prot_H-paniculata_contig44165.11170.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44165.11170.1
Unique Nameprot_H-paniculata_contig44165.11170.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length42
Homology
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: A0A2I4CWC1_9TELE (crooked neck-like protein 1 n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4CWC1_9TELE)

HSP 1 Score: 64.3 bits (155), Expect = 4.080e-12
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRGVV 40
            M+S+  NHARN+WDRA+ +LPRV QFWYKY+YME   G V
Sbjct:    3 MKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNV 42          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: A0A1X7U4V8_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U4V8_AMPQE)

HSP 1 Score: 61.6 bits (148), Expect = 7.450e-11
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRG 38
            M++K  NHARN+WDR V LLPR+ QFW+KY+YME   G
Sbjct:    3 MKNKQINHARNIWDRVVTLLPRINQFWFKYAYMEEKLG 40          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: A0A0L0FIW4_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FIW4_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 9.150e-11
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRGVVCS 42
            MR +  NHARNVWDRAV +LPR +QFWYKY+YME   G + +
Sbjct:    3 MRHRAVNHARNVWDRAVTILPRADQFWYKYAYMEEMLGNIAA 44          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: A0A183KDF0_9TREM (Uncharacterized protein n=1 Tax=Schistosoma curassoni TaxID=6186 RepID=A0A183KDF0_9TREM)

HSP 1 Score: 63.5 bits (153), Expect = 1.250e-10
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRGVV 40
            MR K  NHARN+WDRAV L+PR  QFWYKY+YME + G V
Sbjct:    3 MRHKQVNHARNLWDRAVTLMPRANQFWYKYTYMEETLGNV 42          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: UPI001EEBAE9A (crooked neck-like protein 1 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEBAE9A)

HSP 1 Score: 63.2 bits (152), Expect = 1.710e-10
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRGVV 40
            M+++  NHARN+WDRA+ +LPRV QFWYKY+YME   G V
Sbjct:    3 MKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNV 42          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: A0A200PSA8_9MAGN (RNA-processing protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PSA8_9MAGN)

HSP 1 Score: 63.2 bits (152), Expect = 1.710e-10
Identity = 28/40 (70.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRGVV 40
            M++KF NHARNVWDRAV LLPRV Q WYKY +ME   G V
Sbjct:    1 MKNKFINHARNVWDRAVTLLPRVAQLWYKYIHMEEMLGNV 40          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: A0A0D3FW52_9ORYZ (Uncharacterized protein n=1 Tax=Oryza barthii TaxID=65489 RepID=A0A0D3FW52_9ORYZ)

HSP 1 Score: 62.8 bits (151), Expect = 2.330e-10
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRGVVCS 42
            MR+ F NHARN+WDRAV++LPRV+Q WYKY +ME   G V +
Sbjct:  124 MRNGFANHARNLWDRAVSVLPRVDQLWYKYIHMEELLGAVAN 165          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: H9JG12_BOMMO (Uncharacterized protein n=1 Tax=Bombyx mori TaxID=7091 RepID=H9JG12_BOMMO)

HSP 1 Score: 62.8 bits (151), Expect = 2.330e-10
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYME 34
            MR++  NHARN+WDRAV +LPRV QFWYKY+YME
Sbjct:   12 MRNRQVNHARNLWDRAVTILPRVSQFWYKYTYME 45          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: A0A0D9ZL17_9ORYZ (Uncharacterized protein n=2 Tax=Oryza TaxID=4527 RepID=A0A0D9ZL17_9ORYZ)

HSP 1 Score: 62.8 bits (151), Expect = 2.330e-10
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRGVVCS 42
            MR+ F NHARN+WDRAV++LPRV+Q WYKY +ME   G V +
Sbjct:  124 MRNGFANHARNLWDRAVSVLPRVDQLWYKYIHMEELLGAVAN 165          
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Match: UPI001E272EAF (protein crooked neck n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E272EAF)

HSP 1 Score: 62.8 bits (151), Expect = 2.340e-10
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYME 34
            MR++  NHARN+WDRAV +LPRV QFWYKY+YME
Sbjct:    3 MRNRQVNHARNLWDRAVTILPRVSQFWYKYTYME 36          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44165.11170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I4CWC1_9TELE4.080e-1265.00crooked neck-like protein 1 n=1 Tax=Austrofundulus... [more]
A0A1X7U4V8_AMPQE7.450e-1163.16Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A0L0FIW4_9EUKA9.150e-1161.90Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A183KDF0_9TREM1.250e-1067.50Uncharacterized protein n=1 Tax=Schistosoma curass... [more]
UPI001EEBAE9A1.710e-1062.50crooked neck-like protein 1 n=1 Tax=Silurus meridi... [more]
A0A200PSA8_9MAGN1.710e-1070.00RNA-processing protein n=1 Tax=Macleaya cordata Ta... [more]
A0A0D3FW52_9ORYZ2.330e-1061.90Uncharacterized protein n=1 Tax=Oryza barthii TaxI... [more]
H9JG12_BOMMO2.330e-1073.53Uncharacterized protein n=1 Tax=Bombyx mori TaxID=... [more]
A0A0D9ZL17_9ORYZ2.330e-1061.90Uncharacterized protein n=2 Tax=Oryza TaxID=4527 R... [more]
UPI001E272EAF2.340e-1073.53protein crooked neck n=1 Tax=Melitaea cinxia TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 4..36
e-value: 0.0018
score: 27.5
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..40
NoneNo IPR availablePANTHERPTHR11246:SF18coord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44165contigH-paniculata_contig44165:933..1058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44165.11170.1mRNA_H-paniculata_contig44165.11170.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44165 933..1088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44165.11170.1 ID=prot_H-paniculata_contig44165.11170.1|Name=mRNA_H-paniculata_contig44165.11170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=42bp
MRSKFPNHARNVWDRAVALLPRVEQFWYKYSYMEVSRGVVCS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT