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Homology
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: D7FKQ1_ECTSI (Protein tyrosine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ1_ECTSI) HSP 1 Score: 308 bits (790), Expect = 1.330e-96 Identity = 158/209 (75.60%), Postives = 176/209 (84.21%), Query Frame = 1
Query: 685 MVSRTVDSS-PGGVPSGKTRASSSNSTLTFARVGTVSMSTQPSLIEWRKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSRGQGCSSCVIM 1308
MVSR DSS PGG S TR + +N+ L +MS PSL+EW+KLRFVIMDAPKANNLHLY+RELKK NVVCVVRVCEPTY ASEVEAAG++LLEMEYDDG APP EII++WL V+ TF +APDSSGPNGSEGP IAVHCVAGLGRAPVLVAIALIEYG+DPIKAVEYIR +RRGAINR QL+YLD+YERRS G GCSSCV+M
Sbjct: 1 MVSRGADSSGPGGGSS--TRTAPTNTALGRVEAA-ATMSAHPSLVEWKKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGIKLLEMEYDDGGAPPVEIINKWLDVVQTTFHNAPDSSGPNGSEGPTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSYERRSSGNGCSSCVVM 206
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: A0A6H5KJ35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ35_9PHAE) HSP 1 Score: 299 bits (766), Expect = 6.730e-93 Identity = 143/172 (83.14%), Postives = 156/172 (90.70%), Query Frame = 1
Query: 793 MSTQPSLIEWRKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSRGQGCSSCVIM 1308
MS PSL+EW+KLRFVIMDAPKANNLHLY+RELKK NVVCVVRVCEPTY ASEVEAAGM+LLEMEYDDG APP EII++WL V+ TF +APDSSGPNGSEGP IAVHCVAGLGRAPVLVAIALIEYG+DPIKAVEYIR +RRGAINR QL+YLD+YERRS G CSSCV+M
Sbjct: 46 MSAHPSLVEWKKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPVEIINKWLNVVKTTFHNAPDSSGPNGSEGPTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSYERRSSGNSCSSCVVM 217
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: A0A835YN25_9STRA (Protein tyrosine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN25_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.230e-55 Identity = 105/176 (59.66%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 790 SMSTQPSLIEW-----RKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEG-----------PAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYER 1269
S++T+PSL+EW RKL F+IMDAPKA+NL +YL+E KKHNVV +VRVCE TY A EVE AG+ + EMEYDDG APPPEII WL V TF+ S+ + G P +AVHCVAGLGRAPVLVAIALIE G + +AVEYIR++RRGAINR QL+YL+ Y+R
Sbjct: 8 SLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQR 183
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: A0A835ZE75_9STRA (Protein tyrosine phosphatase type IVA protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE75_9STRA) HSP 1 Score: 194 bits (493), Expect = 6.780e-54 Identity = 109/184 (59.24%), Postives = 127/184 (69.02%), Query Frame = 1
Query: 778 VGTVSMSTQPSLIEW-----RKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLT-FQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYE-RRSRGQGCSSCVIM 1308
V S++T+PSLIEW RKL F+IMDAPKA+NL LYL+E K+HNVV +VRVCE TY A EV AG+ + MEY DG APP EII++WL V +T P IAVHCVAGLGRAPVLVAIALIE G DPI AVEYIR +RRGAINR QLTYL+ Y R R +G +C +M
Sbjct: 4 VHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVTGXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHRRRG--TCAVM 185
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: A0A7S3GSY3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSY3_9STRA) HSP 1 Score: 189 bits (480), Expect = 2.900e-52 Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 1
Query: 790 SMSTQPSLIEWRKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSRGQGCSSCVIM 1308
S+ +PSLIEW LR +IMDAPK +NLHLYL++ KK NV +VR+ EP+Y EVE +G+ L EM Y DG +PPP++I RWL + TF D+ GP+ E P IA+HCVAGLGRAPVLVAIALIEYG D I AV +IR +RRGAIN QL YL++Y+ R +G C IM
Sbjct: 6 SLVNKPSLIEWGPLRLLIMDAPKDSNLHLYLKQCKKSNVTSIVRISEPSYSREEVEKSGIALHEMYYPDGHSPPPDVIARWLTVLADTF----DNKGPD--ETPCIAIHCVAGLGRAPVLVAIALIEYGMDAISAVTFIRERRRGAINTVQLNYLESYK-PMRKKGDKKCTIM 171
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: H3GU63_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GU63_PHYRM) HSP 1 Score: 187 bits (474), Expect = 1.890e-51 Identity = 98/174 (56.32%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 787 VSMSTQPSLIEWRKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSRGQGCSSCVIM 1308
++ + +P++++W L FVIMDAP +NLH+YL+ELKKHNV +VR CE TY + VEAAG+ + E+E+ DG +P PEI+ +WL V F+D + N S IAVHCVAGLGRAPVLVAIALIEYG DPI AVE+IR RRGAIN QL YL+ Y+ R RG + CVIM
Sbjct: 2 IAPTNKPTMVKWEHLSFVIMDAPNDSNLHIYLKELKKHNVTDLVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLVEECFKDNSIDAKNNKS----IAVHCVAGLGRAPVLVAIALIEYGLDPINAVEHIRKFRRGAINLRQLKYLEKYQPR-RGNK-AKCVIM 169
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: A0A8K1FCX2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCX2_PYTOL) HSP 1 Score: 186 bits (473), Expect = 2.610e-51 Identity = 101/174 (58.05%), Postives = 123/174 (70.69%), Query Frame = 1
Query: 787 VSMSTQPSLIEWRKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSRGQGCSSCVIM 1308
++ + +P+L++W +L FVIMDAP +NLHLYL+ELKK+NV +VR CE TY VEAAG+++ EME+ DG P EI+ +WL V TF+D S N S IAVHCVAGLGRAPVLVAIALIE+G DPI AVE+IR RRGAIN QL YL+ YE SRG S C IM
Sbjct: 2 IAQTNKPTLVQWEELSFVIMDAPNNSNLHLYLKELKKYNVTELVRACEVTYGREGVEAAGIRVHEMEFPDGEPPDAEILDKWLDLVSETFKDNKAGSRSNKS----IAVHCVAGLGRAPVLVAIALIEHGLDPINAVEHIRKHRRGAINLRQLKYLEKYE-PSRGHK-SKCSIM 169
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: A0A484DZE8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZE8_BRELC) HSP 1 Score: 185 bits (469), Expect = 9.470e-51 Identity = 96/174 (55.17%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 787 VSMSTQPSLIEWRKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSRGQGCSSCVIM 1308
++ + +P++++W L FVIMDAP +NLH+YL+ELKKHNV +VR CE TY + V+AAG+ + E+E+ DG +P P+I+ +WL V + ++D SS N S IAVHCVAGLGRAPVLVAIALIEYG DPI AVE+IR RRGAIN QL YL+ Y+ R RG + C IM
Sbjct: 2 IAPTNKPTMVKWEHLFFVIMDAPTDSNLHVYLKELKKHNVTDLVRACEVTYSSESVKAAGIHVHELEFPDGESPDPKILDQWLDLVEICYKDNVCSSNKNRS----IAVHCVAGLGRAPVLVAIALIEYGLDPINAVEHIRKFRRGAINLRQLKYLEKYQPR-RGSK-AKCTIM 169
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: A0A0P1AB79_PLAHL (Protein tyrosine phosphatase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB79_PLAHL) HSP 1 Score: 183 bits (465), Expect = 3.430e-50 Identity = 97/174 (55.75%), Postives = 122/174 (70.11%), Query Frame = 1
Query: 787 VSMSTQPSLIEWRKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSRGQGCSSCVIM 1308
++ + +P+L++W L FVIMDAP +NLH+YL+ELKK+NV +VR CE TY VEAAG+ + E+E+ DG +P P+I+ WL V F+D +S N S IAVHCVAGLGRAPVLVAIALIEYG DPI AVE+IR RRGAIN QL YL+ Y+ R RG + C IM
Sbjct: 2 IAPTNKPTLVKWEHLSFVIMDAPNDSNLHIYLKELKKYNVSDLVRACEVTYSREAVEAAGIHVHELEFPDGESPDPDILDMWLDLVENCFKDNVSNSNSNRS----IAVHCVAGLGRAPVLVAIALIEYGLDPINAVEHIRKFRRGAINLRQLKYLEKYQPR-RGNK-AKCTIM 169
BLAST of mRNA_H-paniculata_contig4422.11183.1 vs. uniprot
Match: A0A7S2V9P7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9P7_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.890e-49 Identity = 99/180 (55.00%), Postives = 128/180 (71.11%), Query Frame = 1
Query: 793 MSTQPSLIEWRKLRFVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQA-SEVEAAGMQLLEMEYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLGRAPVLVAIALIEY-GEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSR------GQGCSSCVIM 1308
+ T+P+L+E +RF+IMDAP+ NL Y+RE+K+HNV VVRVCEPTY A +E+ AG+ L EMEY DG +P ++I WL+ V TF +S P+G GPAIAVHCVAGLGRAPV+VAIALIE+ G DPI+AV ++RS+RRGAIN QL YL Y+R + G GC+ C I+
Sbjct: 58 IGTKPTLVEKAPMRFLIMDAPRQANLPFYIREMKRHNVTNVVRVCEPTYIAGTELSTAGICLHEMEYKDGTSPSSDLIMAWLRIVESTFYS--NSGQPSGDSGPAIAVHCVAGLGRAPVMVAIALIEFAGMDPIEAVSFLRSKRRGAINEKQLLYLSGYKRMHKKSSAAAGGGCA-CKIL 234
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 187.2 |
| Seed ortholog evalue | 7.8e-45 |
| Seed eggNOG ortholog | 164328.Phyra80741 |
| Preferred name | PTP4A2 |
| KEGG ko | ko:K01104,ko:K18041 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000323,GO:0001667,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0004727,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005768,GO:0005769,GO:0005773,GO:0005783,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0006355,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0008015,GO:0008138,GO:0008150,GO:0008152,GO:0009889,GO:0009898,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010631,GO:0010646,GO:0010647,GO:0012505,GO:0015630,GO:0016020,GO:0016311,GO:0016477,GO:0016787,GO:0016788,GO:0016791,GO:0018995,GO:0019219,GO:0019222,GO:0019538,GO:0020016,GO:0020023,GO:0023051,GO:0023052,GO:0023056,GO:0030334,GO:0030335,GO:0030430,GO:0031323,GO:0031326,GO:0031410,GO:0031910,GO:0031982,GO:0032501,GO:0032879,GO:0032880,GO:0033643,GO:0033646,GO:0034097,GO:0035335,GO:0036211,GO:0040011,GO:0040012,GO:0040017,GO:0042221,GO:0042578,GO:0042995,GO:0043114,GO:0043117,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043230,GO:0043231,GO:0043232,GO:0043412,GO:0043542,GO:0043656,GO:0043657,GO:0043687,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048870,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051252,GO:0051270,GO:0051272,GO:0051674,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0070062,GO:0070201,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071944,GO:0080090,GO:0090130,GO:0090132,GO:0090287,GO:0097708,GO:0098552,GO:0098562,GO:0120025,GO:0120038,GO:0140096,GO:1900746,GO:1901222,GO:1901224,GO:1901564,GO:1902531,GO:1902533,GO:1902547,GO:1903506,GO:1903561,GO:1904951,GO:1990823,GO:1990830,GO:2000112,GO:2000145,GO:2000147,GO:2001141 |
| EggNOG free text desc. | protein tyrosine phosphatase activity |
| EggNOG OGs | 3QAQB@4776,KOG2836@1,KOG2836@2759 |
| Ec32 ortholog description | protein tyrosine phosphatase |
| Ec32 ortholog | Ec-21_001700.1 |
| EC | 3.1.3.48 |
| COG Functional cat. | T |
| Best tax level | Peronosporales |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01009 |
| Exons | 5 |
| Model size | 2437 |
| Cds size | 627 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4422.11183.1 >prot_H-paniculata_contig4422.11183.1 ID=prot_H-paniculata_contig4422.11183.1|Name=mRNA_H-paniculata_contig4422.11183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp
MVSRTVDSSPGGVPSGKTRASSSNSTLTFARVGTVSMSTQPSLIEWRKLR
FVIMDAPKANNLHLYLRELKKHNVVCVVRVCEPTYQASEVEAAGMQLLEM
EYDDGAAPPPEIIHRWLKAVRLTFQDAPDSSGPNGSEGPAIAVHCVAGLG
RAPVLVAIALIEYGEDPIKAVEYIRSQRRGAINRHQLTYLDNYERRSRGQ
GCSSCVIM* back to topmRNA from alignment at H-paniculata_contig4422:5945..14987- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4422.11183.1 ID=mRNA_H-paniculata_contig4422.11183.1|Name=mRNA_H-paniculata_contig4422.11183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9043bp|location=Sequence derived from alignment at H-paniculata_contig4422:5945..14987- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGAGGTACTCTTGGCCTGCGGGCATTCCGTACGAAAACACGTCCACCTG
TTCGCTCGACCTTCTTCTACTTCTCGTTTTTAGGCAACGACATTAACTTC
ACATACATGGGACGAGTCACGGCAAAGTCGGCGTTGAGAAAAACCGCGCC
ATCCTCGTTCATCTTTGAGAACACCACTGTCGACGAGCCGGGCTAGGACA
GGATTGAATTCCTAAAAGATTGGTGTGTGCGTTCCGCCCACAGCAAGCAG
CAGCAAGAGCGCCCTTCAGCTTTGGTTTAGCTATAATAATTTACATATCA
CCGTAGTCTATTCACATTTACACACATATATACCATACACACTTGTAGTC
ACGGAGTGCCACTGTATTAGAGCGTACCGCAGCTTTTGAGGAACCGGGGT
GGAACATCATCACGGCAGTTGGACTGTAATTGGAGTGCTTCCGTCGCAGG
GCTCGTTGTGCTTCTCGTTGGGTTTTTCTGGGCCGAAGGTGAGCAACAAC
TGTCTTTTTCTTTGTTTCTCTTTCAAGTACTGTCTGTACTTGTATTTAAT
TGTCGTCTATCTTCTTTTTTTTGTTTCTCTTGCCAGCATCTGCTGCTGCC
TCCTTGCTGCTCGGTACTTCATTCCACATGTTTATAAATGTGCATTTTTG
TTAATCTGATGGAATAAACTTGCTCCTTGGTTTTGGACAACCCCGTCAGG
GGCTGCTGAGTCTGTGGAGTAGTCGGAGATGATGTGCAAAATCACTCGGC
AAGGAAGCTCGTATCTAGCTCACAACTGTTAGCTTCCTTTTCTCTTAGTT
TGCAGACTGGTATTGTGGTTTTGTGCTGGCGCTTCCTTTTGACCTCGCAA
ATACGCCGCGCGATCACCAACTCTTGTGTATTTGTACTTTGGCTTTCAAC
CGCTGCAAAAATTGTTTTTTCTCACACAGGATCGCATCGTTTGGTAGTCA
CAAGACAGTACAACACACCGGCAGTACAGTACTTGATTGTGGAGATTGGT
GCCGTCACACAGCGGACATTGACACCACCATTATACTGATTGTGAGGAGG
CCGTGATATTACCGTGGCGGGTTCTGTGCTGACTGGGGTTGGGGTGGCCC
TTGTCTACTCTGCTGCGTTGGTTGGATGGTGAGCCGTACGGTTGACAGCT
CGCCGGGCGGCGTGCCTTCGGGCAAGACCAGGTGAGGGTTTTCCGTTTTC
TGTTCTCTGTTTCATCCAATGGATTAAAGCTCTTCATGTTTCTCCATCCC
TTACGGGGCGCAGGCAGTGCACTTGACTTGAACGAGCGTCGATTGCACGA
GTCTAATGTCGAACGTGTGAATGTATGTTGTCATTACGGCGACGATTGGA
CCTGTTGACGTCGATCCAAACTGAATACTTACTACCTTCTGTACTGTGGG
CACATCGTGAGTACTTACTGACTGTCTGTCACTGTCTGTGTCGTTTGTCA
CTGTAGTACCGAAACATGTTGTTGAAAGTGGTTAGTAAATAGGGCTAGTC
TTGGTTCCGCTGTGTGTGACGTCTATCTCTACCATATACTATTAAATGTA
TAGGTATGTTCGAATCTCCAAGAGGACGGATTGGCCGAAAGTTTGCTCCA
ACACCCCGCGTTGTCTTTTCTCCACGAAACTGCATGTTCTGAGCTAAACA
CGAAATCTGTGGCCAAAGTGCTGTGCTTGTCAATCCAACATTAATTAGCT
TTTTTGGGGTCATGTGGTGATTGGCGTCGCTAATATATGTACAGTGCAAA
ACATTACATGAGTTCATATGATATACAAACGTGTGCAGACCCAGCTCTAC
AATAATCAGTCCGGTGACTCTTGACAACCATGTTATGTTCGTATTTGCGC
TGTGTTATGTCGCGTGACAATAAGGTATAGTTGGTGACTGTTCTGAAAAA
AGTGGGAAGTTGTATCGTCGGACGAGCCGAGGTTGCTTGCCTAGATTGTT
GAATGCTGAATTGGTTGTTGGTTCTGGTGCTGTGCTGTATCTAACATTTG
TTGTTGGTACTCGTGATTGTTTTGTTCAGCATGCTCCCACCGACTGTGCA
AGTATAAGAGAAAAGAATGGCAGACTGGTTCTTGTATGTCTCTCTTGTGT
TGCCGTTCGGTTTTTCGCTTGCCGCACTTCATCGTTTCGTCATCGCTATG
GCTACTAACAACGCGGTGTGAAGTGGGGTGGTTGGTTTCTGCACACACGT
TCAACTATTGGGCCGTTGACACAAGACTCAAATCGCAGATACAGTCACAC
CCAGAGGTATCGCGCCGTGGTGCGAACGTTTTTGAAACGCATGTTCTGTA
TCTTGAAAACTGAGATGAAAATTATTCGGTCGAATAATTAGTTGTCAGTA
GCGCCGTAGTTGTTGAGATGATGTCCTTTGAAAAGCGTTCGCACCTGGTA
CAGTAAATATCTAAACGGAAGATACAAAGCGCTGAGCTAGAGTCCGTCTT
ATGGTAGGTATTGTTAGCTGCAGTGCAGTAATGCTATTTCGAGAGGTTCA
ATAGATGTACAACGCGATTTGTACAGAAGATATCGATCCCACTAGTTTTG
TGCAGTTGACCAATTTTCAGTCGTCGTATTTCTTATCCGACCAAAATATT
CAGAAAATAAGTGTAAGATCTGAGCGAATTGGGATATGGGGTTTGCGTAT
CGGGGCTGAATTGTATAGACCATAACATCCAGGAGTGACAGTAAGATATC
GGATCCAACACCGGATCAGGAAAAACGATCGGAACGTACATTATACTATG
TTCGAGGTAGACGCACCACGTATCATTAGAAATAGGAGAGGCAGCCAGGA
ATGAGCTAAGTTGCTTTCTTCCCCCCCAACGTACATTGGAAAGCACGCAG
CACATTTGGTTTCATGTACAGGGACACGTACTGTATGTACATTTGTTTCA
TGGTTTTGTACTAGTAGTGCGATTGTCGACCTGAGGTCGGACGGGAATCG
GAGGTAGTTGGTCATAGCATTAATTGGCATTGATAAGGGATGTCTCCGTG
GGGCAGACAGGCAAGGCGCATGATGGAGGAGGATATCGGTTGCCACGACA
TTCCATGTTGCGCGTTTTCAGGTTGCATGCATTGCGGGTTTTATGAATAA
TAAATTCTAGATTCACGAGAAGAGCAAAATAGCATTTTGAATAGGTCGCA
AAGCCTATACCCACTGACGGTTACACTGCAGTATTTAGCGAGTCGCGTCC
TGTGCCATCCGGTTTAAGTCGTCACAGTACACAGTGCACAGTACTAATAA
ACTTACTTACATAACATTAATAATGTTGTATTTATTGGTCGAAGCGGCAA
AGCCACGAGTCCAACTCTCCCCCTACCCCCATTCCTGGTGAGAGGGTTTC
CCAAGAGGCACCGCCGCGTGCAGAAATAAAACGTTCAAGTCCTTTTGGCT
TCGTTCTCTCTGGAAAATAAATAAAGAAATTGAGGAGAAGTAAAGTACTA
TGAGAGTGAGGGTGTGGGCAGACTTTATTTCGAAGTAATGTATGTTTTGT
TTTAGAGAAAAACAAGAGGGTGGCTCTAACGTGCAAACAGAAAAATATCA
TCCTTATCGTCAGCGAGCCTGGCGGAAGCCTGTTTGCCCCTTAAAGATGC
AAGTGCGCCTTGAGATTGGGGGAAGCTCATACGCGTGGTCCTGCACCGCT
GCCCACGGCTGTCTTGTCTGTGCTGGTTTTGTGTACGTACTGTCATGTAT
ACATTCATGGATACTGACTGTAACATGTGGGGTAACACGTTTAACCTTTC
TAACTTCCGGTTCCAGGTTCATTCGTCCCTACAGTAATCCCTCAATACCT
CAATACCAGGGGAAAATGAGTTCTCTAACATAATTATGGAGATGGGGAGC
CGTAGCTGCTTAGATGACAAAGCGTTTACAGATAGTGCTGCAGCACAGAC
AGGTGGTTGCCATGGTTGTGCTCAGGACGGCTAATATACAGCGCTTGATG
TTTGTTCCCAAATGCCTCTCGTTTGGAAACAGTAACCTCTATCGCTAAAA
GGGTTGATGAAATTAGAAGTAAAAAAATTCCATGTCACCAATAATCGTAA
ACATGTGGTGAGCAATGGCAGTAGCAATACCCAGCGAGTCCTGAAGACGA
TCATGGCGTTCAAGGCCTTCATCGCAAGGGTACGACCGATGGATAGGCAG
ATGAGCGCGTAGTCGTACACTTGTTACTCCCGTGATGGAGGAGACAGATG
AAGGCTTGCTTGTTTGCTTGCTCTATTTGCCGTCGTGGGACCTGGATTAC
GTCTCGAATGTTTGGGTTCAACCTGTACGGGACAGGTCGAGATAAGTTCT
GAACTCGGTGAGGGATGCGAGGGCGGCACCTGGTCCAGGTCAGCGACGGG
CGGTTTGCACTAGGTAAAGACAGATGTATGTATTTCGTACAGACAAGTAG
GCGTGTCGAATATAGGCAGAATTAACAATTTTAGGTCTGCCCAAATTTGG
CCGTCTCCCACCGGCTACTCCACTGAAGATAATTAGTTATATCTTATAAC
GAATGCAACTGACAAAAAAGTGTTCCAGGGGCTCCATCTTCAAAAGCAGT
ATGACACCGTATATAGCATCTATAATAATAGTTGCGATATTGTGCAGGAA
GTGAAGGGTGATATCCAGGACACGGATGAATTGGTACATAGTACGGAATC
ACATGCCAAAAGTAACGTAATCAGTGAAGACGACGAAACCTGCAGGGTTT
ATGGTTTAGCAAGGCAAGTAAAGAAGGAACTGGGATCTACTGGCACTAGC
AGTTGACTCACTAGTTCAAGGTTGATAATCTTGTATTTCTGGTGGTGGGG
TTTATCCTGTGTCCTGAACATCTGCATGAATGGTCAATGGCCAATCACTT
GACTTTTTCAATGTCTCGAGCATGTACAAGATGTATACATTGATAGTGTA
TATATATGTACTAGGTGCTTTGTTGCATTTTGCAGGACCTCAGGCGAGGC
GTGGCATGATGGAGGGAGAATAGATGAGACCACTGGTAAGGTATCTACAT
TTGATGTGATAATCCTAGGAAACGGTGTAAACGCCACGGGGTCGATTTTT
TTTTAATTCGATTTCATTCAAAGTAAGGCCCATATACGTTCGAAAAGCAA
ACCAATCGATGAATACTGATGGAGATATTTTCAACTTCACAACTTTTGGC
GCCCATGGCACCATGGTCTGCGAGAAGAACGGTTTTGAGAAATGGTCGCT
CCGGAGCGTGTATACGTTTTCATCGCTCCCTACGAGTACACTGTCGATAA
GAAGGCAACCTGTTGAAGATAGTAATGTTGTTGGTAATAACAATTTAAAA
AAGAGTATTGGTGTGCTGTGAGATTACTACATAATTTCTTACTATTTATA
GGTGAAGCACGTGGTGAGTACTATGAGATTACCAGTATAGTTACTGACTA
TTTCCATTTCCGGGAAATTTAGTGTATAGTAAGCGTTGGCAGATAGAGAG
TATTCGGTATTGGTAGTGCGAGACAGACAAGTGCGTAATCCCAGGAAAAG
TACTGTGCTATTGTGAAAATAACGAGTGTTCGCAGAAGGTATTGGGGATA
GGAATACTCAGTATACTCCAGTGGGCGATATTCAGTAAAGTACAGAGTAT
TTTTACTGTAACGGATCGTGCGATGTGCGACCTTTAAAGAAAATGGTATG
CACGGTAGCATCGCCTTGGTATAGGGATGTGCACACGGTGATGGGCGTTT
TTTCTTCCGGGATGGACATATAGCAACAGCAGTATGAGTATAGGTAAAAG
CATACACTCGAGTAAGCTGCAGCGTTTGTTTGTACTTGATTGATATCATT
TTGCCTTTTTTTATTGAAGGCCGTGCGGAACTGAATGGGAAACACCGCGC
GATCAGACGGCCCGGGAATTATTTCGTTCACTTTTCACCACTAGCTGATG
GTGATGGGTACAGTATCCTTGGGTAAGAACAAAGAAGACACCAACAAGAA
GCCATTTCAGCCCCATAAACGCACTCAGATGGGACAAAGATACATAATCA
TGTAGGCATCGTCGCCGTCGCCTATCTGCACAAAATGATGGTGCTAATAT
TAGGTCTCGGCAATACCTCTATTTCTTTGTTTTGGGAGCAGGGCATCGTC
TTCTAATTCTACTTTGACGTTTGCCCGGGTGGGAACTGTGAGCATGTCCA
CACAGCCTTCTTTGATCGAGTGGAGGAAGCTGCGATTCGTCATTATGGAT
GCTCCTAAAGCCAACAACCTGCATCTGTATCTGAGGGAACTAAAGAAGCA
CAACGTGGTGTGTGTGGTTCGAGTCTGTGAGCCGACGTACCAGGCTTCGG
AGGTTGAGGCAGCTGGGATGCAGGTGGGCTGTGTCATGATCAGGTCAGAG
TGTATTAGAGTGCATTATTAACTGCCCGTTACAAATGCGAGCGGATCTGT
TCTGTTGTACACACGGTGTCGAAGCGCATCTCCCGCAGCGTTGTGTTGTA
CTGTATGTAATGTTGACTTTTCATTAGAGGTGCTTTTCGTAGCGCAGTCA
CTGAACGGGCAGTTATTCAAGTTTGCTGTCGATGAATGATAGAACTATGT
GTTTTCTTGTTTTCTTGACTGAGCTTGCGGATACGTTTGTTTGTTCACTG
GAACTAGGGATGCCGCGACTCGTGACAAATATTATCGCGTTTATCTTATA
CTAATTCTGATATATTTGCCTCTACAAAATCGATACTGGGAATTAAATAC
ACTAACAAGATATCCGTCCTAGTGCGGTTGACTTAACGCGCGACCGGCAT
GGCAACACCCCTGTTGGTGAAACTGGTTAACGACGGCTTGACTAATAAAC
GGAAATTTTGTGTCCAAACTGGGAAGCTCGTGCGCAGCAAATGCGTTTGA
TTTCTCTTTGCCTTGGTTTGAGCACATATAGAAATTTTTCCTTGTCTTGT
GAATGAATATTCTGTTTCAATGTTGCGACAGCTGCTGGAGATGGAGTACG
ATGACGGAGCTGCGCCTCCCCCGGAGATTATCCATAGGTGGCTGAAGGCA
GTACGACTAACATTCCAGGATGCCCCTGATAGCTCTGGGCCCAACGGCTC
GGAGGGTCCAGCTATTGCTGTGCATTGTGTGGCGGGGCTTGGTCGCGCAC
CTGTTTTAGTGGCAATCGCGCTGATCGAGTACGGGGAGGTGTGTCTTCTC
ATAAAGAGAGTTTACACCTGTGTTATACAAGGTCGATAGCTAGGACAGGG
TCGAACCGAATCTGGGAAGTTGTAAGTAGGCCTGTATGGCGTTGCAGCAA
TTGGAGTCAATTCAGACCGAAGTGCGCTGGGCAAGCTGATTCGAATATTG
GCTGGCAGGTTTCCTGTTTATTTCTACTCCCATGTATGACCAAAGAGATT
TTTCTACAGCAAGCACTCACTTCATTCCCAATAGTGGGTGCGTGTTGTGT
TAGATAGCGTGTCATTGTTTAGGTCCAATTCACCTTAAAAGCGTCTCTCG
CCTTCTTCGCCCTGTACAAAATCAGAAAATAAGCTATTGCCCACAAATTC
TCGTGAACAGCTCGAACCGGTACACAACACGTGTCGTAGCCGGAGATGAA
ACATTACAGCTACGGGGTGCCACTCTGTACTGTGTCATGTGCAATCAATG
TGGATAAACGATGGTATGTAGGAAGTACCCCTCTGAAGACATAGAAATTT
ACGTCCTTGCAACGTGCCGGTTTCCATGAGGAACGAATCTTATCCTCCCA
TTTTCGAGATTTCTGGGGGCTCGTCGAAGATTAATCGAGTAACAAACATG
CACCGCACGGTTCCTTTCCCACGTCTCACGGTCAGGATCCAATCAAAGCT
GTGGAGTACATTCGCAGCCAACGCAGGGGAGCCATCAATCGCCATCAACT
AACTTACCTGGACAACTACGAGCGACGAAGCAGGGGACAAGGGTGCTCGT
CTTGCGTGATTATGTAAAATTTTGTTGGAGTAGCCGTGTTTGACAGCAAG
TGCGGGTGGAGGTCGAAGCGTTTGGTTTTCAGTACTACGGTATATGGTGC
AAGTCCTCATTTGGATGAATCTGAAGGGGTGAGATGCAGCGATCACATGC
