prot_H-paniculata_contig44276.11190.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig44276.11190.1
Unique Name	prot_H-paniculata_contig44276.11190.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	95

Homology

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: D8LK14_ECTSI (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK14_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 1.300e-44
Identity = 85/91 (93.41%), Postives = 87/91 (95.60%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLHRGHLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            VERDRGITVKAQTASMLH GHLLNLIDTPGHVDFSYEVVRSLSACQGALLLVD+TQGVQAQTLSTAKAA AAGL LVPVVTKIDL HANV+
Sbjct:  110 VERDRGITVKAQTASMLHDGHLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLKLVPVVTKIDLHHANVE 200

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: A0A7S1CPS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPS2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.720e-37
Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLH------RGHLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            VER+RGITVKAQTASM+H        +LLNLIDTPGHVDFSYEV RSL+ACQGALLLVD TQGVQAQT++   AA  AGLT+VPV+TK+DLP A+ +
Sbjct:   11 VERERGITVKAQTASMMHTDPVTGEDYLLNLIDTPGHVDFSYEVSRSLAACQGALLLVDCTQGVQAQTIANYHAARTAGLTIVPVLTKVDLPTADPE 107

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: A0A836CPP8_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPP8_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.070e-36
Identity = 73/92 (79.35%), Postives = 86/92 (93.48%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLHRG-HLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            VER+RGITVKAQTASML++G +LLNLIDTPGHVDFSYEVVRSLS+CQGALLLVD+TQGVQAQTL+T +AA  AG+ ++PVVTKIDLP+A V+
Sbjct:  114 VERERGITVKAQTASMLYQGEYLLNLIDTPGHVDFSYEVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVE 205

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: A0A3R6VMS1_9STRA (Tr-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VMS1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 7.780e-35
Identity = 65/97 (67.01%), Postives = 79/97 (81.44%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLHRG------HLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            VER+RGITVKAQTASML+        +LLNL+DTPGHVDFSYEV RSLSAC+G LLLVD++QG+Q+QTL+T  AA   GL +VPV+TKID+PHA  +
Sbjct:   29 VERERGITVKAQTASMLYEDKLSNTRYLLNLVDTPGHVDFSYEVSRSLSACEGVLLLVDASQGIQSQTLATYHAAKEKGLQVVPVLTKIDMPHAQPE 125

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: A0A6H5KYX2_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX2_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.000e-34
Identity = 80/131 (61.07%), Postives = 82/131 (62.60%), Query Frame = 0

Query:    6 GITVKAQTASMLHRGHLLNLIDTPGHVDFSYE---------------------------------------------VVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            GITVKAQTASMLH GHLLNLIDTPGHVDFSYE                                             VVRSLSACQGALLLVD+TQGVQAQTLSTAKAA AAGL LVPVVTKIDL HANV+
Sbjct:  146 GITVKAQTASMLHDGHLLNLIDTPGHVDFSYERYLTCSLVLLEGDDVHSDRKPELAATAILHVRNETTSPNAFVCDKVVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLKLVPVVTKIDLHHANVE 276

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: A0A2P4X6F8_9STRA (GTP-binding protein LepA (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6F8_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.810e-34
Identity = 67/97 (69.07%), Postives = 78/97 (80.41%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLHRG------HLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            VER+RGITVKAQTASM+HR        +LNL+DTPGHVDFSYEV RSLSAC+G LLLVD +QG+QAQTL+T  AA    L +VPV+TKID+PHA VD
Sbjct:   98 VERERGITVKAQTASMVHRDPKTGETFMLNLVDTPGHVDFSYEVNRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERDLHVVPVLTKIDMPHAEVD 194

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: A0A7S2RTM0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RTM0_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.140e-33
Identity = 63/89 (70.79%), Postives = 77/89 (86.52%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLHRGHLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHAN 89
            VER+RGITVKA+TASML  GHL+NL+DTPGHVDF YEV RSL +CQGALLLVD+TQGVQAQTL+   +A   GL ++PV+TK+DLPH++
Sbjct:  129 VERERGITVKARTASMLFDGHLINLVDTPGHVDFDYEVKRSLKSCQGALLLVDATQGVQAQTLANYNSAKDCGLEIIPVLTKMDLPHSD 217

