prot_H-paniculata_contig43894.11125.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43894.11125.1
Unique Nameprot_H-paniculata_contig43894.11125.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
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BLAST of mRNA_H-paniculata_contig43894.11125.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.820e-8
Identity = 34/69 (49.28%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:   41 IRGVHQELPVHCLCLRNQDNFKGFLXXXXXXXXXXHGRVNRVPGITTFSAFRVENHG-GQVLVIFKRYM 108
            +R  + E+PV C  LRN+ NFKG L           GRVNRVP ITT+ AFRVE  G G+V V  K++M
Sbjct:  292 LRASYTEVPVFCSTLRNEGNFKGLLI----------GRVNRVPNITTYRAFRVEKGGDGRVKVRVKKHM 350
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BLAST of mRNA_H-paniculata_contig43894.11125.1 vs. uniprot
Match: A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.260e-5
Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 0 
Query:   41 IRGVHQELPVHCLCLRNQDNFKGFLXXXXXXXXXXHGRVNRVPGITTFSAFRVENHG-GQVLVIFKRYM 108
            ++  + E+PV C  L N+ NF G L           GRVNRVP ITT+ AFRVE  G G+V V  K +M
Sbjct:   89 LQASYTEVPVFCSTLGNEGNFNGLL----------QGRVNRVPDITTYRAFRVEKGGDGRVKVRVKHHM 147
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43894.11125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUU1_9PHAE4.820e-849.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCW3_9PHAE1.260e-544.93Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43894contigH-paniculata_contig43894:312..1041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43894.11125.1mRNA_H-paniculata_contig43894.11125.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43894 312..1043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43894.11125.1 ID=prot_H-paniculata_contig43894.11125.1|Name=mRNA_H-paniculata_contig43894.11125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
NCFIGYAGNWWRRMSSAKFLQGSPLASREKYLHEIAVIYCIRGVHQELPV
HCLCLRNQDNFKGFLRNQDNFKGFLHGRVNRVPGITTFSAFRVENHGGQV
LVIFKRYMTSSGV
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