TTAGTAGTCAAAATACAGGAAAAAATTAATAGTACGATAGGATTGAGATG
AAGCTGCATGTGGGGGCGAAAGTTGCATAAATCACCCGTTTGCCGGTATA
GATGCCAGACTTTTTTAAGCACCAGCTAGCGCGAGACACACCCCCTTGAT
GTCTGCCGTCTGCTTCCTGTTGCCTTATCCAAGGTACCTAAATTACTTTA
ATGTTGGTGTGTGATGTTTCATGAATCCTGGTTTCGGTCTAGTGGAATTA
CTGAAATACTGTAAGCTCCATCTGCTGGTGGATTAGGTTGGATTGAGTTG
CGAGGTGTGGGCACAAGTCAATAGAGTGATTGTTTGGAAAGGTGTTTGAG
TTCAATCACGCGTCTTGGCGTGGCAGTAGTCTTTTGTCTTTTTGTATCTT
TCCGCTGGTGAAGCAAATTAATCAGTGTGTACATTAGTGGGGTGGGGATT
GCTTTGGTTCGGTCTGGTTGTGAATGTTCTCCCCTTGGGCACCTGGTACT
GATGGCGAACAGGTATTATTCGTGCTCGTTTTTGGAAAATAACCAAATCG
GTACGGAGATGGAGAAATGTTTTTGGAATATGCCGTGCACGGTACGATTG
GTCATGCAAGAAAAACCATGCACGTTGTGGGAGAGGGAAGAAGTGACATG
AGTGTGTTGTGAAGTGGCAACAGTGCCTTGTTTTGAATGTATTCATCCCC
CCTCCTGTATACCCCCCCCCTAATTCTCGCCCGTAGCTCGTATACCGTTT
GTCAGACCCTACCTGGCCTTCACTCGATAGCATGAGAACGGAGAATGGAG
CAGGCTGCTATCTGCTATGTTTGCCCTACTGTGTATGTAGCAGGGATTTG
TCTCACAGGTCGTTCGTATGGTCTGTACAGTGACGTCCACTCCTGGATAT
TGGATTATTTATGCCCGGGAGAATCCGACAGGCTTACACAAATGACCAAG
AAGCACTTGCGAGAGGACGCAGTGGACGATGTCAAAGAAACAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig4422:5945..14987- >mRNA_H-paniculata_contig4422.11183.1 ID=mRNA_H-paniculata_contig4422.11183.1|Name=mRNA_H-paniculata_contig4422.11183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at H-paniculata_contig4422:5945..14987- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGAGCCGTACGGTTGACAGCTCGCCGGGCGGCGTGCCTTCGGGCAA
GACCAGATGGTGAGCCGTACGGTTGACAGCTCGCCGGGCGGCGTGCCTTC
GGGCAAGACCAGGGCATCGTCTTCTAATTCTACTTTGACGTTTGCCCGGG
TGGGAACTGTGAGCATGTCCACACAGCCTTCTTTGATCGAGTGGAGGAAG
CTGCGATTCGTCATTATGGATGCTCCTAAAGCCAACAACCTGCATCTGTA
TCTGAGGGAACTAAAGAAGCACAACGTGGTGTGTGTGGTTCGAGTCTGTG
AGCCGACGTACCAGGCTTCGGAGGTTGAGGCAGCTGGGATGCAGGGCATC
GTCTTCTAATTCTACTTTGACGTTTGCCCGGGTGGGAACTGTGAGCATGT
CCACACAGCCTTCTTTGATCGAGTGGAGGAAGCTGCGATTCGTCATTATG
GATGCTCCTAAAGCCAACAACCTGCATCTGTATCTGAGGGAACTAAAGAA
GCACAACGTGGTGTGTGTGGTTCGAGTCTGTGAGCCGACGTACCAGGCTT
CGGAGGTTGAGGCAGCTGGGATGCAGCTGCTGGAGATGGAGTACGATGAC
GGAGCTGCGCCTCCCCCGGAGATTATCCATAGGTGGCTGAAGGCAGTACG
ACTAACATTCCAGGATGCCCCTGATAGCTCTGGGCCCAACGGCTCGGAGG
GTCCAGCTATTGCTGTGCATTGTGTGGCGGGGCTTGGTCGCGCACCTGTT
TTAGTGGCAATCGCGCTGATCGAGTACGGGGAGCTGCTGGAGATGGAGTA
CGATGACGGAGCTGCGCCTCCCCCGGAGATTATCCATAGGTGGCTGAAGG
CAGTACGACTAACATTCCAGGATGCCCCTGATAGCTCTGGGCCCAACGGC
TCGGAGGGTCCAGCTATTGCTGTGCATTGTGTGGCGGGGCTTGGTCGCGC
ACCTGTTTTAGTGGCAATCGCGCTGATCGAGTACGGGGAGGATCCAATCA
AAGCTGTGGAGTACATTCGCAGCCAACGCAGGGGAGCCATCAATCGCCAT
CAACTAACTTACCTGGACAACTACGAGCGACGAAGCAGGGGACAAGGGTG
CTCGTCTTGCGTGATTATGTAAGATCCAATCAAAGCTGTGGAGTACATTC
GCAGCCAACGCAGGGGAGCCATCAATCGCCATCAACTAACTTACCTGGAC
AACTACGAGCGACGAAGCAGGGGACAAGGGTGCTCGTCTTGCGTGATTAT
GTAA back to top
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