++         A+  P  K+   E R   + +  G   L    G    +N ++  E + D D   ++F +SDL +C V+++  + AL +  L   +V  GPV G + +E  ++CV V A  Q+RIH ++  DFY+ V S PIIED +++RFAP  L Y   E  LE + L     E    W +V DFKW RA +SPNWS +PE +R
Sbjct:   93 LDNVSISITNLEKLVAENSFSLPSYEVRTCLKTVADLKQFVEQVTCEVIPRKKFAFKNK--------SAKKIPVQKDVAYENRMDTESQGSGFRILENSPGFRDKKNEDLVKEFNRDNDGEIREFVLSDLRHCDVRLMGCVSALFVNKLIDCKVYVGPVFGSVLIEEVENCVFVMASHQIRIHQAKGCDFYLQVRSRPIIEDSNSVRFAPYCLKYDGIEKDLEEANL----GEETGNWSNVDDFKWLRAVQSPNWSILPENER 343
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig443.11195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL45_9PHAE1.700e-11453.27C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A7S2T903_9CHLO8.470e-4436.53Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
UPI001EB0161A1.470e-4135.66tubulin-specific chaperone C-like n=1 Tax=Haliotis... [more]
A0A1V9ZJD4_9STRA1.110e-3936.08Tubulin-specific chaperone C n=1 Tax=Achlya hypogy... [more]
A0A7S1CQH9_9STRA1.270e-3937.36Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6P7XD79_9AMPH2.750e-3835.20tubulin-specific chaperone C n=1 Tax=Microcaecilia... [more]
A0A8J5GN15_ZINOF3.070e-3836.99Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
A0A8J5HEU1_ZINOF1.020e-3737.40Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
A0A2I0VTI8_9ASPA1.670e-3634.81Tubulin-folding cofactor C n=1 Tax=Dendrobium cate... [more]
A0A2G2ZJA8_CAPAN2.460e-3634.60Tubulin-folding cofactor C n=4 Tax=Capsicum TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig443contigH-paniculata_contig443:28357..33535 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.5
Seed ortholog evalue9.7e-94
Seed eggNOG ortholog2880.D8LNN3
Preferred nameTBCC
KEGG koko:K03860,ko:K21766
KEGG ReactionR05916
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0003674,GO:0003824,GO:0003924,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005874,GO:0005929,GO:0006457,GO:0006996,GO:0007010,GO:0007017,GO:0007021,GO:0007023,GO:0008047,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0030234,GO:0030695,GO:0032391,GO:0032991,GO:0034622,GO:0035869,GO:0042995,GO:0043005,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043547,GO:0043933,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0050790,GO:0051082,GO:0051087,GO:0051336,GO:0051345,GO:0060589,GO:0065003,GO:0065007,GO:0065009,GO:0071840,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098772,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120038,GO:1990727
EggNOG free text desc.post-chaperonin tubulin folding pathway
EggNOG OGsKOG2512@1,KOG2512@2759
Ec32 ortholog descriptionputative: Beta-tubulin folding cofactor C
Ec32 orthologEc-08_006490.1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons7
Model size1131
Cds size1131
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930335.413239-CDS-H-paniculata_contig443:28356..285051622930335.413239-CDS-H-paniculata_contig443:28356..28505Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 28357..28505 -
1691481246.6841345-CDS-H-paniculata_contig443:28356..285051691481246.6841345-CDS-H-paniculata_contig443:28356..28505Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 28357..28505 -
1622930335.434373-CDS-H-paniculata_contig443:28822..289701622930335.434373-CDS-H-paniculata_contig443:28822..28970Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 28823..28970 -
1691481246.6977932-CDS-H-paniculata_contig443:28822..289701691481246.6977932-CDS-H-paniculata_contig443:28822..28970Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 28823..28970 -
1622930335.5443537-CDS-H-paniculata_contig443:29248..293751622930335.5443537-CDS-H-paniculata_contig443:29248..29375Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 29249..29375 -
1691481246.7153013-CDS-H-paniculata_contig443:29248..293751691481246.7153013-CDS-H-paniculata_contig443:29248..29375Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 29249..29375 -
1622930335.5596182-CDS-H-paniculata_contig443:29928..300561622930335.5596182-CDS-H-paniculata_contig443:29928..30056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 29929..30056 -
1691481246.729255-CDS-H-paniculata_contig443:29928..300561691481246.729255-CDS-H-paniculata_contig443:29928..30056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 29929..30056 -
1622930335.579372-CDS-H-paniculata_contig443:30514..306761622930335.579372-CDS-H-paniculata_contig443:30514..30676Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 30515..30676 -
1691481246.738314-CDS-H-paniculata_contig443:30514..306761691481246.738314-CDS-H-paniculata_contig443:30514..30676Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 30515..30676 -
1622930335.5977812-CDS-H-paniculata_contig443:31869..321621622930335.5977812-CDS-H-paniculata_contig443:31869..32162Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 31870..32162 -
1691481246.7541013-CDS-H-paniculata_contig443:31869..321621691481246.7541013-CDS-H-paniculata_contig443:31869..32162Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 31870..32162 -
1622930335.6125371-CDS-H-paniculata_contig443:33411..335351622930335.6125371-CDS-H-paniculata_contig443:33411..33535Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 33412..33535 -
1691481246.7705216-CDS-H-paniculata_contig443:33411..335351691481246.7705216-CDS-H-paniculata_contig443:33411..33535Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig443 33412..33535 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig443.11195.1prot_H-paniculata_contig443.11195.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig443 28357..33535 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig443.11195.1

>prot_H-paniculata_contig443.11195.1 ID=prot_H-paniculata_contig443.11195.1|Name=mRNA_H-paniculata_contig443.11195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=377bp
EEEARRKQAHLNFTASHQARHAARQGIVGYVSERRGDFGHFIHSFRRAAN
HAITHHKFVVSLSIDISEELATLVPAHPQAAAGSEISGARHAQVGSAASS
VEDVGAAFDGLIDRVKRLRQRTAEATLFLSAYDVRRAHEETGMLLHSVET
ARAEIAPRKKFAFRSRRTGPGSAHVARINPFDKNAVKEARPPAQEKDGGM
LGLSGIAGRNIEVSSEDADKDKDFNISDLTNCTVKILHVLGALRLRGLTS
SRVICGPVRGPIYVEACKDCVVVAAGRQLRIHDSERIDFYVLVASGPIIE
DCSALRFAPSGLWYPAHEGQLEASELLSGLSEVMNGWEDVKDFKWHRAQK
SPNWSSIPETDREKDHLIISPHLQHF*
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mRNA from alignment at H-paniculata_contig443:28357..33535-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig443.11195.1 ID=mRNA_H-paniculata_contig443.11195.1|Name=mRNA_H-paniculata_contig443.11195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5179bp|location=Sequence derived from alignment at H-paniculata_contig443:28357..33535- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAGAAGAAGCCCGAAGAAAACAGGCGCACTTGAACTTCACCGCTTCGCA
CCAGGCACGGCATGCGGCACGCCAAGGCATCGTTGGGTACGTTTCGGAAC
GGCGAGGTGATTTTGGTCATTTTAGTCATTTTGAATTCGCGCGGCGCTCT
GGGCATGTTGCATACGGTGTGCTCGGACGCATGAAGCATCAGACGCGGAT
GCTCGTCTTTGCTGTAATTCACAGTCATGGAGAGGGATTGGCTATTATTG
GCAATATACTGGTAGATTGGTCTCGCATCTGGGTCCATTGCCTCGTTGGA
ATGCTGCTACACTGTAAAGCGCTGCTGTCTGTGAAGGTGATGTCTGTCAA
TACCCGCAGACTATGTACTCGTAAAGCGCAATTATCTGGGTGCCAACGAG
TATTTTACCTATACTGCTGCACGGTCAGGGTGCCTTTAGCTCTGAGTAGT
GGAGCGATACCCCAGAAGCAGCAGGACGAGGGGCACTGAAATCAAGTAGT
TTTTGCATCAGATTGAAATCTAGTGGTCTTTCCATCACAACACTGAAAGG
GCTCTATAAAGTTGGTCATAACAACACAGATTCAAGCTGTCCTTTCTCAG
GGTGAGCACTGTGGACTGGCGCCGGAATGCTAGATTACTTGCCTGCACCT
CGCATATCTTTGGAAAGACACTGTGATTAAGCAGCTTTCTGTCTACAGTA
ACAGTAGCACCAATAAGAGGAAGAGGGATCGGGGAAGAGGTATCGCGCAA
TGCAACCTGTGCTGATCTTCACAATCTCCAGTAATTTTCAACTTACAACC
AATTGAGGGGGGTATAGCTCAGCTATGGAGAGCTACGAATCCCCCAGCCA
CATTTTTCTGTACGCGATCGATATCCACTGTGAGATCGAAAGCGCGCCAT
GCCAGAAAATCGGATGAAATTTGTCCAACGCACAAACCATATGGGAGCGA
TTCCACAGAATGTGATGGGCTCGGTCTATCTCATGTGCTTGCGATTTCGC
TTCACGGTTTTTGCCACAGAGCTGCCGACCCAGATAACGACAACCTTGCG
GAATCTGCGGTCATCTTCATGGAGAATTTCAACAAAGAGATTGCAGGTGT
GACTCATCAATGCGCGATAAATGGGATGTGCCCTGCAGCACAGGATGTCC
ATGACATTTTGGCGTCGCGCATGTTGTTGCGTCCCAATGTCAAGTCCAGA
TGCTAGCAGAACATACTCCAGCGGCTTTGGAAATGGTTAATCGTCTATTT
GTACAGACACGTAGGCGAAGTGCACCTAGATTGTTGGAGCACAAGATATC
ATGCGGTTATAATATAGGGTTTAAAGCTGTACACCGACGCTCTCTCCAAC
ATTATATACGACAATATTAGTAGTACATTCCTTCCGTCGTGCCGCTAACC
ACGCCATAACGCATCACAAATTTGTGGTATCCCTTTCCATAGACATATCC
GAGGAGCTAGCCACGCTAGTTCCAGCCCACCCACAGGCAGCCGCTGGATC
GGAAATATCCGGCGCAAGGCATGCGCAGGTGGGATCAGCTGCCAGCAGTG
TGGAGGATGTGGGTGCAGCATTCGATGGACTGATCGACAGAGTCAAGAGG
CTCCGGCAGCGTACCGCAGAAGCGACGCTGTTCTTGTCGGCCTACGACGT
CCGACGAGCCCATGAGGTATGTCCCACCGTATGGTATATCCGTACTTCGG
TTCATCGATTCGTACTTTTTGCCAGCATTTCATGGGCTACTTTGTACGAA
GTATTTTGAAAGTCGTGTGATGACCACAGAAAAACGCGGGATTTTTGTCA
GTTTTAACCGGCACCAAGGGGCGAGCACAGTGTTGTGGTTTGCGCCATGC
TATCCCACTTTTTGAATACCAATAAAGTCAAAGAGCTTCGCGTGACAGCA
CTCGCTGCACCTTTGTTCGACCTATGCGTAGGCAAGGCGTGCATAGGGAG
TGGGCATGGTCACGTGGTGTCAAAGTCTCAATCGTTCAGAAGGTGGTTAT
GTGTATATGCTCTGCGACGCGAGTATGGAGAGGGCAAAGTGACGAAGCTA
CCGGCGGGTACAGTGTAAAACACCCCTACTAGAGTAATACTGTCCCCTCA
CAAAATGCCACCTGGGTGATGGCAAGTTTGGGCTGTTTGGTCGTTGTCAC
TGAGGATACAGAGTATACTACCACCGATGATAACCTGGATGATGACTTAG
AATATCATCCCCGGTGACAAGGTTAGTTGTGATCATACACCAGGTGCATA
GGAAGATATGTATATAGCGCTATAGTTATATTCCACCACGTGGACGTGTG
GGGCGGTTCTTCCCACAGCACCCCCACGTGCGTTATGAAGGTGAACGACT
AAGGTGTATGATGACAAGCGAGCACGGTACAGTATGACATGCTAAAACCC
CTCTGCTCATTACCCCTCCTTGCTACCTGGGGAAGGTTGTGCCACCGTAC
CGCATGTCACTCCATCACCCTCCCTATTTATCTCCTCCGGGTGACATTAC
CAACATTCAGCCAAGATGCTATCACCGGGGATACGGAGTACACTACCCCC
CGCCCCCTCGAATACCACTCCCGGGTGATACGGTTTCCCTTTGAAAAAAC
GTGTTTGTATTACCTGGGGATATTTTACACTGTCAACTACGGTAGTCTTT
CGCGCGCAGAGACATACAGAAACAGAAATTCTCGTGGTGTGATTACGTGC
AATCGGTGTGTTGCGTGATAATGCATCCGGTGAGGGTGTAAACCTGGGTT
GTGGATGATCATACGGCTAACATATAGGCGTGTAGTCTGTGATGTAGCAA
TGCTTCGGTCTCAGTTTATTCTGAGCCGTGCTCTTATATGTTGGTTTCAC
GCCCTCCAGGAGACAGGCATGCTGCTGCACAGCGTCGAAACGGCCCGCGC
AGAGATAGCACCGAGAAAAAAGTTTGCGTTTCGCAGCAGAAGGACTGGGC
CTGGAAGTGCTCACGTGGCCAGGATTAACCCGTTTGACAAAAACGCTGTG
AAGGAGGCCAGACCGCCGGCGGTGGCAGGTGAAGCATGAGCGGACATTCG
AAAGAGTTAGAAACCGCCGCGGTTCGGGGGTTGGAAGCAAAACAGTTTAG
ACACAGTTTTGAGGTTGGTAGCTGATGGTGCCGCCTGAGTTCACGCACAG
AGCTTATGTCCTTGAGAGGAGAAACTAATCTCTTGCCAGATGCTGCGGCA
TTGTTTTTCTTCGAAAGAGCCTGGCGTGTGTTGGCATCCTCGACGCAGTT
GTACATGTATGGGAGATGTCTCGTTGTTCAAGAAGATTTTGTAGCACGAA
AGATAGCATTTGCGTGCCGGGACGATCAGTGCAGCTGATCATGTCTGAAT
TGGACAGTTGTGACATCGGCTAAACATGGAACAGATTCAGTACATTTTCA
AAAAATGTCCCCATGTTACCTCGCATGGTATCGATTTAGTAAGTTGCTCT
TGATCACCAATTGTAACGGTTTTTCAGAGCAAGAGAAAGACGGAGGTATG
CTGGGACTGAGCGGAATTGCAGGGAGGAACATTGAAGTGAGCTCGGAGGA
CGCCGACAAGGACAAGGATTTCAATATCTCAGATCTCACCAACTGTACAG
TCAAAATGTGAGTCTTGTTGGTTTCATGTCTGTTGATTACGCCCTAGCTA
GAGCAGTATGAAGCTCAACTGCACCCCCGCAGTTAGCTGAAGGTCTACCA
GGCCCACGTACAGTAGTGGTGATGGATAAACTAGAGCTGAATTATCGGCG
GTGCCTACAGCATCGGCAGGTCACCGGTACACCAAATATGTCATACTTGA
AAAACGGTGCAAATCCTCCATGTCATGACCCTACCCCGGTCGTCACATTC
TCCCATATTGAGAGTACCCGAACAATTTCCTGCCGTTGTACACGGCGAAA
TGTCAACGAGTGCCGCCAGTCTGTGAAGTATGTTGTGACCGACTAATCGA
AATGACTGCGCAAGGTCCGCATGTTTTCTGCACTCAATGATGATGATGTT
ACTCAGTACGCCGGAGAGGTGCTTTGGTTGGCATATCCAAAGATGTCGCG
GTATACGTACTTCGCCACTCGCTGCTCCACTTTGTTGGAGGATTACTCCA
GGATCTGATCCCCCTCACATCACTTTTCCCTCTCATCCTGTATACATTAC
TGCTGACCAGTCTACATGTTCTTGGAGCTCTGCGCCTCCGCGGATTAACT
TCGAGTAGGGTAATTTGCGGACCCGTTCGCGGCCCTATTTATGTCGAGGC
TTGCAAAGACTGTGTCGTGGTGGCTGCGGGTCGACAGGTACACTTCGCAT
TATTATCATTATTATTATCATCATTGTTAATGTGGGTGCCAGCCTTCGCC
ATTCTCGGCACGCCTTACTGTCTGTACGAGATCTGTGGGTGTCTTGGGTT
ATTGTCTAGCCCTGTCTGGGAAATAGTCATTCTCCTGAGCAGCTATGGGG
CTGTCCCCCTACCCTCACCCCCTCTCAGGGATTTTCCGAGAATTAATTCG
CCAGCTTATCGCTTTTCCCGTGCTTTTCACTTTCGGTTGACTGATATACG
TGCTTTCACACACAGTTGCGGATACACGACAGTGAGCGCATTGACTTTTA
TGTGCTCGTAGCCAGCGGCCCCATCATTGAAGACTGCAGCGCCCTCAGGT
TCGCTCCGTCGGGGCTGTGGTACCCGGCGCACGAGGGACAGCTGGAGGCG
AGCGAACTATTGTGTTACAGATGTTTTGCTTGTTGCTGATGGATGGGTTA
TGTGTTAACACGGCATATTTATATCGTATATATGAAGTTGAAAATATTTT
TTCACGAAGTTACGCAGTATTTTGTTTCGCACGGCATTTGCACGATATGG
TTTAGTGTGGTTGTGGGTATTGGTGTAGTACCAACGAACAGGTATGGCGC
ACTTGTTGTTGGCAACTCATGATTCTGTTGCGTCAATTTCACATTTTTCA
CTCCTCAGTCAAGTTTTCGTAATATGCTTCAACACCCGCCAGCAACATGA
TCGTCTTTTGTATGGGCGTCTAACAGGAAGCCGGCCTTTCAGAGGTGATG
AACGGGTGGGAGGACGTGAAAGATTTCAAATGGCATCGAGCGCAGAAATC
GCCCAATTGGAGCTCCATCCCAGAGACGGACCGGGAAAAGGATCACCTCA
TCATTTCTCCACACCTCCAACACTTTTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig443:28357..33535-

>mRNA_H-paniculata_contig443.11195.1 ID=mRNA_H-paniculata_contig443.11195.1|Name=mRNA_H-paniculata_contig443.11195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2262bp|location=Sequence derived from alignment at H-paniculata_contig443:28357..33535- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAGAAGAAGCCCGAAGAAAACAGGCGCACTTGAACTTCACCGCTTCGCA
