prot_H-paniculata_contig439.11127.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig439.11127.1
Unique Nameprot_H-paniculata_contig439.11127.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length313
Homology
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BLAST of mRNA_H-paniculata_contig439.11127.1 vs. uniprot
Match: D7FKT8_ECTSI (TLC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT8_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 4.230e-148
Identity = 216/306 (70.59%), Postives = 257/306 (83.99%), Query Frame = 0 
Query:    8 DVLSWRRGWIPSAICIAGGYLFLPL--LGPQAREEGWTRGVASFVGFEALRVAAVGLLPYWWKEIAGRTEPLKDMSREQFGGQLNSLMLSSYLTWSIIRWDWRLTWKLPFVETVGEDHTGVVYHLMVMMLAYIVHDTWHLLRSWKVNRNRVMLIHHAVFAVISIMGMRFMQLPVHMRIHFILFSAEASTPLLNGRWLMRHIGLVDKGHLLMKITSISFLLLFMTTRVMMYLFLIVDLIDIHAELIMPLPLKPLFLLVVLISYAVNVYWASLIVGALFKKEGKVGRREGPTLTINREKSAVDQQKKT 311
            DVLSW+RGWIPSAI ++   LFLPL  +G +A E GW RG+A+FV  E +RV AVGLLPYWW+EIA RT PL D SREQFGGQL SL++SSYLTWSIIRWDW+LT KLPF++TVGEDHTGVV+ LM +ML+YIVHDTWHL+RSW+VNRNRVMLIHH VFAVISIMGMRF QLP+HMRIHFI+FSAE STPLLNGRWLMRHIGLV K H++M  TS SFL+LF+ TR+M+YLF+I+D+I ++AELIMP+PL+ +FL  V++SY VN+YWA LI+GALF  EGK  RR GPTLT+N      D QKK+
Sbjct:  131 DVLSWKRGWIPSAIAVS--LLFLPLESVGLEAFEPGWERGIAAFVALEVVRVGAVGLLPYWWREIARRTGPLTDRSREQFGGQLTSLLVSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFSLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALFGNEGK--RRGGPTLTVNH----PDTQKKS 428
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BLAST of mRNA_H-paniculata_contig439.11127.1 vs. uniprot
Match: A0A6H5K373_9PHAE (TLC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K373_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 2.220e-145
Identity = 212/306 (69.28%), Postives = 254/306 (83.01%), Query Frame = 0 
Query:    8 DVLSWRRGWIPSAICIAGGYLFLPL--LGPQAREEGWTRGVASFVGFEALRVAAVGLLPYWWKEIAGRTEPLKDMSREQFGGQLNSLMLSSYLTWSIIRWDWRLTWKLPFVETVGEDHTGVVYHLMVMMLAYIVHDTWHLLRSWKVNRNRVMLIHHAVFAVISIMGMRFMQLPVHMRIHFILFSAEASTPLLNGRWLMRHIGLVDKGHLLMKITSISFLLLFMTTRVMMYLFLIVDLIDIHAELIMPLPLKPLFLLVVLISYAVNVYWASLIVGALFKKEGKVGRREGPTLTINREKSAVDQQKKT 311
            DVLSW+RGWIPSAI ++   LFLPL  +G +  E GW RG+A+FV  E +RV AV LLPYWW+++A RT PL D SREQFGGQL SL++SSYLTWSIIRWDW+LT KLPF++TVGEDHTGVV+ LM +ML+YIVHDTWHL+RSW+VNRNRVMLIHH VFAVISIMGMRF QLP+HMRIHFI+FSAE STPLLNGRWLMRHIGLV K H++M  TS SFL LF+ TR++MYLF+I+D+I ++AELIMP+PL+ +FL  V++SY VN+YWA LI+GALF  EGK  RR GPTLT+N      D QKK+
Sbjct:  151 DVLSWKRGWIPSAIAVS--LLFLPLESVGLEVFEPGWERGIAAFVALEVVRVGAVALLPYWWRDVARRTGPLTDRSREQFGGQLTSLLVSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFSLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLALFLVTRILMYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALFGNEGK--RRGGPTLTVNH----PDTQKKS 448
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig439.11127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKT8_ECTSI4.230e-14870.59TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K373_9PHAE2.220e-14569.28TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 80..286
e-value: 0.0023
score: 18.6
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 93..278
e-value: 3.9E-14
score: 52.9
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 80..286
score: 14.123
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 124..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 258..282
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 283..312
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 239..257
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..45
NoneNo IPR availableTMHMMTMhelixcoord: 223..245
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 15..33
NoneNo IPR availableTMHMMTMhelixcoord: 158..175
NoneNo IPR availableTMHMMTMhelixcoord: 124..146
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
NoneNo IPR availableTMHMMTMhelixcoord: 260..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig439contigH-paniculata_contig439:3207..5340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig439.11127.1mRNA_H-paniculata_contig439.11127.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig439 2088..9815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig439.11127.1 ID=prot_H-paniculata_contig439.11127.1|Name=mRNA_H-paniculata_contig439.11127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bp
MSDGDDGDVLSWRRGWIPSAICIAGGYLFLPLLGPQAREEGWTRGVASFV
GFEALRVAAVGLLPYWWKEIAGRTEPLKDMSREQFGGQLNSLMLSSYLTW
SIIRWDWRLTWKLPFVETVGEDHTGVVYHLMVMMLAYIVHDTWHLLRSWK
VNRNRVMLIHHAVFAVISIMGMRFMQLPVHMRIHFILFSAEASTPLLNGR
WLMRHIGLVDKGHLLMKITSISFLLLFMTTRVMMYLFLIVDLIDIHAELI
MPLPLKPLFLLVVLISYAVNVYWASLIVGALFKKEGKVGRREGPTLTINR
EKSAVDQQKKTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom