mRNA_H-paniculata_contig4391.11133.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: D7FS75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS75_ECTSI) HSP 1 Score: 204 bits (519), Expect = 7.530e-58 Identity = 138/250 (55.20%), Postives = 167/250 (66.80%), Query Frame = 1
Query: 166 MKVALIVATTVAVGSSIVSSEKNFAFVGAPRARLGAAKAMRSRSTSRLQMKLWDFGLDREKITGPSQVDNNWKAQQAILKRRNNKTEMAKYKAKVDESRKKSEDKQAKWSWQNRVDGKDPLLSWKKMKANGDIDDVYDEDELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKKKGAPSEPATGTKKINAKPKSAVRKTAASTKITKAKAEGTPKAKKGWW 915
MKVA + + S+ +++ FV P G + ++ S+S +QMKLWDFGL+RE ITGPSQVD NWKAQQ +LKRRNNK M KYK+KV+E R +++ K KW WQ DPL++WKKMK+ G ID+VY+E E EGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYV DEA KK+G++FG+ KK+ A PKSA +K A K A E PK K GWW
Sbjct: 1 MKVAALALVATSTASA---AQQQSCFV--PSVGGGLRPSSKTTSSS-MQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSKVNEKRAQADAKANKWKWQTEKSSFDPLVAWKKMKSEGKIDEVYEEGENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKEET----------AEAAPKSAAKKGAKGKKPAPA-TEAKPK-KTGWW 232
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A835Z067_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z067_9STRA) HSP 1 Score: 133 bits (335), Expect = 7.430e-32 Identity = 97/186 (52.15%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 367 VDNNWKAQQAILKRRNNKTEMAKYKAKVDESRKKSEDKQAKWSWQNRVDGKDPLLSWKKMKANGDIDDVYDEDELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKKKGAPSEPATGTKKINA-KPKSAVRKTAAS--TKITKAKAEGTPKAKKGWW 915
+D ++ QQ IL RR NK +M +YK +V+ +R +++K +W+WQ R DGKDPL W+KM+A G I DVY+E E EGGIPIP ASFGVGG XXXXXXXXXXXXXDLRLPY DQGYV D++ D +G FG KKK P+ PA +K+ +A KP + K A A P+ KKGW+
Sbjct: 48 MDAAFRDQQEILARRRNKNKMEEYKKQVEANRAVADEKVTRWAWQRRSDGKDPLTDWQKMRAEGKIPDVYEEGENQEGGIPIPSASFGVGGXXXXXXXXXXXXXXDLRLPYVDQGYV--DDSADV-MGKFFGGGKKK-KPAAPAPASKQASAAKPAAPTNKFGAKKPAPAVPPAAAPAPEKKKGWF 229
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A7S2AW55_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AW55_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.320e-24 Identity = 81/158 (51.27%), Postives = 101/158 (63.92%), Query Frame = 1
Query: 322 WDF-GLDREKITGPSQVDNNWKAQQAILKRRNNKTEMAKYKAKVDESRKKSEDKQAKWSWQNRVDGKDPLLSWKKMKANGDIDDVYDEDELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKKKGAPSE 792
WDF G EK ++ + QQAIL RR NK + +Y V+++R KS++++ W +Q R DG+DPL+ WKK+K+ G I + DE GGIPIPMASFGVGG XXXXXXXXXX DLRLPYADQGYV ED +G +FG RK K E
Sbjct: 69 WDFFGESPEK---KAEKEAQLAEQQAILSRRRNKGKQQEYFENVEKNRAKSDEERKMWKFQTRTDGEDPLVEWKKLKSEGKIKKLK-RDEGPGGGIPIPMASFGVGGEXXXXXXXXXXERFDLRLPYADQGYVDEDA---DVMGKLFGKRKAKAEVPE 219
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A7R9VP76_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VP76_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.940e-24 Identity = 90/195 (46.15%), Postives = 114/195 (58.46%), Query Frame = 1
Query: 352 TGPSQVDNNWKAQQAILK-RRNNKTEMAKYKAKVDESRKK-SEDKQAKWSWQNRV--DGKDPLLSWKKMKANG---DIDDVYDEDELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKKKGAPSEPATGTKKINAKPKSAVRKTAASTKITKAKAEGTPKAKKGWW 915
+G ++D W+ QQ ILK RR + E KY KV+E R K S++++ W+WQ++ G+DP+ WKK +A+G D+DD Y E + V GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYA+QGYV ED K+G+ FG +KKK AP PK KKGWW
Sbjct: 76 SGRDRLDEEWEKQQEILKNRRAPREEREKYFQKVEERRMKASKEQKDMWAWQSKSYKKGEDPIDEWKKRRASGQISDLDDQYGEPDKV-GGIPLPMASFGVGGEXXXXXXXXXXXXXXLRLPYAEQGYVDEDSDVMGKIGSFFGGKKKKMAPEXXXXXX-------------------------XXXPKKKKGWW 244
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A7R9ZRA3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRA3_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.460e-23 Identity = 85/172 (49.42%), Postives = 114/172 (66.28%), Query Frame = 1
Query: 289 SRSTSRLQMKLWDFGLDREKITGPSQVDNNWKAQQAILKRRNN-KTEMAKYKAKVDESRKKSEDKQAK-WSWQNRV--DGKDPLLSWKKMKANGDIDDVYDE--DELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKKKGAP 786
S ST++L+M +D + +G +D W+AQQ ILKRRN K E Y AK+++ R+++ KQ W+WQ++ G+DP+ WKK + +G I D+ D+ D GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYA+QGYV +D + +G +FG KKK AP
Sbjct: 32 SHSTTQLRMGWFDNNF-KAGGSGRDDLDEQWEAQQEILKRRNKPKAERDAYFAKIEDRREEASKKQNDMWAWQSKSYKKGEDPIDEWKKRRKSGQISDLNDQYGDPKKVGGIPMPMASFGVGGEXXXXXXXXXXXXXXLRLPYAEQGYVDDDADF---MGKLFGKNKKKQAP 199
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A7S2SJC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJC5_9STRA) HSP 1 Score: 105 bits (263), Expect = 4.890e-22 Identity = 87/219 (39.73%), Postives = 123/219 (56.16%), Query Frame = 1
Query: 151 RRAFAMKVALIVATTVAVGSSIVSSEKNFAFVGAPRARLGAAKAMRSRSTSRLQMKLWDFGLDREKITGPSQVDNN-WKAQQAILKRRNNKTEMAKYKAKVDESRKKSEDKQAKWSWQNRVDGKDPLLSWKKMKANGDIDDVYDEDELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKKKGAPSEPATG 804
RR +V ++ AVG AFV AP L AK R ++ R ++G+ +K + + +AQ+ IL RR +K+++ +Y V+ R++S++ + WS+Q +DPL+ WK+++ G I D+ E + EGGIPIP+ SFGVGGSXXXXXXXXX DLRLPYA+QGYV ED KLG MF F + K PS + G
Sbjct: 30 RRRMVPRVGFLLCLCAAVG----------AFVPAPAGGLLQAKGARGQAIRR------EWGIFGDKSEEKKREEEEAMQAQREILARRKSKSKVDEYFKDVETRRRQSDEDRKIWSFQTDTK-QDPLIKWKQLRQEGKIKDLKREGQ--EGGIPIPLPSFGVGGSXXXXXXXXXGERFDLRLPYAEQGYVDEDADVMGKLGRMFSFGRGKEGPSSDSDG 229
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A7S2A710_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A710_9STRA) HSP 1 Score: 106 bits (264), Expect = 7.740e-22 Identity = 85/162 (52.47%), Postives = 101/162 (62.35%), Query Frame = 1
Query: 319 LWDFGLDREKITGPSQVDNNWKAQQAILKRRNNKT-EMAKYKAKVDESRKKSEDKQAK-WSWQNR--VDGKDPLLSWKKMKANGDIDDVYDE--DELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKKKGAP 786
L+ FG K ++D W+AQQ ILKRR E KY ++E R ++ KQ W WQ + G+DPL WKK +A G+I D+ ++ D GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYADQGYV ED KLGN F KKK AP
Sbjct: 95 LYFFGQGSNK----DKLDEEWEAQQEILKRRRAPAAEREKYFEAIEERRAEASKKQNDMWGWQTKKYAKGEDPLDEWKKRRATGEISDLDNQYGDPKKVGGIPLPMASFGVGGEXXXXXXXXXXXXXXLRLPYADQGYVDEDADVMAKLGNFFSGGKKKKAP 252
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A7S2K8B2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8B2_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.520e-21 Identity = 102/231 (44.16%), Postives = 139/231 (60.17%), Query Frame = 1
Query: 103 PIVHRKLPSHLQIY*SRRAFAMKVALIVATTVAVGSSIVSSEKNFAFVGAPRARLGAAKAMRSRSTSRLQMKLWDFGLDREKITGPSQVDNNWKAQQAILKRRNN-KTEMAKYKAKVDESRKKSE-DKQAKWSWQNRV--DGKDPLLSWKKMKANG---DIDDVYDEDELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKK 774
