prot_H-paniculata_contig4395.11137.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4395.11137.1
Unique Nameprot_H-paniculata_contig4395.11137.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1289
Homology
BLAST of mRNA_H-paniculata_contig4395.11137.1 vs. uniprot
Match: D7FMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA1_ECTSI)

HSP 1 Score: 608 bits (1569), Expect = 4.940e-186
Identity = 355/599 (59.27%), Postives = 430/599 (71.79%), Query Frame = 0
Query:  711 ASVVSAETDVAVTLDAAPTPLSQRERDENVLRAHLASWRFCFHEAAALLTPVLGAGNVETPHGGVSETAAREV--DSGTAGGANGGLATAGGFLVAPSEEIDLQSELWGKLVQAEALMLQTMLSMSSGATKDTVAACQAVSETLEVSLPSSQNKSTLQEEIAIKLAGAADVVRSKSPN-ARAAPPEALAAVSVAPTLAEQVSWRSVLIELEVLMVRVAMQLMAGQVIKAAATIRKVIKGSHWLLQAIEQDTKAAKKSRDKAQAAAAGG-VGLLQSLFFNKKPSIPANAAPTPRPG-----------------QRSDGSRDASGLGKNSVNGGSSGPQSNGEGGAGAHSLIEEAVPDDFAGRSWEGYLHHVNFLVALLHVGTSLMPKNLIKILGHYLGYTPSFERGLSLLASCCNKRGMRRPCAAAVLELLVFREVSKPALGSAGXXXXXXXXARDEAVARATALDTAQVALESFYSKFPVVPLLSVPHAKALQASGEFEEAYELCLMAQEVVDQSVLKGEGMGPAHDPHILWLQLAQSSFFLQRWERALDFFTRIVEGVSRVCEKDQRGMTGLSAAYAAASMCGVLPVKQEKIHKLMVV 1288
            A+ +  E   A  LDA P PL+Q ERDEN+LRAHLASWRFCFHEAAALLTPVLGAG VETP+G V          DSG  GGA         FLV+ +EE+DL SELW KLVQAEALMLQTMLS+SSGA KDT+AAC+AVSE LEV LP S+++ T++++IA KLA AA+V RS  P+ + +A  +A  AVS+ PTLAEQ  +R++L+ELEVLMVRVAMQLMAG ++KAA + RK +K S+WLL+A + D K AK++RDKA        VG++QS FF +K   PA  A     G                 +RSDG R  S    N    G++  +S        + LIE AVP +FAGR W GYLHHV+F+VAL+HVGTSLMPK L+K++ H +GYTPSF++GLSLL+ CC+ +GMRRPCA AVLELLVFRE     + +A         A  E +ARA ALD AQ ALESFY+ FPVVPLLSV HAKALQ SGE+EEAY+LCLMAQ+VVD+SV KG+GMGPAHDPH+LWLQLA SSFFLQRW RALD FTRIVEGV++ CE D+RG+TG SAAYAAAS CGV PVKQ ++HKL+ V
Sbjct: 1270 AAELPEEVATAAVLDAPP-PLTQAERDENILRAHLASWRFCFHEAAALLTPVLGAGYVETPNGTVGGXXXXXXXGDSGPVGGA---------FLVSSTEEVDLHSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEVCLPPSKSRDTVRDDIAFKLAAAAEVTRSSRPDGSSSASQDAYEAVSLPPTLAEQ--FRALLMELEVLMVRVAMQLMAGHLLKAATSTRKFLKTSNWLLKAKDTDFKTAKRARDKAAXXXXXXXVGIIQSFFFKQKAPAPARPAAAAGRGSTRAVNGKVNGDLANGRKRSDGGRTGSSRFSNGSAPGTADEES--------YRLIEGAVPTEFAGRDWVGYLHHVDFIVALMHVGTSLMPKGLVKLIEHVVGYTPSFDKGLSLLSGCCSTKGMRRPCAVAVLELLVFRERR---VSTASIHRVGGGGAGAEMMARAVALDNAQGALESFYASFPVVPLLSVAHAKALQTSGEYEEAYDLCLMAQKVVDESVEKGDGMGPAHDPHVLWLQLAFSSFFLQRWSRALDVFTRIVEGVTQACENDKRGLTGFSAAYAAASTCGVQPVKQGEVHKLIDV 1845          
BLAST of mRNA_H-paniculata_contig4395.11137.1 vs. uniprot
Match: A0A6H5KT18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT18_9PHAE)

HSP 1 Score: 578 bits (1491), Expect = 3.640e-173
Identity = 370/719 (51.46%), Postives = 452/719 (62.87%), Query Frame = 0
Query:  673 AAVVEEGVSSTD-ENGTGVTTPVTTPMDKDQALELDIPYASVVSAETDVAVTLDAAPTPLSQRERDENVLRAHLASWRFCFHEAAALLTPVLGAGNVETPHGGVSETAAREVDSGTAGGANGGLA--TAGGFLVAPSEEIDLQSELWGKLVQAEALMLQTMLSMSSGATKDTVAACQAVSETLEVSLPSSQNKSTLQEEIAIKLAGAADVVRSKSPN-ARAAPPEALAAVSVAPTLAEQVSWRSVLIELEVLMVRVAMQLMAGQVIKAAATIRKVIKGSHWLLQAIEQDTKAAKKSRDKAQAAAAG-GVGLLQSLFFNKK---PSIPANAAPTPRPGQRSDGSRDASGL--GKNSVNGGSSGPQ------SNGEGGAGAHSLIEEAVPDDFAGRSWEGYLHHVNFLVALLHVGTSLMPKNLIKILGHYLGYTPSFERGLSLLASCCNKRGMRRPCAAAVLELLVFREVS------------KPA-------------------------LGSAGXXXXXXXXARD----------------------------------------------------EAVARATALDTAQVALESFYSKFPVVPLLSVPHAKALQASGEFEEAYELCLMAQEVVDQSVLKGEGMGPAHDPHILWLQLAQSSFFLQRWERALDFFTRIVEGVSRVCEKDQRGMTGLSAAYAAASMCGVLPVKQEKIHKLM 1286
            AA VE+G ++ D  +G G         D   A        S +  E   +  LD  P PL+Q ERDEN+LRAHLASWRFCFHEAAALLTPVLGAG VETP+G V             GG NGG +    GGF+V+ +EE+DL SELW KLVQAEALMLQTMLS+SSGA KDT+AAC+AVSE LEVSLP S+++ T++++IA KLA AA+V R   P  + +A  +A  AVS+ PTLAEQ    S+LIELEVLMVRVAMQLMAG ++KAA++ RK +K S+WLL+A + D K AK++RDKA AAAA  GVG++QS FF +K   P+ PA A    R   R+   +   GL  G+   + G SGP       + G     ++ LIE AVP +FAGR W GYLHHV+F+VAL+HVGTSLMPK L+K++   +GY PSF++GLSLL+ CC+ +GMRRPCA AVLELLVFRE+             KPA                          G A      XXX                                                       E +ARA ALD AQ AL+SFY+ FPVVPLLSV HAKALQ SGE+EEAYELC++AQ+VVD+SV KG+GMGPAHDPH+LWLQL  SSFFLQRW  ALD FTRIVEGV++ CE D+RG+TG SAAYAAASMCGV PVKQ ++HKL+
Sbjct: 1528 AAAVEDGATTKDVADGGGALEVSIRAKDGVVAXXXXXXXXSELPEEVATSAVLDFPP-PLTQAERDENILRAHLASWRFCFHEAAALLTPVLGAGYVETPNGTVG------------GGRNGGDSGPIGGGFMVSSTEEVDLHSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEVSLPPSRSRETVRDDIAFKLAAAAEVTRPSRPGGSSSASQDAYEAVSLPPTLAEQ----SLLIELEVLMVRVAMQLMAGHMLKAASSTRKFLKTSNWLLKAKDTDFKTAKRARDKAAAAAASSGVGIIQSFFFKQKAPAPARPAAAVAAGRSSARAVNGKANGGLANGRKRSDSGRSGPSRFLNGCAQGAADEESYRLIEGAVPTEFAGRDWVGYLHHVDFIVALMHVGTSLMPKGLVKLIEQMVGYAPSFDKGLSLLSGCCSTKGMRRPCAVAVLELLVFRELKRETKLMKAAKAVKPASSRVPQNGGDDSAVSGKRGFRRRIQFGQAAAVCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGXXXXXXGAEMMARAVALDNAQGALDSFYASFPVVPLLSVAHAKALQTSGEYEEAYELCVVAQKVVDESVEKGDGMGPAHDPHVLWLQLGFSSFFLQRWSPALDAFTRIVEGVTQACENDKRGLTGFSAAYAAASMCGVQPVKQGEVHKLI 2229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4395.11137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMA1_ECTSI4.940e-18659.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT18_9PHAE3.640e-17351.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 433..453
NoneNo IPR availableCOILSCoilCoilcoord: 951..971
NoneNo IPR availableCOILSCoilCoilcoord: 391..418
IPR019412Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39PFAMPF10300DUF3808coord: 820..1245
e-value: 1.5E-10
score: 40.4
IPR019412Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39PANTHERPTHR31859FAMILY NOT NAMEDcoord: 818..1245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4395contigH-paniculata_contig4395:311..15738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4395.11137.1mRNA_H-paniculata_contig4395.11137.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4395 311..15738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4395.11137.1 ID=prot_H-paniculata_contig4395.11137.1|Name=mRNA_H-paniculata_contig4395.11137.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1289bp
RCSTTTKLTANALKKLGPSSRSPALAAPEARESNDCSLASKPSQGYWGQH
APMKSMSSNGGASQTEPGTRERSATEDSQVRPNRRRTGSGDAEIPLPSEG
SRGGGEVVVPQQDLAGTAAAAIRSAMLHRHDSAASRETAATTVSSSSHVF
RTVSSVSTVRTSTDMTDGAPAAVVPQPSEKRPSSTVEQLHAKAGAMTRRL
TPGNGSGGRLSLGGVVDVSQRAVQSAQAAQATLKRFKAGGGTEVDGKAGG
APRDVTDERIKHVHRFTDTRARGQARARIETRANVEVKEKGDGKGKSKAT
TAEARKVTASPPPPPLPPLPLPEAAPPTGKMLQEKQAAGLEAPVAERVEG
PVRSSRDKKKGLTVAAAQLEPEARARAVAEADTVTIAQRRRQQADADAAA
AETRKQKLAEVHAAEERRRALLSGEAERERAGLLKAKAEMEARRSRVSRV
ERQEKEKGVRKAKAAAAAAMAAALATAAKLEKDKDQESHADKGQENGLMK
KGRTQWMAPSSGYSLWAPNTPRQEPSATVAGEPRETVSFNRGGVSGAAKV
DSRTTAAPRSISSSTNSNGVAGGSKQPVASSDGKAAPEQSFSSGRSVLSV
TKVGSHAATVAPFATTDSNVASGDPRPRPASFDAKPTATTKPTAAAKPTV
STMSPPKSVKGNTSNPVIAIPTAAVVEEGVSSTDENGTGVTTPVTTPMDK
DQALELDIPYASVVSAETDVAVTLDAAPTPLSQRERDENVLRAHLASWRF
CFHEAAALLTPVLGAGNVETPHGGVSETAAREVDSGTAGGANGGLATAGG
FLVAPSEEIDLQSELWGKLVQAEALMLQTMLSMSSGATKDTVAACQAVSE
TLEVSLPSSQNKSTLQEEIAIKLAGAADVVRSKSPNARAAPPEALAAVSV
APTLAEQVSWRSVLIELEVLMVRVAMQLMAGQVIKAAATIRKVIKGSHWL
LQAIEQDTKAAKKSRDKAQAAAAGGVGLLQSLFFNKKPSIPANAAPTPRP
GQRSDGSRDASGLGKNSVNGGSSGPQSNGEGGAGAHSLIEEAVPDDFAGR
SWEGYLHHVNFLVALLHVGTSLMPKNLIKILGHYLGYTPSFERGLSLLAS
CCNKRGMRRPCAAAVLELLVFREVSKPALGSAGGGGGGAGGARDEAVARA
TALDTAQVALESFYSKFPVVPLLSVPHAKALQASGEFEEAYELCLMAQEV
VDQSVLKGEGMGPAHDPHILWLQLAQSSFFLQRWERALDFFTRIVEGVSR
VCEKDQRGMTGLSAAYAAASMCGVLPVKQEKIHKLMVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019412Iml2/TPR_39