prot_H-paniculata_contig4423.11184.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4423.11184.1
Unique Nameprot_H-paniculata_contig4423.11184.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length542
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4423.11184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..542
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..40
score: 0.771
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4423contigH-paniculata_contig4423:1274..3211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4423.11184.1mRNA_H-paniculata_contig4423.11184.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4423 1170..3211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4423.11184.1 ID=prot_H-paniculata_contig4423.11184.1|Name=mRNA_H-paniculata_contig4423.11184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=542bp
MRRDMGASRRRCGNAGTGPLLAHAAVAFVLLLLTAGTANAFDDPDLAAAL
AAATAAAAGEDNVATATVAREDKSGVLEEDAGSPDLDSVTLGVSSVNPQA
GAVRPEHEGIARSNQGSEENDAQSSSLSSSNKGMISGDASVVTSRPSDES
VEHSTNERVAFETANVVRADGNNHKMGEPHDRAGSESMRLKDETREDTLS
AGQERKDLDGELLSDKGIQQIETTEGEGRGSGKKHEGGMTEEAGQSEPAG
LPGAVEGDKGLTFHLESTTMMEDAVVDETEDSISESVAAAAAVVDTATSG
MVRVIHYISESRDVVEDGKEETVTLKAADVAEVKRPLDNDSPAAKAAGSS
VDDYQLNGEKAAKEEVVIDAKLVSVARISDSSVDSLALAGERNMAAGVVG
DALQPARNAGQKHQQQPQSLTQTVLDHEGEGNKSKNDSEPLSSSDLDREH
TNQATGDRAGDPGNFESKQQVLLHGNDPRSAATATDIDHIAAHASENART
VVEKPALDGSADPRSYTKNEERQEHQVPTAVPGVGSDGVSRR
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