prot_H-paniculata_contig4403.11154.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4403.11154.1
Unique Nameprot_H-paniculata_contig4403.11154.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length327
Homology
BLAST of mRNA_H-paniculata_contig4403.11154.1 vs. uniprot
Match: D7FS82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS82_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 2.120e-73
Identity = 118/233 (50.64%), Postives = 159/233 (68.24%), Query Frame = 0
Query:    1 AVQYISDTTCNFTFSGGDLPKFQLPEAGQNNPGDQVLNANNSIIH----VQNASEPVFGCNGESASYYVGNNTWNTTFV-DAGTEYDIDIFYATYDDQLWVRTIQLYMDPSLYEAVNNTIIRLNVTCT--DYS----NSCLEFRANFSEQTDYNYSSPYPFNDSCYHGFATGDRVRMVTVPATESRGHLTSSSLSPNITIIAAGGVEMGLAWSEAFQENGKEKDDDEYWAPWW 222
            A Q+ +   CNFTFS G LP F+LPEAG N+PGD  LN  N+II      ++ +  +  CNGES++Y+VG++TWNTT++ + G E ++D+FYATY +QLWVR +Q +MDPSLYEA+N+T IRLN+TC   D+S    N CLEF  NF+E T YNY+ PY F D C HGF++G++V+ V V A    G  +S+SL     +I AG  + GL WSE F E+G  KDD E+W+ WW
Sbjct:   34 ASQFTTTDGCNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDD-EFWSDWW 265          
BLAST of mRNA_H-paniculata_contig4403.11154.1 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 8.740e-70
Identity = 121/248 (48.79%), Postives = 162/248 (65.32%), Query Frame = 0
Query:    1 AVQYISDTTCNFTFSGGDLPKFQLPEAGQNNPGDQVLNANNSIIH----VQNASEPVFGCNGESASYYVGNNTWNTTFV-DAGTEYDIDIFYATYDDQLWVRTIQLYMDPSLYEAVNNTIIRLNVTCT--DYS----NSCLEFRANFSEQTDYNYSSPYPFNDSCYHGFATGDRVRMVTVPATESRGHLTSSSLSPNITIIAAGGVEMGLAWSEAFQENGKEKDDDEYWAPWWEKTHRKHGGQRNDHD 237
            A Q+ +   CNFTFS G LP F+LPEAG N+PGD  LN  N+II      ++ +  +  CNGES++Y VG++TWNTT+V + G E ++D+FYATY +QLWVR +Q +MDPSLYEA+N+T IRLN+TC   D+S    N CLEF  NF+E T YNY+ PY F D C HGF++G++V+ V V A    G  +S+SL     +I AG  + GL WSE F E+G  KDD E+W+ WW     ++G      D
Sbjct:   20 ASQFTTTDACNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYQVGDDTWNTTYVGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEKVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDD-EFWSNWWADVDSRYGSTEESDD 266          
BLAST of mRNA_H-paniculata_contig4403.11154.1 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 1.030e-69
Identity = 120/248 (48.39%), Postives = 163/248 (65.73%), Query Frame = 0
Query:    1 AVQYISDTTCNFTFSGGDLPKFQLPEAGQNNPGDQVLNANNSIIH----VQNASEPVFGCNGESASYYVGNNTWNTTFV-DAGTEYDIDIFYATYDDQLWVRTIQLYMDPSLYEAVNNTIIRLNVTCT--DYS----NSCLEFRANFSEQTDYNYSSPYPFNDSCYHGFATGDRVRMVTVPATESRGHLTSSSLSPNITIIAAGGVEMGLAWSEAFQENGKEKDDDEYWAPWWEKTHRKHGGQRNDHD 237
            A Q+ +   CNFTFS G LP F+LPEAG N+PGD  LN  N+II      ++ +  +  CNGES++Y+VG++TWNTT++ + G E ++D+FYATY +QLWVR +Q +MDPSLYEA+N+T IRLN+TC   D+S    N CLEF  NF+E T YNY+ PY F D C HGF++G++V+ V V A    G  +S+SL     +I AG  + GL WSE F E+G  KDD E+W+ WW     ++G      D
Sbjct:   20 ASQFTTTDACNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEKVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDD-EFWSNWWAVVDSRYGSTEESDD 266          
BLAST of mRNA_H-paniculata_contig4403.11154.1 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 5.350e-51
Identity = 92/189 (48.68%), Postives = 126/189 (66.67%), Query Frame = 0
Query:   56 CNGESASYYVGNNTWNTTFV-DAGTEYDIDIFYATYDDQLWVRTIQLYMDPSLYEAVNNTIIRLNVTCT--DYS----NSCLEFRANFSEQTDYNYSSPYPFNDSCYHGFATGDRVRMVTVPATESRGHLTSSSLSPNITIIAAGGVEMGLAWSEAFQENGKEKDDDEYWAPWWEKTHRKHGGQRNDHD 237
            CNGES++Y+VG++TWNTT++ + G +  +D+FYATY +QLWVR +Q +MDPSLYEA+N+T IRLN+TC   D+S    N CLEF  NF+E T YNY+ PY F D C HGF++G++V+ V V A    G  +S+SL     +I AG  + G  WSE F E+G  KDD E+W+ WW     ++G      D
Sbjct:   19 CNGESSAYHVGDDTWNTTYIGNDGDKLGVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGPPWSEGFNEDGSRKDD-EFWSDWWAVVDSRYGSTEESDD 206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4403.11154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FS82_ECTSI2.120e-7350.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRK2_ECTSI8.740e-7048.79WSC domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G672_ECTSI1.030e-6948.39WSC domain-containing protein n=3 Tax=Ectocarpus s... [more]
D7G7E4_ECTSI5.350e-5148.68WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4403contigH-paniculata_contig4403:1010..2965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4403.11154.1mRNA_H-paniculata_contig4403.11154.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4403 1010..4569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4403.11154.1 ID=prot_H-paniculata_contig4403.11154.1|Name=mRNA_H-paniculata_contig4403.11154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp
AVQYISDTTCNFTFSGGDLPKFQLPEAGQNNPGDQVLNANNSIIHVQNAS
EPVFGCNGESASYYVGNNTWNTTFVDAGTEYDIDIFYATYDDQLWVRTIQ
LYMDPSLYEAVNNTIIRLNVTCTDYSNSCLEFRANFSEQTDYNYSSPYPF
NDSCYHGFATGDRVRMVTVPATESRGHLTSSSLSPNITIIAAGGVEMGLA
WSEAFQENGKEKDDDEYWAPWWEKTHRKHGGQRNDHDSSDDSDDSDDGTY
MGYFSPSSFWLPWYNNQRPLVTSSGMKVYRIFQSFLFSVALGQSTIVDDY
ATSMNTSIVLTEHEMHMQHLSFVCSL*
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