prot_H-paniculata_contig11744.1117.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11744.1117.1
Unique Nameprot_H-paniculata_contig11744.1117.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length423
Homology
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BLAST of mRNA_H-paniculata_contig11744.1117.1 vs. uniprot
Match: D8LSZ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSZ4_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 2.320e-81
Identity = 157/350 (44.86%), Postives = 195/350 (55.71%), Query Frame = 0 
Query:   82 DSIVFVALGPAARSTSLLYALRSLKEEGEWRGPVHVIVGATEDLGCLMSHLPDADNINIVETSAETSTVAMG----KGGDGSSTIIAHAKMAKMHLLDLLPEALRRVVYIDVDVITQQPIAPFIGMVERRWAELDRA---------------------------DAAAAAKKKAANELRAYTHRLGEKTAATATKRRDGQISPPSTLLIFPDAWGHTVPVCPGCDLAHSGVVGIERGRSELCLKLWLEAFAGDDKSGREGTSTDQEALDYAIRKGSGCEATWLDASHLRFMKDISVLFGLSRTRTFGHFTSLLHPERLNWLFRRHYSKSLRRGFDEWGGKRGVIERCALE 400
            DSIVFVALGPAARS SLLYAL SL+EEG W G VHV+V   +DL CL S+L    ++  +  +        G     GG  +  ++ +AKMAKM LLDLLP ++ RVVY+D DV+TQ+P+ PF+  V R W ELDR                                                                     T++IF DA GHTVPVC GCD AHSGVV + RG SE CLKLW +AF GD  +G  GTSTDQEALD A+ +GSGCEA  +   HL FMKD  V+ GL+RT TFGH+T LLHP+ L  ++RR Y  +L   F+EWG  +G I+ CA+E
Sbjct:   64 DSIVFVALGPAARSASLLYALTSLREEGGWDGQVHVVVEREDDLACLSSYL--RQSVTAIAIAPXXXXXXXGGSLHSGGGDTRGVVQNAKMAKMKLLDLLPPSVERVVYVDCDVVTQRPLGPFLDAVAREWDELDRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVMIFADAGGHTVPVCRGCDRAHSGVVALARGHSERCLKLWHDAFEGDG-AGNGGTSTDQEALDAALGEGSGCEAIMMGRWHLSFMKDAFVMAGLTRTSTFGHYTGLLHPKTLGKVYRRFYEWALGMSFEEWG--QGEIQGCAVE 408
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11744.1117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSZ4_ECTSI2.320e-8144.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..422
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..19
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11744contigH-paniculata_contig11744:3180..5204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11744.1117.1mRNA_H-paniculata_contig11744.1117.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11744 3060..7189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11744.1117.1 ID=prot_H-paniculata_contig11744.1117.1|Name=mRNA_H-paniculata_contig11744.1117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=423bp
MRCRLFSLWRNVSLAALCLYVCGSIYIFSPPLRTSTTGARADNGAHKDSN
AQYSTFKQQPQNTVVPQPARPMAPETLQRVVDSIVFVALGPAARSTSLLY
ALRSLKEEGEWRGPVHVIVGATEDLGCLMSHLPDADNINIVETSAETSTV
AMGKGGDGSSTIIAHAKMAKMHLLDLLPEALRRVVYIDVDVITQQPIAPF
IGMVERRWAELDRADAAAAAKKKAANELRAYTHRLGEKTAATATKRRDGQ
ISPPSTLLIFPDAWGHTVPVCPGCDLAHSGVVGIERGRSELCLKLWLEAF
AGDDKSGREGTSTDQEALDYAIRKGSGCEATWLDASHLRFMKDISVLFGL
SRTRTFGHFTSLLHPERLNWLFRRHYSKSLRRGFDEWGGKRGVIERCALE
IEHRHAENAEANDRVSRRLRHH*
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