P VH P + I MK ALI ATT+A +S + AF AP + + + + +TS L+M L+D + +G + D ++ QQ IL+RR + E Y V++ R+++ D+Q KW+WQ + G+DP+ WKK +A+G D+DD Y E+E +GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYADQGYV ED + KL +MF +KK
Sbjct: 4 PAVHSTSPIDIII--------MKNALI-ATTIAFSAS-----QGIAF--APSNNVRSNGLIAASTTSSLKMGLFDNWVAGG--SGKDRRDEEFEKQQEILRRRRAPQAERDAYFNTVEKRRQQASIDQQDKWAWQTKTYKKGEDPIDEWKKRRASGQISDLDDQYGEEEK-KGGIPMPMASFGVGGEXXXXXXXXXXXXXXLRLPYADQGYVDEDADFMGKLTSMFTGKKK 215
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A7S3P2V2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P2V2_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.600e-21 Identity = 79/148 (53.38%), Postives = 98/148 (66.22%), Query Frame = 1
Query: 367 VDNNWKAQQAILKRRNNKTEMAKYKAKVDESRKKSEDKQAK-WSWQNRVDGK--DPLLSWKKMKANGDIDDVYDE--DELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFGFRKKKGAPSEP 795
+D W+ QQ IL R + T+ Y KV+E+RK++ KQ++ WSWQ + GK DP+ W+K +A+G I D+ ++ D GGIPIP ASFGVGG XXXXXXXXXXXXX LRLPYADQGYV ED KL + FG KKK EP
Sbjct: 63 LDEQWQRQQEILANRRDPTKTKAYFDKVEENRKEASRKQSEMWSWQTKKYGKGEDPIDEWRKRRADGSISDLENQYGDPKKIGGIPIPGASFGVGGXXXXXXXXXXXXXXXLRLPYADQGYVDEDSDVMGKLASFFGGGKKKEPEPEP 210
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Match: A0A448YZQ2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZQ2_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.400e-20 Identity = 86/177 (48.59%), Postives = 112/177 (63.28%), Query Frame = 1
Query: 253 PRARLGAAKAMRSRSTSRLQMKLWDFGLDREKITGPSQVDNNWKAQQAILK-RRNNKTEMAKYKAKVDESRKKSE-DKQAKWSWQNRV--DGKDPLLSWKKMKANG---DIDDVYDEDELVEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVVEDEAWDKKLGNMFG 762
P GA + S+S+L M L+D + G +D ++ QQAIL RR K+E KY KV+E R++++ ++Q W WQ + G+DP+ WKK + +G D+DD Y + + + GGIP+PMASFGVGG XXXXXXXXXXXXXDLRLPYADQGYV ED KL N FG
Sbjct: 38 PHTXAGATRV----SSSQLGMGLFD--RFQAGGNGRESLDEEFEKQQAILAARRAPKSERDKYFEKVEERRRRADKERQDNWGWQTKQYKKGEDPINEWKKRRESGTISDLDDQYGDAKKI-GGIPLPMASFGVGGEXXXXXXXXXXXXXDLRLPYADQGYVDEDADVMGKLSNFFG 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4391.11133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4391.11133.1 >prot_H-paniculata_contig4391.11133.1 ID=prot_H-paniculata_contig4391.11133.1|Name=mRNA_H-paniculata_contig4391.11133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp MKVALIVATTVAVGSSIVSSEKNFAFVGAPRARLGAAKAMRSRSTSRLQMback to top mRNA from alignment at H-paniculata_contig4391:86..11541+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4391.11133.1 ID=mRNA_H-paniculata_contig4391.11133.1|Name=mRNA_H-paniculata_contig4391.11133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11456bp|location=Sequence derived from alignment at H-paniculata_contig4391:86..11541+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4391:86..11541+ >mRNA_H-paniculata_contig4391.11133.1 ID=mRNA_H-paniculata_contig4391.11133.1|Name=mRNA_H-paniculata_contig4391.11133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig4391:86..11541+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |