prot_H-paniculata_contig4416.11168.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4416.11168.1
Unique Nameprot_H-paniculata_contig4416.11168.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length366
Homology
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BLAST of mRNA_H-paniculata_contig4416.11168.1 vs. uniprot
Match: A0A6H5LFU5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFU5_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.230e-9
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0 
Query:    1 MELEAARLSLCEEAILRDLLRRCQIFLPPGYARADAVRKLR 41
            +ELEAARL+LCEEA+LRDLLRRC I LPPGYARADAV KLR
Sbjct: 1476 LELEAARLALCEEAVLRDLLRRCGIALPPGYARADAVNKLR 1516
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BLAST of mRNA_H-paniculata_contig4416.11168.1 vs. uniprot
Match: D8LHA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA8_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 2.810e-9
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0 
Query:    1 MELEAARLSLCEEAILRDLLRRCQIFLPPGYARADAVRKLR 41
            +EL+AARL+LCEEA+LRDLLRRC I LPPGYARADAV KLR
Sbjct: 1233 LELDAARLALCEEAVLRDLLRRCGIALPPGYARADAVNKLR 1273
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4416.11168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LFU5_9PHAE1.230e-985.37Reverse transcriptase domain-containing protein n=... [more]
D8LHA8_ECTSI2.810e-982.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4416contigH-paniculata_contig4416:857..6544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4416.11168.1mRNA_H-paniculata_contig4416.11168.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4416 854..6544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4416.11168.1 ID=prot_H-paniculata_contig4416.11168.1|Name=mRNA_H-paniculata_contig4416.11168.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=366bp
MELEAARLSLCEEAILRDLLRRCQIFLPPGYARADAVRKLRSRAPSPGAG
VGTVGRGRGGGTQAGDGNASAGRQGAYANTPAKPPALGRPTAVAVVATTS
SPLSTGTAGGPIPSGRKDSYSFSLGSSSNNNNNNTSSSGRQSKKGSRGKT
GWRGGKVLTGRAAGSNRRGGKRPRSEGSVEDDTSDDDLASLSDSSHSSIR
RSSSGSSHRRPRGSPLLFAMADADASYFPPHQQAFTPNLTAAEALRLATA
PDEPPEDNPAAAPDSMTVDAAGAPVAAAGILATSAPLTPLTSAMSHNSAA
AAAGSTGTAGGDGSLPVSSGAASAASAASEDSSAIVSTTGGWAHEVGYGA
IIGVAHGGAGAGAGAG
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