mRNA_H-paniculata_contig4420.11178.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4420.11178.1
Unique NamemRNA_H-paniculata_contig4420.11178.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: D7FVW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW2_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 4.570e-119
Identity = 170/203 (83.74%), Postives = 191/203 (94.09%), Query Frame = 1 
Query:    1 MTRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQPRGTIVDPDPPRPSEALAHWSHH 609
            MTRPERRAL+DKVALEKGRLMQR GQAAK+NRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQH+RKVQ+N NRRQ R++REGKRWEDMEKK+G D +RW+RLR+EG K+KKNKSGVPYNMI+LRYN+G+DGDRLEY+DN+TKHRAQ+RSNNL RLGD+RCGYNILTGQPR  IVDP  P+PS+A+A WSHH
Sbjct:    1 MTRPERRALKDKVALEKGRLMQRAGQAAKMNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHERKVQINDNRRQLRVEREGKRWEDMEKKEGDDEQRWNRLRDEGEKSKKNKSGVPYNMISLRYNDGLDGDRLEYADNVTKHRAQVRSNNLTRLGDSRCGYNILTGQPREEIVDPPVPKPSDAVALWSHH 203
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BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A835Z1N9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N9_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.270e-58
Identity = 114/214 (53.27%), Postives = 137/214 (64.02%), Query Frame = 1 
Query:    1 MTRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQPRGTIVDPDPPRP-SEAL----------AHWSHH 609
            MTR E+ A +DKVALEK RL  R G+AA+  RDNLPPEGVSLTE  P AAGFIADADRFH+D VGEE +RR A+H+R+ Q+  +RR+ +  RE  RW +M                EG KAKKN SG+PY+MI+L Y  G DG RL + D +T+HRA LRSN L RLGD R GYNI++G P     DP  PRP S+A           AHW  H
Sbjct:    1 MTRAEQLATKDKVALEKQRLFNRAGRAAREYRDNLPPEGVSLTEAHPGAAGFIADADRFHTDVVGEELVRRTAEHERRQQIVDHRRRQKQDREENRWTEMRXXXXXXXXXXXXXXXEGVKAKKNASGIPYDMISLTYRKGADGARLRHDDALTQHRAALRSNQLSRLGDGRSGYNIISGAPCAPRADP--PRPLSQAAPAXXXXXXXGAHWMAH 212
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BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A7S2XXX1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXX1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.960e-56
Identity = 102/182 (56.04%), Postives = 127/182 (69.78%), Query Frame = 1 
Query:    1 MTRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQPR 546
            +TR ER A +DKVALEK RLM R G  AK+ R+N P EGV L    PDAAGFI+DADRFHSDT GEE LRR+A+  RKV+    RR   + RE +RW+ ++     D ++W+R+RE   K+KKNKS VPYN I L+YN+G DG+RL   D  T+ RA +R  N+ R GDTRCGYNILTG+ R
Sbjct:   31 LTRAERGAQKDKVALEKARLMNRAGHQAKIYRENAPVEGVGLLGLPPDAAGFISDADRFHSDTSGEELLRRQAEQARKVEFYEKRRAKNIDREEERWQKIKDDKIADEEKWNRMREMEVKSKKNKSAVPYNAITLQYNDGHDGERLRQEDQRTRDRAHMRQQNMARHGDTRCGYNILTGEAR 212
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BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A8J2S6E6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6E6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.140e-48
Identity = 91/198 (45.96%), Postives = 133/198 (67.17%), Query Frame = 1 
Query:    1 MTRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQPRGTIVDPDPPRPSEALA 594
            MTR ERR+ RDKVALEK RLM+RTG AA+++R+N P     L     +AAGF +DADRFH+D  GEE L+R+A+++R+      +R+ R+++E +RW  ++++  Q+   W   RE G K KKNKS VPY+ + L+Y  G+DG+RL   D+  ++RA LRS NL   G++RCGY+IL G+ +  +  P+ P+P   LA
Sbjct:   21 MTRSERRSQRDKVALEKDRLMKRTGLAARMHRENAPRTSDGLVVPEANAAGFCSDADRFHTDVAGEEFLKRRARYEREQTNYATKREGRVKQEEQRWAALQEEKQQEDAYWSNQREIGVKDKKNKSSVPYDALTLQYAPGLDGERLRLHDDKIRYRAALRSRNLQTKGESRCGYDILNGRDKPDLRLPEEPQPQRELA 218
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BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A7S4ECF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECF0_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.800e-44
Identity = 90/197 (45.69%), Postives = 129/197 (65.48%), Query Frame = 1 
Query:    4 TRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQPRGTIVDPDPPRPSEALA 594
            TR ER ALRDKVALEK RLM+RTG AAK+ R+N P     L    PDAAGF+AD+DRFH+D  GE+ LRR A+  +      + R +R + E +RW  ++++   +   W   R+ G KAK+N S VP++M+ L+Y++ +DG+RL Y D+  ++RA +RS+NL++ G +R GY+ILTG     +  P  P+ S ALA
Sbjct:   40 TRQERAALRDKVALEKDRLMKRTGLAAKMYRENAPDTSDGLVVPRPDAAGFMADSDRFHTDVAGEDKLRRDAKIKQDYLRREHTRLERAKAEEQRWARIQQEKANEEANWLAERQAGIKAKRNASSVPFDMVTLQYHDSLDGERLRYHDDKVRYRAAVRSSNLLKNGGSRAGYDILTGGDVRGLQKPSYPQASGALA 236
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BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A067C5C9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5C9_SAPPC)

HSP 1 Score: 133 bits (335), Expect = 8.420e-36
Identity = 76/184 (41.30%), Postives = 119/184 (64.67%), Query Frame = 1 
Query:    4 TRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQPRGTI 555
            TR ER+A+RDK  LEK RL  R     +++       G ++T   P + GF++DADRFH+D  GEE + R+++H +   V  ++R+D   RE +RW+ M+ K  ++ +RWDRLR++G KA++NK+   YN++ L+YN+G DG+RL  +DN  +HRA +R+ NL +  ++R G N +TG P   I
Sbjct:   10 TRDERKAVRDKETLEKDRLKARKEGFIRVDTSI---SGSAMTVQAPGSQGFMSDADRFHTDVAGEEKVLRESRHAKHQLVYDHKRRDNQLREDQRWKTMDAKAAEEKQRWDRLRDDGGKARRNKASCDYNLVTLKYNDGKDGERLMKADNEIRHRATVRAANL-QFQNSRAGINPITGDPIARI 189
[Close]
BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A1W0A626_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A626_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.840e-34
Identity = 75/184 (40.76%), Postives = 118/184 (64.13%), Query Frame = 1 
Query:    4 TRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQPRGTI 555
            TR ER+A+RDK   EK RL  R     +++       G ++T   P + GF++DADRFH+D  GEE + R+++  +   V  N+RQ+   RE +RW+ M+ K  ++ +RWDR+RE+G KA++NKS   +N++ L+YN+G DGDRL+ +D+  +HRA +R+ NL +  ++R G N +TG P   I
Sbjct:   10 TRDERKAVRDKETWEKDRLKARKEGYVRIDTSI---SGSAMTVQAPGSQGFMSDADRFHTDVAGEEKVVRESRMAKHQMVYDNKRQNNQIREEQRWKTMDAKAAEERQRWDRMREDGGKARRNKSSCEFNLVTLKYNDGKDGDRLKKADSEIRHRATVRAANL-QFQNSRAGINPITGDPIARI 189
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BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A1V9YB29_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB29_9STRA)

HSP 1 Score: 123 bits (309), Expect = 6.700e-32
Identity = 71/180 (39.44%), Postives = 116/180 (64.44%), Query Frame = 1 
Query:    4 TRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQP 543
            TR ER+A+RDK   EK RL  R     +++       G ++TE    + G+++DADRFH+D  GEE + R+++  +   V  ++RQ+   RE +RW+ M+ K  ++ +RWDRLR++G KA++NKS   +N++ L+YN+G DG+RL  +D+  +HRA +R+ NL +  ++R G N +TG P
Sbjct:   10 TRDERKAVRDKETWEKDRLRARKEGFIRVDTSI---SGAAMTEQAHGSQGYMSDADRFHTDVAGEEKVARESRTAKHQLVYDHKRQNNQLREEQRWKAMDAKSAEEKQRWDRLRDDGGKARRNKSSCDFNLVTLKYNDGKDGERLMKADSEIRHRAAVRAANL-QFQNSRAGINPITGDP 185
[Close]
BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A024TZN2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZN2_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.660e-31
Identity = 73/180 (40.56%), Postives = 111/180 (61.67%), Query Frame = 1 
Query:    4 TRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQP 543
            TR ER+A+RDK   EK RL  R     +++       G ++T     + G+++DADRFH+D  GEE + R++Q  +       RR+D   RE +RW+ M+ K  ++ KRWD+LRE+G KA++NKS   +N I L+YN+G DG+RL+ +D   +HRA +R+ NL +   +R G N +TG P
Sbjct:   10 TRDERKAVRDKETWEKDRLRARKEGYVRVDTSI---SGSAMTVQAVGSQGYMSDADRFHTDVAGEEKVARESQIAKHQMSYDARRRDNQIREDQRWKAMDAKSAEEKKRWDQLREDGGKARRNKSSCQFNPITLKYNDGKDGERLKQADMEIRHRASVRAANL-QFNSSRAGINPITGDP 185
[Close]
BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Match: A0A6G0XI40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI40_9STRA)

HSP 1 Score: 119 bits (297), Expect = 4.080e-30
Identity = 72/180 (40.00%), Postives = 107/180 (59.44%), Query Frame = 1 
Query:    4 TRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAAGFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDMEKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSDNITKHRAQLRSNNLMRLGDTRCGYNILTGQP 543
            TR ER+A+RDK   EK RL  R     +++       G ++T     + G+++DADRFH+D  GEE + R+++  R       RR+    RE  RW+ M+ K  +D  RWD LR++G KA++NKS   +N I L+YN+G DG+RL  +D+  +HRA LR+ NL +   +R G N +TG P
Sbjct:   10 TRDERKAVRDKETWEKDRLRARKEGFVRIDTSI---SGSAMTVQAAGSQGYMSDADRFHTDVAGEEKVLRESRIARHQMTYDTRRRSNQLREEHRWQAMDAKAAEDKARWDHLRQDGGKARRNKSSCEFNPITLKYNDGKDGERLRQADSEIRHRASLRAANL-QYNSSRAGINPITGDP 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4420.11178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVW2_ECTSI4.570e-11983.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z1N9_9STRA1.270e-5853.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XXX1_9STRA2.960e-5656.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J2S6E6_9STRA2.140e-4845.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4ECF0_9STRA2.800e-4445.69Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A067C5C9_SAPPC8.420e-3641.30Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1W0A626_9STRA1.840e-3440.76Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9YB29_9STRA6.700e-3239.44Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024TZN2_9STRA3.660e-3140.56Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A6G0XI40_9STRA4.080e-3040.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4420contigH-paniculata_contig4420:5185..12008 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score124.8
Seed ortholog evalue4.7e-26
Seed eggNOG ortholog36331.EPrPI00000016882
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Source PGD
EggNOG OGs1MHF2@121069,2CUJ5@1,2S4E6@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_002360.1
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons6
Model size621
Cds size621
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4420.11178.1prot_H-paniculata_contig4420.11178.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4420 5185..12008 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930333.4725058-CDS-H-paniculata_contig4420:5184..52931622930333.4725058-CDS-H-paniculata_contig4420:5184..5293Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 5185..5293 -
1691481245.9473932-CDS-H-paniculata_contig4420:5184..52931691481245.9473932-CDS-H-paniculata_contig4420:5184..5293Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 5185..5293 -
1622930333.4902532-CDS-H-paniculata_contig4420:5821..59261622930333.4902532-CDS-H-paniculata_contig4420:5821..5926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 5822..5926 -
1691481245.9604957-CDS-H-paniculata_contig4420:5821..59261691481245.9604957-CDS-H-paniculata_contig4420:5821..5926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 5822..5926 -
1622930333.5082872-CDS-H-paniculata_contig4420:6901..70471622930333.5082872-CDS-H-paniculata_contig4420:6901..7047Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 6902..7047 -
1691481245.9707031-CDS-H-paniculata_contig4420:6901..70471691481245.9707031-CDS-H-paniculata_contig4420:6901..7047Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 6902..7047 -
1622930333.5250473-CDS-H-paniculata_contig4420:8492..85901622930333.5250473-CDS-H-paniculata_contig4420:8492..8590Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 8493..8590 -
1691481245.9809506-CDS-H-paniculata_contig4420:8492..85901691481245.9809506-CDS-H-paniculata_contig4420:8492..8590Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 8493..8590 -
1622930333.5397463-CDS-H-paniculata_contig4420:9736..98331622930333.5397463-CDS-H-paniculata_contig4420:9736..9833Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 9737..9833 -
1691481245.9905822-CDS-H-paniculata_contig4420:9736..98331691481245.9905822-CDS-H-paniculata_contig4420:9736..9833Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 9737..9833 -
1622930333.5573213-CDS-H-paniculata_contig4420:11942..120081622930333.5573213-CDS-H-paniculata_contig4420:11942..12008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 11943..12008 -
1691481246.0003443-CDS-H-paniculata_contig4420:11942..120081691481246.0003443-CDS-H-paniculata_contig4420:11942..12008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4420 11943..12008 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4420.11178.1

>prot_H-paniculata_contig4420.11178.1 ID=prot_H-paniculata_contig4420.11178.1|Name=mRNA_H-paniculata_contig4420.11178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
MTRPERRALRDKVALEKGRLMQRTGQAAKLNRDNLPPEGVSLTECTPDAA
GFIADADRFHSDTVGEEHLRRKAQHDRKVQVNVNRRQDRMQREGKRWEDM
EKKDGQDAKRWDRLREEGAKAKKNKSGVPYNMINLRYNNGIDGDRLEYSD
NITKHRAQLRSNNLMRLGDTRCGYNILTGQPRGTIVDPDPPRPSEALAHW
SHHDTH*
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mRNA from alignment at H-paniculata_contig4420:5185..12008-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4420.11178.1 ID=mRNA_H-paniculata_contig4420.11178.1|Name=mRNA_H-paniculata_contig4420.11178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6824bp|location=Sequence derived from alignment at H-paniculata_contig4420:5185..12008- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGCGACCGGAGCGTAGGGCTTTGAGGGATAAGGTTGCACTGGAGAA
GGGCAGATTGATGCAGGTGCAATCAGTGTAGTCTGCTCCTTGAATACACA
CATTTTGCGCCGTTCTGACCATGTTTCTTGTTCTTTTTCCCCCATCGTTT
TCTTGAGGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGGAGAAAG
AAGGCAACGGATACCACCTATTTTTTCAGACACGCCGTGTATTTTCTCTT
TCCACGTTTCTCCACAACGGCATCACCGGCAATGCACACACGTATAGCGT
CGAGCATCGTGTGCAGCACATTTTACCTTAGAGAGACGCTCTCACGGCTG
ACTTTAAGATGTTCCAATGAATATATTTTCTATAGTTCGCTGCTCGGTTG
GCCGTGGTGATCACACTAGACCGTCGTTTGCAACCGTTGTTGGCGTGTAC
AACGGTTGTTAACTTGTGGGTCGCTCCCATGACTGTGGGATTCTTCCAAA
GTATTATTTGTTGACTGCAGTTCGTTGACCGTTCGCTATTTCGACTGTTG
TCGTTTGTCCGTCTGTATCCCCTGGATGAACCAGAACGGCTTCTAGGGCT
GTGTACCGGTACCGATATTGTCCGATACATGGTCCGACACAATATTATCT
ACCTACCGTTTTTTTGCACCGAGTTATCGGTGCTTGCCCTTACCGGCTAT
ATAGTACTCTTTTAAGAGATCAAGATAAGACCATTCGGTTAGCGTCCGAT
AAACAGGATTATCAGAATTGCCAGTTAACCTTCAAGTATTGTCTATCCGG
ATCGGACAGAAAATCTAAATAGTAAATGATAACAAGAAGACTATATAGTA
CTATAGTTATGCCATTATCCATGGGATGTAAGATACATCGACCAATATCC
GTGACCTGCGTATTTCATAACACATGGGGACATGAAGCACATAGCCTGCC
AGACACACAGATGCCTACACCCTCACAGTCCCATGGTATGCATTAGAGAG
TCAGGGCTATCCACCCTTGTCCTGTACACTATTTGTTTTCGTATGATCCA
TTTTTCTGATCGAACGTAAAGTTTTCGTGGATAGCACGGTAACAGCATAT
CGATGTTACAGGGAGTCAATTACAGCTTTTCCTGATCAATAACAGGTCTT
TCAAGTATTGACCGAATCTTTGCTTGTTCTGCTGCCTGGCAAATCACGTT
ACATCTTGCTTTTTTCTGAAAAGATTGAAGCGGTAGAGTTCAGATGTAGC
TTCGCTCGTTGGATCGTTTCTTATTCTCTCCATGCGAGTGATGTTTTCGT
GTTCAAGATATTTCAAGTTTGATATTTGATAGTTTAAAAACAGGTACTCG
ATAGTTGTATTTGATGCAAAACGATTGACTCAAAAAATACCACAAGAGCT
ACAGTCGGCACCGTGTAGAAATGCCTACCTTGCTATCTTTCAGGGATCAC
TTCAGTCACCTTTTCATGTTAAGTTCTCCCGTTCGCGCTCATCTGTTGCC
TGAATTTTTGTTTCCGTTGCGCCATAATGTAACCTGATTTTGAAGAGAGA
AGAAGTCAAAGCGCCTATTTTCTTGCCTCCGGCGGTGCCTCCAGCGAATG
CTCTCACCAGCCGGGGAGCGCCGTTGCGGCTTCGCCGCGTTTTTCCCGTC
GCTGCGTTTTTCCTCACGGACAAAGCGCGGCGAAGTCGGGGACGGCTGCA
CCACCCTGGCGCTTCACGCAGTCGATGTTTCCGCGATATATCGGCGCAGT
CGATATCTCGTATCGTTTTTCTCTACCGATGCACAGCCCTAGATTTTTAT
CTTTTTCCGACTGAATGAAAATAAATGGGAAAACACGAGAAAAAGAGAAG
AAAATGATCTTCACGCTTTGACCATGACTCTTAGATTCTTCCGTGTGCTG
CACACAAACCCTCACCATTCTCGAGCCGCGACGTATTCGTGTAATTACCT
GTCTAGGAATTCTTCATGTTGCAGTATAAAAGTCTCCTCAATTCTTTCGA
GTATACGCCGAACGCTAGAAGCTAGTGGTTGAAGAAGACTCGTGATTGAA
AAAAAACAACTCTAGTACCGGTAGTTGCAATACGCTGTTCAACTTGTCAT
CCTCCTAGACTGACGCAGCTTGCGATGCTGACTGGCTTCCCGCCAACACC
CACACGTCTTTAATAATGCGGACAGAGAACAGGACAGGCAGCGAAATTAA
ACAGGGATAATTTACCCCCAGAGGGCGTTTCTCTCACGGAATGTACGCCG
GACGCCGCAGGCTTCATCGCCGGTGAGTGTTCGGGTTTTCTACGTCGCAG
TCCGTTCTGTCAATAGCGCAAGAAATGTTTGCACATAGTTCCATTGAGCA
CAGACATTTACCCTATTTTCGTATCGCACACAGCGCCATGCTTGGATGAA
AATTTCGTGCAGGGGGTGGCGCGGGGTTGGTGAGGGGGACGGTAGTACCG
TAGTGGCATAGTGAGGCGTAAAACAGTAAACGAACTTGGTAACAATTGCG
CACTTTGGGGGGGTGGTTAAGTCGTCTCACGATGGTAAGTCGAGTGGACA
TGGCAGCCTGTTGCATTTATTCTGTATGTAGCCCGACCATGCCCTCCTGG
GTGGTGAAGAGGATTGGGTCTACAGCAGCGCTCTACAGTACTCGTAGAGG
ACGCTATTTCATCGTTCGTCTCTGTTATCACTGTCAAGTATTGATATTGG
TCAATATTCTGTTGTTGAGATAGTGGCGGGTTGAGCAGCGAATATCGCAA
TCATTCCCCCCCCCTCTTGAGATGTACCTCGGGGAACACATGAATTTCAG
CTGACTCCGACTTGACTTGGTATATAAACATCAAGTACTACAGGAACCAA
GGTTTTTGGTATAAAGATCACGTGTACCGGATCACAAAGACGTAGACTAC
TGCTGCAAGACAAACACTGCAAGGGTAGACCAAAGTCGACGAGCACGGAA
GACCAGACCCTGTTGTGTCCAAATCAATAGTTTCAACACTTCCCTCCTAC
CCCCCAGGCACCACGTTGGCAATATCCGCTTTCACGTTGTCCTTTCGCGG
GCAAGTTCTTGGTGAACAAAGTCCCGTGCTCATCGTAAACAGCAACTGGT
GGACAACCAACTACCCGTGTTTGGACGCTGGATGTCGGCAACTTGCACCG
CTCGTAACAACGTAGTTGGCTGTGATTCTATCGATGCGGTTATTGAAGTA
ATCGCAAGAGCAAATCGGCCATTCTACTCATATCTTTAAGACCAAATATA
CTTGAGAATCCATAATTCTCCCGCAGCAACGACACTGATCGTGCTGCGGT
TGTGTCGCCACGGGGTGTCCTCTCTCTATAAATACATACTCATGGACTGC
AAAAAAGAGTGCTTCTGCATGTCCTGCCCCCGCTCTTCCCACCCATGGTG
ATGATGGTATAATGTTAGACGCGGACAGGTTTCACTCGGACACCGTGGGG
GAGGAGCACCTACGTCGGAAAGCGCAGCACGATCGGAAGGTCCAAGTTAA
TGTCAATAGGCGACAGGTGATAACAATGAACACCTCCCTGCCGCCCGCGG
AACTCGCTGCACTATGGTACTCTCTGAGTAGATGTACGTGGGCAGGGGGA
CGGGAAGAGGGGGTGTACTCTTTTGTTAGGCCCTTGACCACGCGTCCTCG
AGAGAATTGAGCTTTGTTTATATCAGAGCGATATCCGATGGCCCATCGTG
TCTCAAAAATGTTTATTTACTCTATCTACCATAGCCCTCGCCTTTTTAGG
TCATTATCTATCTCCTAGAATCTCTGGTTGGGGCGGGGGGTGCTTCACAG
GTTTGTAAGTGTATATTACAGAATGATAATGTTATCGGAAATCGAAAATG
GAGCATGATAATGCAGGGGACACGATGTAATCACCAAGGTATAAGTATGC
TGCAGTCATATGGAGAGTAATTGAATCATTTTTGCCGTAATTCGGCAGTT
ACCGGTAAGTGTCGGACGCTTTTGGGGTAACGCATGTCCCCTTCTTGGTA
TTTTGGGCAGTTTTGCGATGGATCCAAATAGATGACCACCCCGAGTACTA
CGTCAGTAACAGTAGCCCATACCAATCTAAAACGTACGCATGAAAGCTTA
TTGGGTTAGGAGTCACAGGCTTGTCTCGTGGTTTTGGCTAGAGCCTTCTC
AGGGTCTTGCATATTTGGATCAATATCACAACCCGCCTCTGATGGCTGCG
TCCCAGCGCCCCCTGTGATATGAGTATAACCTGGCGAGCACTCAGCACCG
GTTGTCGTATACTGCCCATTGTTTTGTTTTCCAAGAAAAGATGTTGGCAC
TCTAGAGTGCTTTGAAGCCATTTGAGTGCTCGTGCAATAAATAGTTCCGA
GAAGGGCTGGGTCCAGGGCACGACAGAAAATCTGTGTGCGATACTGGGAC
AACCAAGATACCGGCGATGAAAGAGTTACATATTTTTCCTGAAACGGTTC
TGTGAAGACTGCTTCGTTGGCAGATCCTTTGAATACGAAATAATTGTGCG
GTTACTGGCGAAACGATATCTGTATTTCTGATCACGTGAACATGCAATCC
ATCTGGCGGCGGCGAGCTCCGTTGTGACATAATGTAGTTAAACGTTGCAG
TACACTATCATGGACGACATGTGCCGAGCCTTTCAACTCCAATGTTTTTT
GGGTTCGAGGGTTTTGCAGTCATCGAGTCCCTGTCGGCGTCTGCCGCGAC
TTCCCTTGCTCCTTGACCACCATGGGTACATCTTGACAACACATATCTGG
GTGACACGCCATCCGCTTCCTCTCGACATGCGCATGATGCGCGCAAAGTC
CCCTTCAAACTTCGAACATGCCTGCCGGACAATCCATATGAGTTGTCAAT
ACTGCCGGATGCATCGCAAAATTAAGGGAAATCTCTGTTGACAGCTTGTA
CGTACGGCTCTTGCGTTTTTCTTTTGCTCTACTGTATGTGGTGCGGTTCA
TGGTGGAATAGGACCGCATGCAGCGCGAGGGTAAGCGGTGGGAAGATATG
GAGAAGAAGGACGGACAGGACGCGAAGCGGTGGGACCGACTTCGAGAAGA
GGGAGCAAAGGCGAAGAAAAACAAGTCGGGCGTGCCGTACAACATGATCA
ACCTAAGGTGATTGTTGTTATTGTTGTTGTTGATGGTGGTGGTGGTGGTG
GTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGT
GGTGGGTGGTGGTGACGGTGGTGACAGGGGTGACGTTAGTGTTGGTGGTG
ACGAGGCAATAGTGTTGTTGCAGGAAGTAGTACTGGTAAAGAGCCGGTCT
ACCAGAACCTGACTTACCCAGATTAACAATCGGAAAGGGACTATTCTGGT
CCAGTCCGTCCGAATCGTTGGGCCTGGATCCCCGAAGTCGAATATACCAC
CTCGCGACATTTTTCCCGTTTACCCAAAACGAGCATGGGAACATCTGCCC
TACTCGAGTCCGCGAGCTCAGGCTATTGTTATTCTCCACCGACCTGCTTA
GCACTGCCCTATCTATTCTCCCTCTCGCTGAATACTAAAATGCCATATCC
ACGTAACAGAACGACCGGTCTATACAGTACCTGTGTTGTGCTTTTATTCA
TTGAGCCTCCTCGAAAAAATGATGCCATTTCATTTTCCAGTTGGTGCACA
CCTACCTCTGGGTGTCAGAGTGGTAGGTGACTACCAGAGACGGGACGACA
CTCGGTATACATTGTGTACACTGTCGTTGACTATGAAGCATAGTGAGCAA
CAGCAACGTGTAATGCTAATATTAATAGTGGTAATGTTTCACTGGTGAGC
CGCATCTGTATTTGCTTAGAGCTGTATGCTAGGTAACAAATGATTATGCG
TGCATCTGGACAATGACTCATCGACTTCACACGGCGATCGCTTTGAAAAA
AACTAGGTTTGAGCCAAAACAAGCGAATTGAATGACCTGTAGAACTGGGT
ATACAAAAATAGTTGAAGGTATCATTGCAATATAGATCCTATCGAACTCA
AATCTAAATGGGATATTCTAGGCATATCTTCAAGTACGCGTTGTTCTATA
AACAATTTCTCGGGCGTTATATTTTCTGTAAGGTACAACAATGGCATCGA
CGGCGATCGCCTCGAGTACAGCGACAACATTACCAAGCATAGGGCCCAGC
TCAGGTCCAACAACCTTATGCGCCTTGGTGACACGAGGTAAGCTCAATAA
ACATCCCATGCATGGCTAGAGCGTATTCGGAGGACCATTGGATATTCACG
GGCTTGGGGCGCGCGTCGGGGAGGGGGGGGTAAGGTCTACACTTTAACTA
TAGTTGACAACGTACACAGAAGTAGACCATGAGGCAGTGTTTTTGCGAAG
TACTTGCTGGGGCATCGTTCAACGATCGAGGGCGTTCAACAATGGGCCGA
GTTTTAGGCACTCCCGACAGGACCCCCTCCGGGGATTCTGCTTTGGCGCC
CCCTGGGTAGATAGCATCGGCCTGATTATCTGATACAGTACCTAGGTAAA
AGTGTTATCCTACAACGTTGGATACGGAATATAGTACAACAATATCTCTA
GGGAGGGGAATAATTGCAAGTTTCCCCTGCCCTCCAGGTTCCAATACCTT
ACCTTCCTTCGATTGATTGTTAAACGACTTGTGGGTTCGAGTTTGTCCTA
CCCCTCAAATCTCTTCGCCTGTGACGAAGCCGCCCATGTGACGAGATGAA
CGTGAACCAACATAGGTGCGGTTACAACATCCTAACGGGTCAGCCAAGGG
GAACCATTGTGGACCCGGATCCGCCTCGGCCTAGCGAAGCGCTCGCACAT
TGGAGTCACCATGACACACACTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig4420:5185..12008-

>mRNA_H-paniculata_contig4420.11178.1 ID=mRNA_H-paniculata_contig4420.11178.1|Name=mRNA_H-paniculata_contig4420.11178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig4420:5185..12008- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGCGACCGGAGCGTAGGGCTTTGAGGGATAAGGTTGCACTGGAGAA
GGGCAGATTGATGCAGATGACGCGACCGGAGCGTAGGGCTTTGAGGGATA
AGGTTGCACTGGAGAAGGGCAGATTGATGCAGAGAACAGGACAGGCAGCG
AAATTAAACAGGGATAATTTACCCCCAGAGGGCGTTTCTCTCACGGAATG
TACGCCGGACGCCGCAGGCTTCATCGCCGAGAACAGGACAGGCAGCGAAA
TTAAACAGGGATAATTTACCCCCAGAGGGCGTTTCTCTCACGGAATGTAC
GCCGGACGCCGCAGGCTTCATCGCCGACGCGGACAGGTTTCACTCGGACA
CCGTGGGGGAGGAGCACCTACGTCGGAAAGCGCAGCACGATCGGAAGGTC
CAAGTTAATGTCAATAGGCGACAGACGCGGACAGGTTTCACTCGGACACC
GTGGGGGAGGAGCACCTACGTCGGAAAGCGCAGCACGATCGGAAGGTCCA
AGTTAATGTCAATAGGCGACAGGACCGCATGCAGCGCGAGGGTAAGCGGT
GGGAAGATATGGAGAAGAAGGACGGACAGGACGCGAAGCGGTGGGACCGA
CTTCGAGAAGAGGGAGCAAAGGCGAAGAAAAACAAGTCGGGCGTGCCGTA
CAACATGATCAACCTAAGGACCGCATGCAGCGCGAGGGTAAGCGGTGGGA
AGATATGGAGAAGAAGGACGGACAGGACGCGAAGCGGTGGGACCGACTTC
GAGAAGAGGGAGCAAAGGCGAAGAAAAACAAGTCGGGCGTGCCGTACAAC
ATGATCAACCTAAGGTACAACAATGGCATCGACGGCGATCGCCTCGAGTA
CAGCGACAACATTACCAAGCATAGGGCCCAGCTCAGGTCCAACAACCTTA
TGCGCCTTGGTGACACGAGGTACAACAATGGCATCGACGGCGATCGCCTC
GAGTACAGCGACAACATTACCAAGCATAGGGCCCAGCTCAGGTCCAACAA
CCTTATGCGCCTTGGTGACACGAGGTGCGGTTACAACATCCTAACGGGTC
AGCCAAGGGGAACCATTGTGGACCCGGATCCGCCTCGGCCTAGCGAAGCG
CTCGCACATTGGAGTCACCATGACACACACTGAGTGCGGTTACAACATCC
TAACGGGTCAGCCAAGGGGAACCATTGTGGACCCGGATCCGCCTCGGCCT
AGCGAAGCGCTCGCACATTGGAGTCACCATGACACACACTGA
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