prot_H-paniculata_contig439.11131.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig439.11131.1
Unique Nameprot_H-paniculata_contig439.11131.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length355
Homology
BLAST of mRNA_H-paniculata_contig439.11131.1 vs. uniprot
Match: D7FKT5_ECTSI (Alpha-L-fucosidase, family GH95 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT5_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 4.910e-44
Identity = 148/390 (37.95%), Postives = 180/390 (46.15%), Query Frame = 0
Query:    1 GYIRHLHLNNGTAEASFHS----------------TTEGSGSSRRIHSREAFASNVDGVLAMRYRCVEEDGGQGCLGLQLTPKRQGSSHNTEAWQLPPLSDLQTEKEGQEKTDHHQSRHGAGAYVGVFRLPG--GPKAEMGFHMCVAVFPSGNGGSLGLGRVGTGS-VLTEEFELPVKTGAAAAERPGRRHDRDGLIHGLDDADRVKREL-------TPGGMPPAR------RRSRRDVRGGDS---ALPGDPALAKRKGHRISLPESFQVEEALVLVAIVTEDIVTLKARGEHKGWATTQLEQEQGVQRSEMHRHRVAPGTAGRSAEGGARTGGITTEETPVNEHTADNLLRSSCINRLQAAAGMGFDHLQRRHVHDVETLFGRVELTL 355
            GYIRHLHLNNGTAEA+F S                 + G    R +H REAFASNVDGVLAMR  C EE+ G+GCL L  TPKRQG SH T A +LP                      GAGAYVG++R  G  G KAEMGFH+CVAVFPS          VG GS V+TEE+  P          P  RH  +G      D +  + +L        PGG PPAR      R +    RGG S   A    P       HRI+L  +    EA++LV++VTE+    KAR +                                  +G   T G                LR  C+ R++AAAG+GF+ L+RRHV DVE LF RV  +L
Sbjct:  386 GYIRHLHLNNGTAEATFSSKGPPDSGGFGLGLGFGASRGQRERRLVHHREAFASNVDGVLAMRLSCKEEESGRGCLSLVATPKRQGKSHFTTAGRLPXXXXXXXXXXXXXXAGGDTVGWGAGAYVGLYRPSGRNGEKAEMGFHVCVAVFPS----------VGEGSGVVTEEYVDP--------SSPRERHRPEGPA---GDKETPEEKLMMARLADAPGG-PPARNAGMMARLAEGPSRGGPSQGNAGQAPPTRNPTPRHRIALSAAEASSEAMMLVSVVTEE----KARDD----------------------------------DGDDETEG----------------LRRRCLARVEAAAGLGFEELRRRHVEDVEGLFDRVHFSL 699          
BLAST of mRNA_H-paniculata_contig439.11131.1 vs. uniprot
Match: A0A6H5K8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P7_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.260e-17
Identity = 100/308 (32.47%), Postives = 128/308 (41.56%), Query Frame = 0
Query:   65 TPKRQGSSHNTEAWQLPPLSDLQTEKEGQEKTDHHQSRHGAGAYVGVFRLPG--GPKAEMGFHMCVAVFPSGNGGSLGLGRVGTGS-VLTEEFELPVKTGAAAAERPGRRHDRDGLIHGLDDADRVKRELT-----PGGMPPARR------RSRRDVRGGDS---ALPGDPALAKRKGHRISLPESFQVEEALVLVAIVTEDIVTLKARGEHKGWATTQLEQEQGVQRSEMHRHRVAPGTAGRSAEGGARTGGITTEETPVNEHTADNLLRSSCINRLQAAAGMGFDHLQRRHVHDVETLFGRVELTL 355
            TP RQG SH TE  +LP                   +  GAGAYVG++R  G  G KAEMGFH+CVAVFPS          VG GS V+ EE+  P          P +RH  +G   G ++    K  +      PGG P AR              GG +   A    P       HRISL  +    EA++LV++VTE+    KAR                                                +   N+ T    LR  C+ R++AAAG+GF+ L+RRHV DVE LF RV L+L
Sbjct:   45 TPNRQGKSHFTEGGRLPXXXXXXXXXXXXXXAGGDTAGWGAGAYVGLYRPSGRNGEKAEMGFHVCVAVFPS----------VGEGSRVVAEEYVDP--------SSPRQRHRPEGPA-GDEETPEEKLMMARLADAPGGAP-ARNVGMXXXXXXXXXXGGPAQGNAGQAPPTRNPTPRHRISLSAAEASSEAMMLVSVVTEE----KAR------------------------------------------------DNDGNDETEG--LRRRCLGRVEAAAGLGFEELRRRHVEDVEGLFDRVHLSL 278          
BLAST of mRNA_H-paniculata_contig439.11131.1 vs. uniprot
Match: A0A6H5K0Q6_9PHAE (GH95 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q6_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 3.100e-12
Identity = 43/78 (55.13%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 GYIRHLHLNNGTAEASFHS------------------TTEGSGSSRRIHSREAFASNVDGVLAMRYRCVEEDGGQGCL 60
            GYIRHLHLNNGTAEA+F S                  T+ G    R +H REAFASNVDGVLAMR  C EE+ G+GCL
Sbjct:  307 GYIRHLHLNNGTAEATFSSKGPPDSGGFGLXXXXXXXTSRGQREGRLVHRREAFASNVDGVLAMRLSCKEEESGRGCL 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig439.11131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKT5_ECTSI4.910e-4437.95Alpha-L-fucosidase, family GH95 n=1 Tax=Ectocarpus... [more]
A0A6H5K8P7_9PHAE2.260e-1732.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0Q6_9PHAE3.100e-1255.13GH95 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig439contigH-paniculata_contig439:27681..31432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig439.11131.1mRNA_H-paniculata_contig439.11131.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig439 27681..31434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig439.11131.1 ID=prot_H-paniculata_contig439.11131.1|Name=mRNA_H-paniculata_contig439.11131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp
GYIRHLHLNNGTAEASFHSTTEGSGSSRRIHSREAFASNVDGVLAMRYRC
VEEDGGQGCLGLQLTPKRQGSSHNTEAWQLPPLSDLQTEKEGQEKTDHHQ
SRHGAGAYVGVFRLPGGPKAEMGFHMCVAVFPSGNGGSLGLGRVGTGSVL
TEEFELPVKTGAAAAERPGRRHDRDGLIHGLDDADRVKRELTPGGMPPAR
RRSRRDVRGGDSALPGDPALAKRKGHRISLPESFQVEEALVLVAIVTEDI
VTLKARGEHKGWATTQLEQEQGVQRSEMHRHRVAPGTAGRSAEGGARTGG
ITTEETPVNEHTADNLLRSSCINRLQAAAGMGFDHLQRRHVHDVETLFGR
VELTL
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