CCAGGCACGGCATGCGGCACGCCAAGGCATCGTTGGGTACGTTTCGGAAC
GGCGAGGTGATTTTGGTCATTTTAGAAGAAGAAGCCCGAAGAAAACAGGC
GCACTTGAACTTCACCGCTTCGCACCAGGCACGGCATGCGGCACGCCAAG
GCATCGTTGGGTACGTTTCGGAACGGCGAGGTGATTTTGGTCATTTTATA
CATTCCTTCCGTCGTGCCGCTAACCACGCCATAACGCATCACAAATTTGT
GGTATCCCTTTCCATAGACATATCCGAGGAGCTAGCCACGCTAGTTCCAG
CCCACCCACAGGCAGCCGCTGGATCGGAAATATCCGGCGCAAGGCATGCG
CAGGTGGGATCAGCTGCCAGCAGTGTGGAGGATGTGGGTGCAGCATTCGA
TGGACTGATCGACAGAGTCAAGAGGCTCCGGCAGCGTACCGCAGAAGCGA
CGCTGTTCTTGTCGGCCTACGACGTCCGACGAGCCCATGAGTACATTCCT
TCCGTCGTGCCGCTAACCACGCCATAACGCATCACAAATTTGTGGTATCC
CTTTCCATAGACATATCCGAGGAGCTAGCCACGCTAGTTCCAGCCCACCC
ACAGGCAGCCGCTGGATCGGAAATATCCGGCGCAAGGCATGCGCAGGTGG
GATCAGCTGCCAGCAGTGTGGAGGATGTGGGTGCAGCATTCGATGGACTG
ATCGACAGAGTCAAGAGGCTCCGGCAGCGTACCGCAGAAGCGACGCTGTT
CTTGTCGGCCTACGACGTCCGACGAGCCCATGAGGAGACAGGCATGCTGC
TGCACAGCGTCGAAACGGCCCGCGCAGAGATAGCACCGAGAAAAAAGTTT
GCGTTTCGCAGCAGAAGGACTGGGCCTGGAAGTGCTCACGTGGCCAGGAT
TAACCCGTTTGACAAAAACGCTGTGAAGGAGGCCAGACCGCCGGCGGAGA
CAGGCATGCTGCTGCACAGCGTCGAAACGGCCCGCGCAGAGATAGCACCG
AGAAAAAAGTTTGCGTTTCGCAGCAGAAGGACTGGGCCTGGAAGTGCTCA
CGTGGCCAGGATTAACCCGTTTGACAAAAACGCTGTGAAGGAGGCCAGAC
CGCCGGCGCAAGAGAAAGACGGAGGTATGCTGGGACTGAGCGGAATTGCA
GGGAGGAACATTGAAGTGAGCTCGGAGGACGCCGACAAGGACAAGGATTT
CAATATCTCAGATCTCACCAACTGTACAGTCAAAATCAAGAGAAAGACGG
AGGTATGCTGGGACTGAGCGGAATTGCAGGGAGGAACATTGAAGTGAGCT
CGGAGGACGCCGACAAGGACAAGGATTTCAATATCTCAGATCTCACCAAC
TGTACAGTCAAAATTCTACATGTTCTTGGAGCTCTGCGCCTCCGCGGATT
AACTTCGAGTAGGGTAATTTGCGGACCCGTTCGCGGCCCTATTTATGTCG
AGGCTTGCAAAGACTGTGTCGTGGTGGCTGCGGGTCGACAGTCTACATGT
TCTTGGAGCTCTGCGCCTCCGCGGATTAACTTCGAGTAGGGTAATTTGCG
GACCCGTTCGCGGCCCTATTTATGTCGAGGCTTGCAAAGACTGTGTCGTG
GTGGCTGCGGGTCGACAGTTGCGGATACACGACAGTGAGCGCATTGACTT
TTATGTGCTCGTAGCCAGCGGCCCCATCATTGAAGACTGCAGCGCCCTCA
GGTTCGCTCCGTCGGGGCTGTGGTACCCGGCGCACGAGGGACAGCTGGAG
GCGAGCGAACTATTGTTTGCGGATACACGACAGTGAGCGCATTGACTTTT
ATGTGCTCGTAGCCAGCGGCCCCATCATTGAAGACTGCAGCGCCCTCAGG
TTCGCTCCGTCGGGGCTGTGGTACCCGGCGCACGAGGGACAGCTGGAGGC
GAGCGAACTATTGTCCGGCCTTTCAGAGGTGATGAACGGGTGGGAGGACG
TGAAAGATTTCAAATGGCATCGAGCGCAGAAATCGCCCAATTGGAGCTCC
ATCCCAGAGACGGACCGGGAAAAGGATCACCTCATCATTTCTCCACACCT
CCAACACTTTTGACCGGCCTTTCAGAGGTGATGAACGGGTGGGAGGACGT
GAAAGATTTCAAATGGCATCGAGCGCAGAAATCGCCCAATTGGAGCTCCA
TCCCAGAGACGGACCGGGAAAAGGATCACCTCATCATTTCTCCACACCTC
CAACACTTTTGA
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