prot_H-paniculata_contig443.11194.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig443.11194.1
Unique Nameprot_H-paniculata_contig443.11194.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length101
Homology
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BLAST of mRNA_H-paniculata_contig443.11194.1 vs. uniprot
Match: A0A6H5JR64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR64_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.710e-36
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 0 
Query:    1 MVVRVGGSMAYMPGDGMLNFEDSIRTVGELKSAIESALGLPTFKQRIFTSGGRLCEDDSAILEAHKENPDGGHKMFML 78
            MVV+VGGS AY+PGDG+L FED ++TVG+LKSAI S   +P   QRIFTSGGRLC+DDSAILEAHK NPDGGHKMFML
Sbjct:    1 MVVKVGGSFAYLPGDGLLTFEDHVQTVGDLKSAIFSETNIPVIHQRIFTSGGRLCDDDSAILEAHKPNPDGGHKMFML 78
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig443.11194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JR64_9PHAE1.710e-3675.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 17..84
e-value: 4.2E-5
score: 25.2
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 26..63
score: 8.59
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 25..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig443contigH-paniculata_contig443:12406..27199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig443.11194.1mRNA_H-paniculata_contig443.11194.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig443 12402..27442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig443.11194.1 ID=prot_H-paniculata_contig443.11194.1|Name=mRNA_H-paniculata_contig443.11194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
MVVRVGGSMAYMPGDGMLNFEDSIRTVGELKSAIESALGLPTFKQRIFTS
GGRLCEDDSAILEAHKENPDGGHKMFMLGQSPPCNFQIKPSALLFLSMVA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf