mRNA_H-paniculata_contig4423.11186.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4423.11186.1
Unique NamemRNA_H-paniculata_contig4423.11186.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.110e-41
Identity = 169/348 (48.56%), Postives = 217/348 (62.36%), Query Frame = 1
Query:    4 KLFDLVCAGASPRQWSDWLRPPLEHAAAAGEVDLLKMLIRAGARRWTALHYAASGGHETMVRVLMFAGANVSCTDMHENTPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLRCGTYSRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDMLVIEGGADIEATTSDRNAPIFIAA---QENNCNALRVILQHKANVEVQNEYGVRPLA-TASRYLAEGTVE---LLLRSGADETHVDNEGRSARDIVGKGVSSAER-PDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRVD 1023
            ++FDL     +P+QW+  ++P LEHAA  G   L + L+ AGA   TA+H A  GGH  +   L+ +GA+ S +D    TPL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++ R G    +AL+  A +GHV  +R LI+HG DV A N    GV +LH+A   ++  A+D+L +  GA+  + +   +  + +AA          L V+L+H A+V  Q   G   L   A+R   +G VE   LLLR GADETHV   G  A D +G  V   +R P+  +G   V++LLA+AP DRAWRRR  LVLCRA PDK+ L  D
Sbjct:   16 RIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYG--GVAALHHATANNKVEAMDVL-LRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEG---VRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSD 357          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 5.190e-32
Identity = 91/231 (39.39%), Postives = 130/231 (56.28%), Query Frame = 1
Query:  412 VDLRCGTYSRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDMLVIEGGADIEATTSDRNAPIFIAAQENNCN-ALRVILQHKANVEVQNEYGVRPLATASRYLAE----GTVELLLRSGADETHVDNEGRSARDIVGKGVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAF---PDKVNLRVDGNQGVGDAESQSAFGRHVA 1080
            V  R    S + L+ AA KG   V+RA++QHGVDV   N    G TSLH AA  ++ AA+D+LV E GA +E    D   P F+ A  N+C+ A   + +H AN+E ++  G  PL  A+R          V++LLR GADET ++ +GR+A ++VG  +  A  P  +  + RV+ LL +AP DRAWRRRG+LVLCRAF     ++       +G+G      + G  V+
Sbjct:  148 VHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDV---NRRTDGYTSLHVAALNNRVAAIDVLV-EAGAHVEVEDDDDCTP-FLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMSVSIGVRVS 373          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 2.160e-30
Identity = 86/200 (43.00%), Postives = 120/200 (60.00%), Query Frame = 1
Query:  412 VDLRCGTYSRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDMLVIEGGADIEATTSDRNAPIFIAAQENNCN-ALRVILQHKANVEVQNEYGVRPLATASRYLAE----GTVELLLRSGADETHVDNEGRSARDIVGKGVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAF 996
            V  R    S + L+ AA KG   V+RA++QHGVDV   N    G TSLH AA  ++ AA+D+LV E GA +E    D   P F+ A  N+C+ A   + +H +N+E ++  G  PL  A+R          V++LLR GADET ++ +GR+A ++VG  +  A  P  +  + RV+ LL +AP+DRAWRRRG LVLCRAF
Sbjct:   99 VRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDV---NRRTDGYTSLHVAALNNRVAAIDVLV-EAGAHVEVEDDDDCTP-FLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAF 293          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.910e-29
Identity = 124/426 (29.11%), Postives = 180/426 (42.25%), Query Frame = 1
Query:    7 LFDLVCAGASPRQWSDWLRPPLEHAAAAGEVDLLKMLIRAGARRWTALHYAASGGHETMVRVLMFAGANVSCTDMHENTPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLRCGTYSRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGV----TSLHYAAYFDQPAAVDMLVIEGGADIEATTSDRNAPIFIAAQENNCNALRVILQHKANVEVQNEYGVRPLATASRYLAEGTVELLLRSGADETHVDNEGRSARDIVGKGVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRVDGNQGVGDAESQSAFGRHVAKFARTVKIEVQRAPADSG--GEKCMMRGDI--ADEGSRDISSSVEARVIKLEQEGVFRRILGFL 1260
            +F LVC  A+P QW++WLR PLEHAAA G    +K   +A     T L    +GG E   + L+ AGA+    +      LLL                                                      ++ G+     +  AAC G   V+ A+++ G+D++  N N+  +      L  AA  ++ AA+ +L  E GADIEA  +                    + Q  A V  +    +  L++A  +       LLL  G DE  +D+EG +   +V + ++ A    R   + R+ RLLA AP DRAWRRRG LVL R  PD+V L V+      DA  Q    +   + A T ++EV       G  G    +R  I    EG+      V A ++ L +EGVFRRI+GFL
Sbjct:   18 IFKLVCDWATPEQWAEWLRAPLEHAAATGAGGDIKA--KAPHTWHTPLDLTVTGGKEAAAKALIMAGADGHMWEHRVAKDLLLSGANP-------------------------------------------------IQAGSNGNFPIHLAACHGLDEVVLAVVEKGIDLNCLN-NKREIPLLLALLRIAACENKAAAIRVL-FEAGADIEARLT--------------------LFQLGAKVNSKENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPP-LERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQ--QRPRRRASTGQVEVDGTNGGGGXTGASSGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 9.010e-28
Identity = 167/423 (39.48%), Postives = 220/423 (52.01%), Query Frame = 1
Query:    7 LFDLVCAGASPRQWSDWLRPPLEHAAAAGEVDLLKMLIRAGARRWTALHYAASGGHETMVRVLMFAGANVSCTDMHENTPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLRCGTYSRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDMLVIEGGADIEATTSDRNAPIFIAAQENNCNALRVILQHKANVEVQNEYGVRPLATASRYLA-EGTVEL---LLRSGADETHVDNEGRSARDIVGKGVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRVDGNQGVGDAESQSAFGRHVAKFARTVKIEVQRAPADS-GGEKCMMRGDIADEGSRDISSSVEARVIKLEQEGVFRRILGFL 1260
            + D +    + +Q ++ LR  LEHAAA G  DL + L+RAGA    ALH A  GGH  +V  L+ + A+++ TDM   TPL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LR   +   A   AA +GHV ++RA+I+HG DV A +  +   T+                                                            N   + PL  A R    +G  E+   LLR+GADET  + +G  A D++G+ V   +R   +  + RV+ LLA+AP DRAWRRRG L++CRA PD+V             E +   G H    AR  +   + A A    GE  +      DE +    + V ++VI L++EG+FR I+ +L
Sbjct:    1 MVDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQR--TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSL-LTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTED--VERVRELLANAPADRAWRRRGYLIMCRAQPDRV------------PERRMTSGTHYTNVARRTRSRAKMARARGIAGESTV------DESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 8.600e-27
Identity = 182/511 (35.62%), Postives = 243/511 (47.55%), Query Frame = 1
Query:    1 IKLFDLVCAGASPRQWSDWLRPPLEHAAAAGEVDLLKMLIRAGARR---W------------------------------------------TALHYAASGGHETMVRVLMFAGANVSCTDMHENTPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDL-----------------------------RCGTYSR-------TALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPA-----AVDMLVIEGGADI--EATTSDRNAPIFIAAQE--NNCNALRVILQHKANVEVQNEYGVRPLATASRYLAEGTVELLLRSGADETHVDNEGRSARDIVGK-GVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRVDGNQGVGDAESQSAFGRHVAKFARTVKIEVQRAPADSGGEKCMMRGDIADEGSRDISSSVEARVIKLEQEGVFRRILGFL 1260
            I++F L+   A+P QW +WLR PLEHAAA G +DL   L+ AGA     W                                          +ALH AA+ G +   R LM AGA+ +  D    +P   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 CG  S        + LE AA +GH  V++AL+           N+ G  +LHY A FD+       AV +L +  GAD+  + T      P+ +A      +   +  +L+  AN+  +      PL  A   L    VELLLR GADE   +N+G +  D+VG    +  +  +RE    R+ R+LA AP DR+WRRRG LVL R+ P +V++          + S S+  R     A+  ++  Q +  D    +  M  D+ D         +  R++ LE EG+FR ++GFL
Sbjct:   19 IEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSS-EVDTANDLGWAALHYVASFDETVRDKGDAVRVL-LGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHI-------ANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRD---------LVGRLVGLEAEGLFRLVVGFL 511          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.420e-25
Identity = 174/429 (40.56%), Postives = 234/429 (54.55%), Query Frame = 1
Query:    1 IKLFDLVCAGASPRQWSDWLRPPLEHAAAAGEVDLLKMLIRAGARRWTALHYAASGGHETMVRVLMFAGANVSCTDMHENTPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLR---CGTYSRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDMLVIEGGADIEATTSDRNAPIFIAA--QENNCNALRVILQHKANVEVQNEYGVRPLATASRYLAEGT---VELLLRSGADETHVDNEGRSARDIVGKGVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRV-DGNQGVGDAESQSAFGRHVAKFARTVKIEVQRAPADSGGEKCMMRGDIADEGSRDISSSVEARVIKLEQEGVFRRILGFL 1260
            +++ DLV A ++P +W+ WL+ PLE A   G+ DL  ML+R GA   TA++ A + G   ++ +L+  GA+VS TD         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LR    G + R+                       V+AG+     V +LH A  F++  AV +L +E GADI+  +  R+ P+ +A+  Q +  +A+                       AS    +G+   V+LLLR GADET  D  G+   D VG  +   +     + +  V  LLA+AP DRAWRRRG+LVLCRA+  +  LR  DG    G    ++   R  AK AR+          D+ G  C  R    + G+ D   S   RV++LE+EG+FR ++GFL
Sbjct:   14 LRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAH-RSXXXXXXXXXXXXXXXXXXXXXXXVNAGD--NLFVPALHLAVAFNKVKAVKVL-LEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVL-VHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRT---RSRAKLARS----------DAVGAGC--RRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 9.330e-25
Identity = 94/289 (32.53%), Postives = 140/289 (48.44%), Query Frame = 1
Query:  430 TYSRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDMLVIEGGADIEATTSDRNAPIFIAAQENNCNALRVILQHKANVEVQNEY-GVRPLATASRYLAEGTVELLLRSGADETHVDNEGRSARDIVGKGVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRVDGNQGVGDAESQSAFGRHVAKFARTVKIEVQRAPADSGGEKCMMRGDIADEGSRDISSSVE-----------ARVIKLEQEGVFRRILGFL 1260
            T   T L  A  + HV ++ AL+  G DV+        V   H AA  +  AA+  L  + G  IE  +     P+  AA   +C A+  +LQ  ANV  +N   G+ PL +A R       +LLLR GADET VD++ ++   ++   +  A    R+  + RV  LLA AP DRAWRRRG LV C + PD+V L V+  +   +A  Q+       + ART ++EV+    +  G            G+R+ + S+            A +I L +E +FR+I+GFL
Sbjct:   56 TREETHLLLAVKRNHVAIINALLAEGADVNFLT-TRRPVPLAHIAALHNNAAAMPAL-FKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQR-LERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQ--ERPRRHARTGQVEVK---VEMDGTNXXXXXXXXKSGAREGTESMREGTDGGFNGLSAWMIALTEEHLFRKIMGFL 336          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 6.680e-24
Identity = 129/502 (25.70%), Postives = 194/502 (38.65%), Query Frame = 1
Query:    1 IKLFDLVCAGASPRQWSDWLRPPLEHAAAAGEVDLLKMLIRAGA---RRW------------------------------------------TALHYAASGGHETMVRVLMFAGANVSCTDMHENT-PLL-------------LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLRCGTY-------SRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDMLVIEGGADIEATTS--DRNAPIFIAAQENNCNALRVILQHKANVEVQNEYGVRPLATASR---YLAEGTVELLLRSGADETHVDNEGRSARDIV---------GKGVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRVDGNQGVGDAESQSAFGRHVAKFARTVKIEVQRAPADSG--GEKCMMRGDIADEGSRDISSSVEARVIKLEQEGVFRRILGFL 1260
            +++F +V  GA+P QW+ WLR PLEHAAA+G ++L+  L++AG      W                                          +AL+ +  G HE   R L+ AGA+V+  D  +   PL              L                                                    V L  G         S +AL  AA    + VM+AL++HGVDV+ G   E     LH+AA F+    + +L ++ GADI+   S  D    +  AA+  N  AL  +L+  ANV    + G   L   S    +  + TV++LLR GA E  VD  G++  D+           + +  +E P+ E    R   LLA AP DR WRRR  L++ R   +K      G +  G        G  +    R     V+R+    G  G +  +  D+           + + ++ LE +GVFR ILG++
Sbjct:   13 VEIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVNVG---EDHWNPLHWAAQFNSTGCITVL-LDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELE----RAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGE-GLLLGDGKRGGSNNVRRSGRSRGRGGGRAAVEVDLR---------GLVSVLVCLESDGVFRTILGYI 496          
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 7.960e-22
Identity = 146/346 (42.20%), Postives = 196/346 (56.65%), Query Frame = 1
Query:    4 KLFDLVCAGASPRQWSDWLRPPLEHAAAAGEVDLLKMLIRAGAR-RWTALHYAASGGHETMVRVLMFAGANVSCTDMHENTPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLRCGTYSRTALEEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDMLVIEGGADIEATTSDRNAPIFIAAQENNCNALRVILQHKANVEVQNEYGVRPLATASRYLAE--GTVE---LLLRSGADETHVDNEGRSARDIVGKGVSSAERPDREDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRVD 1023
            ++ DL+     P + S+WL  PLE A A G+  L + L++AGA+    ALH A   GH  +  +L+  GA+V   +    TP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ +R   +  + L+ AA    V ++R LI HG++V+         T+LH+AA  ++  A+D+LV   GADI+A     + P+                                       + +  G+V+   LLLR GADET V  +G++A D +G     +  P  ++   R + LL  AP DRAWRRRG+LVLC A+PD++ L  D
Sbjct:   25 RVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFG---TALHWAAKANRANAIDVLV-GAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDE---RARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLGGD 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4423.11186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKL4_ECTSI1.110e-4148.56Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KNU3_9PHAE5.190e-3239.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI2.160e-3043.00Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JU78_9PHAE2.910e-2929.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXK5_9PHAE9.010e-2839.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQN0_ECTSI8.600e-2735.62Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
D7FYD0_ECTSI1.420e-2540.56Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KFY7_9PHAE9.330e-2532.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXA8_ECTSI6.680e-2425.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G137_ECTSI7.960e-2242.20Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4423contigH-paniculata_contig4423:10018..11415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score163.7
Seed ortholog evalue1.9e-37
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size1263
Cds size1263
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930334.4534287-CDS-H-paniculata_contig4423:10017..111451622930334.4534287-CDS-H-paniculata_contig4423:10017..11145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4423 10018..11145 -
1691481246.3593783-CDS-H-paniculata_contig4423:10017..111451691481246.3593783-CDS-H-paniculata_contig4423:10017..11145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4423 10018..11145 -
1622930334.4761007-CDS-H-paniculata_contig4423:11280..114151622930334.4761007-CDS-H-paniculata_contig4423:11280..11415Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4423 11281..11415 -
1691481246.372521-CDS-H-paniculata_contig4423:11280..114151691481246.372521-CDS-H-paniculata_contig4423:11280..11415Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4423 11281..11415 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4423.11186.1prot_H-paniculata_contig4423.11186.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4423 10018..11415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4423.11186.1

>prot_H-paniculata_contig4423.11186.1 ID=prot_H-paniculata_contig4423.11186.1|Name=mRNA_H-paniculata_contig4423.11186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp
IKLFDLVCAGASPRQWSDWLRPPLEHAAAAGEVDLLKMLIRAGARRWTAL
HYAASGGHETMVRVLMFAGANVSCTDMHENTPLLLAAQRGHGKIASDLAL
GGADVNKLNQQRLSPLSLAAVNGNVPTTEALLTAGADVDLRCGTYSRTAL
EEAACKGHVGVMRALIQHGVDVSAGNPNEHGVTSLHYAAYFDQPAAVDML
VIEGGADIEATTSDRNAPIFIAAQENNCNALRVILQHKANVEVQNEYGVR
PLATASRYLAEGTVELLLRSGADETHVDNEGRSARDIVGKGVSSAERPDR
EDGMNRVQRLLAHAPMDRAWRRRGMLVLCRAFPDKVNLRVDGNQGVGDAE
SQSAFGRHVAKFARTVKIEVQRAPADSGGEKCMMRGDIADEGSRDISSSV
EARVIKLEQEGVFRRILGFL*
back to top

mRNA from alignment at H-paniculata_contig4423:10018..11415-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4423.11186.1 ID=mRNA_H-paniculata_contig4423.11186.1|Name=mRNA_H-paniculata_contig4423.11186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig4423:10018..11415- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCAAACTGTTTGATCTTGTCTGCGCAGGAGCTTCTCCAAGACAATGGTC GGACTGGCTCAGACCGCCCCTCGAACATGCTGCAGCGGCCGGTGAGGTAG ACCTCCTAAAGATGCTGATAAGAGCGGGGGCGAGAGTTGAAGCGAACTGG AAAGGATGCCGTGGTCGTACGCTGCTTCATGCGGCTGCACAAGGCGGGAA GCACGAGATCATCTCGTCCTTGCTCAAAGCTGGTGCCAAATCCGCGGTCA ATGCACAGCATCATAAAAAGAGGTGGACAGCTCTGCACTATGCGGCATCC GGTGGTCATGAAACCATGGTAAGGGTGTTGATGTTTGCTGGGGCCAATGT ATCTTGCACCGATATGCACGAGAACACTCCCTTGCTCCTGGCGGCTCAGA GGGGACACGGGAAAATTGCGAGTGACCTGGCACTCGGCGGAGCAGACGTG AACAAACTGAACCAGCAACGCCTGTCACCCCTCTCTCTTGCCGCCGTGAA CGGTAACGTGCCTACGACAGAAGCTCTCTTGACTGCCGGAGCGGATGTCG ACTTGCGCTGTGGTACATACTCCAGGACAGCACTGGAAGAAGCAGCTTGC AAGGGACATGTGGGTGTCATGAGAGCTCTAATCCAGCACGGTGTGGACGT TTCTGCGGGTAACCCCAATGAACACGGTGTGACATCTTTACATTACGCCG CATATTTTGACCAGCCAGCTGCGGTCGATATGCTTGTCATAGAGGGCGGT GCCGACATCGAGGCAACGACAAGCGACAGGAACGCGCCAATCTTTATTGC CGCCCAAGAAAACAACTGCAACGCGTTACGTGTTATATTACAGCACAAGG CAAATGTAGAGGTCCAGAACGAATATGGAGTTAGGCCGTTAGCCACGGCC TCCCGATATTTGGCCGAGGGGACGGTTGAGCTCCTCTTGAGATCGGGAGC AGATGAGACGCATGTGGACAACGAAGGTCGGTCGGCCAGGGACATTGTCG GAAAAGGGGTCTCATCGGCCGAGAGACCCGATAGAGAAGACGGAATGAAC CGGGTGCAAAGGCTGTTAGCTCACGCCCCCATGGACAGGGCATGGCGTCG GCGGGGTATGCTGGTCTTATGTCGCGCCTTTCCGGACAAGGTGAATCTCA GAGTGGACGGCAACCAGGGGGTTGGTGATGCGGAGTCACAATCGGCATTT GGCAGGCATGTGGCAAAATTCGCTAGGACGGTAAAGATCGAAGTGCAGAG GGCTCCCGCTGACAGTGGGGGAGAGAAGTGTATGATGAGAGGCGATATTG CAGACGAGGGTAGTCGTGACATCAGCAGCAGTGTGGAGGCGAGGGTGATA AAACTGGAGCAGGAGGGCGTGTTCCGTAGGATCCTTGGTTTTTTATAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4423:10018..11415-

>mRNA_H-paniculata_contig4423.11186.1 ID=mRNA_H-paniculata_contig4423.11186.1|Name=mRNA_H-paniculata_contig4423.11186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at H-paniculata_contig4423:10018..11415- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCAAACTGTTTGATCTTGTCTGCGCAGGAGCTTCTCCAAGACAATGGTC
GGACTGGCTCAGACCGCCCCTCGAACATGCTGCAGCGGCCGGTGAGGTAG
ACCTCCTAAAGATGCTGATAAGAGCGGGGGCGAGAATCAAACTGTTTGAT
CTTGTCTGCGCAGGAGCTTCTCCAAGACAATGGTCGGACTGGCTCAGACC
GCCCCTCGAACATGCTGCAGCGGCCGGTGAGGTAGACCTCCTAAAGATGC
TGATAAGAGCGGGGGCGAGAAGGTGGACAGCTCTGCACTATGCGGCATCC
GGTGGTCATGAAACCATGGTAAGGGTGTTGATGTTTGCTGGGGCCAATGT
ATCTTGCACCGATATGCACGAGAACACTCCCTTGCTCCTGGCGGCTCAGA
GGGGACACGGGAAAATTGCGAGTGACCTGGCACTCGGCGGAGCAGACGTG
AACAAACTGAACCAGCAACGCCTGTCACCCCTCTCTCTTGCCGCCGTGAA
CGGTAACGTGCCTACGACAGAAGCTCTCTTGACTGCCGGAGCGGATGTCG
ACTTGCGCTGTGGTACATACTCCAGGACAGCACTGGAAGAAGCAGCTTGC
AAGGGACATGTGGGTGTCATGAGAGCTCTAATCCAGCACGGTGTGGACGT
TTCTGCGGGTAACCCCAATGAACACGGTGTGACATCTTTACATTACGCCG
CATATTTTGACCAGCCAGCTGCGGTCGATATGCTTGTCATAGAGGGCGGT
GCCGACATCGAGGCAACGACAAGCGACAGGAACGCGCCAATCTTTATTGC
CGCCCAAGAAAACAACTGCAACGCGTTACGTGTTATATTACAGCACAAGG
CAAATGTAGAGGTCCAGAACGAATATGGAGTTAGGCCGTTAGCCACGGCC
TCCCGATATTTGGCCGAGGGGACGGTTGAGCTCCTCTTGAGATCGGGAGC
AGATGAGACGCATGTGGACAACGAAGGTCGGTCGGCCAGGGACATTGTCG
GAAAAGGGGTCTCATCGGCCGAGAGACCCGATAGAGAAGACGGAATGAAC
CGGGTGCAAAGGCTGTTAGCTCACGCCCCCATGGACAGGGCATGGCGTCG
GCGGGGTATGCTGGTCTTATGTCGCGCCTTTCCGGACAAGGTGAATCTCA
GAGTGGACGGCAACCAGGGGGTTGGTGATGCGGAGTCACAATCGGCATTT
GGCAGGCATGTGGCAAAATTCGCTAGGACGGTAAAGATCGAAGTGCAGAG
GGCTCCCGCTGACAGTGGGGGAGAGAAGTGTATGATGAGAGGCGATATTG
CAGACGAGGGTAGTCGTGACATCAGCAGCAGTGTGGAGGCGAGGGTGATA
AAACTGGAGCAGGAGGGCGTGTTCCGTAGGATCCTTGGTTTTTTATAGAG
GTGGACAGCTCTGCACTATGCGGCATCCGGTGGTCATGAAACCATGGTAA
GGGTGTTGATGTTTGCTGGGGCCAATGTATCTTGCACCGATATGCACGAG
AACACTCCCTTGCTCCTGGCGGCTCAGAGGGGACACGGGAAAATTGCGAG
TGACCTGGCACTCGGCGGAGCAGACGTGAACAAACTGAACCAGCAACGCC
TGTCACCCCTCTCTCTTGCCGCCGTGAACGGTAACGTGCCTACGACAGAA
GCTCTCTTGACTGCCGGAGCGGATGTCGACTTGCGCTGTGGTACATACTC
CAGGACAGCACTGGAAGAAGCAGCTTGCAAGGGACATGTGGGTGTCATGA
GAGCTCTAATCCAGCACGGTGTGGACGTTTCTGCGGGTAACCCCAATGAA
CACGGTGTGACATCTTTACATTACGCCGCATATTTTGACCAGCCAGCTGC
GGTCGATATGCTTGTCATAGAGGGCGGTGCCGACATCGAGGCAACGACAA
GCGACAGGAACGCGCCAATCTTTATTGCCGCCCAAGAAAACAACTGCAAC
GCGTTACGTGTTATATTACAGCACAAGGCAAATGTAGAGGTCCAGAACGA
ATATGGAGTTAGGCCGTTAGCCACGGCCTCCCGATATTTGGCCGAGGGGA
CGGTTGAGCTCCTCTTGAGATCGGGAGCAGATGAGACGCATGTGGACAAC
GAAGGTCGGTCGGCCAGGGACATTGTCGGAAAAGGGGTCTCATCGGCCGA
GAGACCCGATAGAGAAGACGGAATGAACCGGGTGCAAAGGCTGTTAGCTC
ACGCCCCCATGGACAGGGCATGGCGTCGGCGGGGTATGCTGGTCTTATGT
CGCGCCTTTCCGGACAAGGTGAATCTCAGAGTGGACGGCAACCAGGGGGT
TGGTGATGCGGAGTCACAATCGGCATTTGGCAGGCATGTGGCAAAATTCG
CTAGGACGGTAAAGATCGAAGTGCAGAGGGCTCCCGCTGACAGTGGGGGA
GAGAAGTGTATGATGAGAGGCGATATTGCAGACGAGGGTAGTCGTGACAT
CAGCAGCAGTGTGGAGGCGAGGGTGATAAAACTGGAGCAGGAGGGCGTGT
TCCGTAGGATCCTTGGTTTTTTATAG
back to top