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: A0A662XK90_9STRA (Tr-type G domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XK90_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.690e-33
Identity = 68/97 (70.10%), Postives = 79/97 (81.44%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLHR------GHLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            VER+RGITVKAQTASM+HR       +LLNL+DTPGHVDFSYEV RSLSAC+G LLLVD +QG+QAQTL+T  AA    L +VPV+TKID+PHA VD
Sbjct:  127 VERERGITVKAQTASMVHRDPETGRAYLLNLVDTPGHVDFSYEVNRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERNLRVVPVLTKIDMPHAQVD 223

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: W7TE65_9STRA (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TE65_9STRA)

HSP 1 Score: 130 bits (326), Expect = 4.010e-33
Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLHRG------HLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            VER+RGITVKAQTASM++R       +LLNL+DTPGHVDF+YEV RSLSACQGALLLVD+TQG+QAQTLST   A  A L+++PVVTK DLPHA  D
Sbjct:  115 VERERGITVKAQTASMVYRHPKDGKEYLLNLVDTPGHVDFAYEVSRSLSACQGALLLVDATQGIQAQTLSTYAFAQEAKLSIIPVVTKSDLPHAQTD 211

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BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Match: A0A0P1AZH3_PLAHL (Gtp-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZH3_PLAHL)

HSP 1 Score: 129 bits (324), Expect = 4.960e-33
Identity = 68/97 (70.10%), Postives = 79/97 (81.44%), Query Frame = 0

Query:    1 VERDRGITVKAQTASMLHRG------HLLNLIDTPGHVDFSYEVVRSLSACQGALLLVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVD 91
            VER+RGITVKAQTASMLHR       ++LNL+DTPGHVDFSYEV RSLSAC+G LLLVD +QG+QAQTL+T  AA    L +VPV+TKID+PHA VD
Sbjct:   95 VERERGITVKAQTASMLHRDSITGMTYMLNLVDTPGHVDFSYEVNRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERNLHVVPVLTKIDMPHAEVD 191

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig44276.11190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LK14_ECTSI	1.300e-44	93.41	Translation factor GUF1 homolog, mitochondrial n=1...	[more]
A0A7S1CPS2_9STRA	2.720e-37	71.13	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A836CPP8_9STRA	1.070e-36	79.35	Translation factor GUF1 homolog, mitochondrial n=1...	[more]
A0A3R6VMS1_9STRA	7.780e-35	67.01	Tr-type G domain-containing protein (Fragment) n=1...	[more]
A0A6H5KYX2_9PHAE	2.000e-34	61.07	Tr-type G domain-containing protein n=1 Tax=Ectoca...	[more]
A0A2P4X6F8_9STRA	3.810e-34	69.07	GTP-binding protein LepA (Fragment) n=1 Tax=Phytop...	[more]
A0A7S2RTM0_9STRA	1.140e-33	70.79	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]
A0A662XK90_9STRA	2.690e-33	70.10	Tr-type G domain-containing protein (Fragment) n=2...	[more]
W7TE65_9STRA	4.010e-33	71.13	Translation factor GUF1 homolog, mitochondrial n=2...	[more]
A0A0P1AZH3_PLAHL	4.960e-33	70.10	Gtp-binding protein n=1 Tax=Plasmopara halstedii T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Transcription factor, GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 40..51 score: 29.79 coord: 4..12 score: 45.21 coord: 76..85 score: 30.64 coord: 24..34 score: 63.17
IPR000795	Transcription factor, GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 2..90 e-value: 1.7E-27 score: 96.3
IPR000795	Transcription factor, GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 1..94 score: 32.663
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 2..89 e-value: 3.1E-12 score: 44.5
None	No IPR available	GENE3D	3.40.50.300		coord: 1..94 e-value: 1.1E-32 score: 115.8
None	No IPR available	PANTHER	PTHR43512	FAMILY NOT NAMED	coord: 1..91
None	No IPR available	PANTHER	PTHR43512:SF3	TRANSLATION FACTOR GUF1, MITOCHONDRIAL	coord: 1..91
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig44276	contig	H-paniculata_contig44276:132..798 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig44276.11190.1	mRNA_H-paniculata_contig44276.11190.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig44276 132..798 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig44276.11190.1 ID=prot_H-paniculata_contig44276.11190.1|Name=mRNA_H-paniculata_contig44276.11190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
VERDRGITVKAQTASMLHRGHLLNLIDTPGHVDFSYEVVRSLSACQGALL
LVDSTQGVQAQTLSTAKAAAAAGLTLVPVVTKIDLPHANVDVRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000795	TF_GTP-bd_dom
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase