prot_H-paniculata_contig4412.11164.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4412.11164.1
Unique Nameprot_H-paniculata_contig4412.11164.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
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BLAST of mRNA_H-paniculata_contig4412.11164.1 vs. uniprot
Match: A0A6H5K715_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K715_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.610e-8
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:    1 AHAVRSDPAAVALR--VETLASGLRDLGKRVDCKGDTVAMERVLQGKVDK 48
            AHAVRSDPAAVALR  +ET++SGL  L KRVD K    A ER L+ KVDK
Sbjct:   94 AHAVRSDPAAVALRSRIETISSGLEGLSKRVDNKASASATERALEAKVDK 143
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BLAST of mRNA_H-paniculata_contig4412.11164.1 vs. uniprot
Match: D8LGB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB7_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 3.250e-7
Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:    1 AHAVRSDPAAVALRVETLASGLRDLGKRVDCKGDTVAMERVL 42
            AHAVRSDPAAVALR+ET++SGL  L KRVD K    A ER L
Sbjct:  164 AHAVRSDPAAVALRIETISSGLEGLSKRVDHKASASATERAL 205
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4412.11164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K715_9PHAE3.610e-866.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGB7_ECTSI3.250e-769.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4412contigH-paniculata_contig4412:8624..9750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4412.11164.1mRNA_H-paniculata_contig4412.11164.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4412 8624..9750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4412.11164.1 ID=prot_H-paniculata_contig4412.11164.1|Name=mRNA_H-paniculata_contig4412.11164.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
AHAVRSDPAAVALRVETLASGLRDLGKRVDCKGDTVAMERVLQGKVDKQT
LDAALSSKAERTDLARIEASAA
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