prot_H-paniculata_contig44123.11166.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44123.11166.1
Unique Nameprot_H-paniculata_contig44123.11166.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length44
Homology
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: D8LFD9_ECTSI (UBP-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD9_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.670e-17
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    1 LHCETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            L CETCRIAHNLWICMVCGHIGCGRYT EHA+RHF L  H+Y
Sbjct:  669 LCCETCRIAHNLWICMVCGHIGCGRYTGEHASRHFRLSGHTY 710          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: A0A835YX21_9STRA (UBP-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX21_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.420e-13
Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    3 CETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            CE CRIAHNLW+CMVCGHIGCGRYT EHA  H     H+Y
Sbjct:  345 CEACRIAHNLWVCMVCGHIGCGRYTAEHAKAHHAQTGHTY 384          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: I2CRA4_NANGC (Brca1-associated protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRA4_NANGC)

HSP 1 Score: 69.3 bits (168), Expect = 1.040e-12
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 LHCETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            L C TC I  NLWIC++CGH+GCGRYT EHA RHFH   H +
Sbjct:  224 LTCYTCNIPENLWICLLCGHVGCGRYTAEHAKRHFHCCGHIF 265          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: W7TMC1_9STRA (Brca1-associated protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMC1_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.260e-12
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 LHCETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            L C TC I  NLWIC++CGH+GCGRYT EHA RHFH   H +
Sbjct:  587 LTCYTCNIPENLWICLLCGHVGCGRYTAEHAKRHFHCCGHIF 628          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: A0A061RRD2_9CHLO (BRCA1-associated protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RRD2_9CHLO)

HSP 1 Score: 64.7 bits (156), Expect = 5.080e-11
Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    2 HCETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            HC TC    NLWIC++CGH+GCGRY E HAA HF    H Y
Sbjct:  242 HCATCGSRENLWICLICGHVGCGRYMEAHAADHFRESGHCY 282          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: A0A2G8LIG2_STIJA (Putative BRCA1-associated protein-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LIG2_STIJA)

HSP 1 Score: 64.7 bits (156), Expect = 5.350e-11
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    3 CETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            C  CR   NLWIC+VCGHIGCGRY E HA RHF   +H+Y
Sbjct:  337 CFECRSQENLWICLVCGHIGCGRYVETHAFRHFEETQHTY 376          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: A0A2G8JIS8_STIJA (Putative BRCA1-associated protein-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JIS8_STIJA)

HSP 1 Score: 64.7 bits (156), Expect = 5.350e-11
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    3 CETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            C  CR   NLWIC+VCGHIGCGRY E HA RHF   +H+Y
Sbjct:  351 CFECRSQENLWICLVCGHIGCGRYVETHAFRHFEETQHTY 390          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: A0A8C4WUR0_EPTBU (BRCA1 associated protein n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WUR0_EPTBU)

HSP 1 Score: 63.9 bits (154), Expect = 1.000e-10
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    2 HCETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            HC  C +  NLWIC+VCGHIGCGRY   HA +HF   +H+Y
Sbjct:  322 HCFVCGVQENLWICLVCGHIGCGRYESRHAHQHFEETQHTY 362          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: A0A1V9Z771_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z771_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.360e-10
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    3 CETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            CE C    +LWIC++CGHIGCGRY+ EHA RH+    H+Y
Sbjct: 1056 CEVCETTEHLWICLICGHIGCGRYSNEHAKRHYQETLHTY 1095          
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Match: UPI001591D6A9 (BRCA1-associated protein-like n=1 Tax=Zootoca vivipara TaxID=8524 RepID=UPI001591D6A9)

HSP 1 Score: 60.8 bits (146), Expect = 2.210e-10
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    3 CETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSY 42
            C  C +  NLWIC++CGHIGCGRY   HA +HF   +H+Y
Sbjct:   99 CFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTY 138          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44123.11166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFD9_ECTSI1.670e-1783.33UBP-type domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YX21_9STRA1.420e-1372.50UBP-type domain-containing protein n=1 Tax=Tribone... [more]
I2CRA4_NANGC1.040e-1264.29Brca1-associated protein (Fragment) n=1 Tax=Nannoc... [more]
W7TMC1_9STRA1.260e-1264.29Brca1-associated protein n=1 Tax=Nannochloropsis g... [more]
A0A061RRD2_9CHLO5.080e-1160.98BRCA1-associated protein n=2 Tax=Tetraselmis sp. G... [more]
A0A2G8LIG2_STIJA5.350e-1165.00Putative BRCA1-associated protein-like n=1 Tax=Sti... [more]
A0A2G8JIS8_STIJA5.350e-1165.00Putative BRCA1-associated protein-like n=1 Tax=Sti... [more]
A0A8C4WUR0_EPTBU1.000e-1058.54BRCA1 associated protein n=2 Tax=Eptatretus burger... [more]
A0A1V9Z771_9STRA1.360e-1057.50Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
UPI001591D6A92.210e-1055.00BRCA1-associated protein-like n=1 Tax=Zootoca vivi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001607Zinc finger, UBP-typeSMARTSM00290Zf_UBP_1coord: 2..43
e-value: 1.1E-4
score: 31.6
IPR001607Zinc finger, UBP-typePFAMPF02148zf-UBPcoord: 3..40
e-value: 1.5E-11
score: 44.4
IPR001607Zinc finger, UBP-typePROSITEPS50271ZF_UBPcoord: 1..43
score: 12.414
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..43
e-value: 1.3E-12
score: 49.7
NoneNo IPR availablePANTHERPTHR24007BRCA1-ASSOCIATED PROTEINcoord: 2..42
NoneNo IPR availablePANTHERPTHR24007:SF7BRCA1-ASSOCIATED PROTEINcoord: 2..42
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44123contigH-paniculata_contig44123:918..1049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44123.11166.1mRNA_H-paniculata_contig44123.11166.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44123 918..1049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44123.11166.1 ID=prot_H-paniculata_contig44123.11166.1|Name=mRNA_H-paniculata_contig44123.11166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp
LHCETCRIAHNLWICMVCGHIGCGRYTEEHAARHFHLFRHSYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR013083Znf_RING/FYVE/PHD