prot_H-paniculata_contig43942.11136.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43942.11136.1
Unique Nameprot_H-paniculata_contig43942.11136.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length125
Homology
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BLAST of mRNA_H-paniculata_contig43942.11136.1 vs. uniprot
Match: A0A6G0WQ54_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQ54_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.880e-5
Identity = 29/94 (30.85%), Postives = 51/94 (54.26%), Query Frame = 0 
Query:   20 VCDNGATKHMTSDPNFLCSYQECKGRVRLADGKHLPIEGVGVLFISFRFDSKGVLLMKFTQVAHVPLLSHHLPSLGRFADSGDEYRFSRKGLRI 113
            + D+GAT H   D ++  + +   G+VR+A+G  + IEG G + +     S G++ ++ T V ++P +  +L SL R    G   +FS+ G  I
Sbjct:  233 ILDSGATDHYCKDISWFTTLEPFTGKVRVANGDDMNIEGRGTIELEMNTPS-GIVPIRMTDVMYIPSIQFNLFSLSRVIRYGFCTKFSKHGCII 325
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43942.11136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6G0WQ54_9STRA4.880e-530.85Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43942contigH-paniculata_contig43942:650..1024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43942.11136.1mRNA_H-paniculata_contig43942.11136.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43942 2..1211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43942.11136.1 ID=prot_H-paniculata_contig43942.11136.1|Name=mRNA_H-paniculata_contig43942.11136.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MSVHLEGLEYREVEGIEIWVCDNGATKHMTSDPNFLCSYQECKGRVRLAD
GKHLPIEGVGVLFISFRFDSKGVLLMKFTQVAHVPLLSHHLPSLGRFADS
GDEYRFSRKGLRINLKTGRVLCAE*
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