prot_H-paniculata_contig4427.11188.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4427.11188.1
Unique Nameprot_H-paniculata_contig4427.11188.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length273
Homology
BLAST of mRNA_H-paniculata_contig4427.11188.1 vs. uniprot
Match: D7G2Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q5_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 5.440e-46
Identity = 92/140 (65.71%), Postives = 106/140 (75.71%), Query Frame = 0
Query:  129 PTKTAVAQSVAPGIKVLPFEVREPSLGAVVVGQLVILEGSCYVWAAAEGSGMQGSLVAAVATRFDGGMPVATPLLAGMGSXXXXXXXXXXXXXXXXVSMAQRLCKRTGRVVFVSCDLPEDSQLLVAAVEGKVVKMLKADE 268
            PTK A +++V P +KV+ F+VREP+LGA VVG +V+L GSCYVWAA EGS  QGSL AAV TRFDGGMP ATPLLAG G+                VSMAQRLCKRTGRVVFVSCDL EDSQ+LVAAVE KVV +LKA++
Sbjct:  226 PTKDAGSEAVLPELKVVSFDVREPTLGASVVGHVVVLAGSCYVWAATEGSVAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGGGGVG-------VSMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEAKVVALLKAED 358          
BLAST of mRNA_H-paniculata_contig4427.11188.1 vs. uniprot
Match: A0A6H5K9L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L5_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.310e-44
Identity = 89/140 (63.57%), Postives = 105/140 (75.00%), Query Frame = 0
Query:  129 PTKTAVAQSVAPGIKVLPFEVREPSLGAVVVGQLVILEGSCYVWAAAEGSGMQGSLVAAVATRFDGGMPVATPLLAGMGSXXXXXXXXXXXXXXXXVSMAQRLCKRTGRVVFVSCDLPEDSQLLVAAVEGKVVKMLKADE 268
            PT+ A +++V P +K++ F+VREP+LGA VVG +V+L GSCYVWA  EGS  QGSL AAV TRFDGGMP ATPLLAG G+                VSMAQRLCKRTGRVVFVSCDL EDSQ+LVAAVE KVV +LKA++
Sbjct:  231 PTEDAGSEAVLPELKIVSFDVREPTLGASVVGHVVVLAGSCYVWATTEGSVAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGEGGVG-------VSMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEAKVVALLKAED 363          
BLAST of mRNA_H-paniculata_contig4427.11188.1 vs. uniprot
Match: A0A485KKL7_9STRA (Aste57867_8572 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKL7_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.420e-9
Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 0
Query:  161 QLVILEGSCYVWAAAEGS-GMQGSLVAAVATRFDGGMPVATPLLAGMGSXXXXXXXXXXXXXXXXVSMAQRLCKRTGRVVFVSCDLPEDSQLLVAAVEGKVVKMLKADE 268
            Q+ +L  +C+VW   +GS    GS+  AV TR+D  +P+A+ L+ G G                   MAQRL  RTG+ VFVSC+LPED   L A VE ++V  L+ ++
Sbjct:   38 QIWLLPNACFVWIGLDGSPARMGSMSTAVKTRYDP-LPLASSLIGGSGDEVEQ-------------QMAQRLVLRTGKQVFVSCNLPEDDMELCAFVERQIVARLREEQ 132          
BLAST of mRNA_H-paniculata_contig4427.11188.1 vs. uniprot
Match: A0A6G0WHC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHC5_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.360e-6
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 0
Query:  161 QLVILEGSCYVWAAAEGSGMQ-GSLVAAVATRFDGGMPVATPLLAGMGSXXXXXXXXXXXXXXXXVSMAQRLCKRTGRVVFVSCDLPEDSQLLVAAVEGKVVKMLKAD 267
            Q+ +L  +C+VW   + + +  GS+  AV T++D  +P+A+ L+ G                     MAQRL  RTGR VFVSC+LP+D   L A +E  ++K L  +
Sbjct:   33 QIWLLANACFVWIGLDSTAVSLGSMSTAVKTKYDP-LPLASSLIGGGNEMEQ--------------QMAQRLVLRTGRQVFVSCNLPDDDMELGAFIERAIIKRLNQE 125          
BLAST of mRNA_H-paniculata_contig4427.11188.1 vs. uniprot
Match: W4FSB2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSB2_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 5.710e-6
Identity = 39/106 (36.79%), Postives = 57/106 (53.77%), Query Frame = 0
Query:  161 QLVILEGSCYVWAAAEGSGM-QGSLVAAVATRFDGGMPVATPLLAGMGSXXXXXXXXXXXXXXXXVSMAQRLCKRTGRVVFVSCDLPEDSQLLVAAVEGKVVKMLK 265
            Q+ +L  +C+VW   + + +  GS+  AV TR+D  +P+A+ LL G                     MAQRL  RTG+ VFVSC+LPED   L A VE  +++ L+
Sbjct:   38 QIWLLAHACFVWVGLDETPVCMGSMSTAVKTRYDP-LPLASSLLGGGADDTEQ-------------QMAQRLVLRTGKQVFVSCNLPEDDMELGAYVERAILQRLR 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4427.11188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G2Q5_ECTSI5.440e-4665.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9L5_9PHAE1.310e-4463.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485KKL7_9STRA1.420e-938.53Aste57867_8572 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0WHC5_9STRA1.360e-634.26Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FSB2_9STRA5.710e-636.79Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032157Proteasome assembly chaperone 4PFAMPF16093PAC4coord: 161..245
e-value: 2.8E-15
score: 56.3
IPR032157Proteasome assembly chaperone 4PANTHERPTHR33559FAMILY NOT NAMEDcoord: 157..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4427contigH-paniculata_contig4427:3505..5568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4427.11188.1mRNA_H-paniculata_contig4427.11188.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4427 2500..5757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4427.11188.1 ID=prot_H-paniculata_contig4427.11188.1|Name=mRNA_H-paniculata_contig4427.11188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp
MEPTKSEEPEDMEIFDEQTSRDFDEQHMKDMEEAALTIQSRGWMGMAKAE
AKPSVAAAGQESQLPLMSPGRAIMGKLSAASSMFSRKKTDTAETEPVPPP
PPARIAATSMTAASAAAVAKTASTRTKNPTKTAVAQSVAPGIKVLPFEVR
EPSLGAVVVGQLVILEGSCYVWAAAEGSGMQGSLVAAVATRFDGGMPVAT
PLLAGMGSGGEGGGGGAGAGGGLGVSMAQRLCKRTGRVVFVSCDLPEDSQ
LLVAAVEGKVVKMLKADEAGSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032157PAC4