mRNA_H-paniculata_contig43893.11124.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.080e-33 Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEPKTDHGWVGLRRNFGGDDGHEAES 731
KG YLLVDNGYH+W L+PPSK + + +SK LESVRKDVE FFG++K RILKL I Y ++E I+NVFF CCILHNMLH++D +EE+ +WAG + P D VG + + + E ES
Sbjct: 81 KGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVES 215
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.380e-33 Identity = 64/122 (52.46%), Postives = 85/122 (69.67%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEPKTDHGWVGLR 692
KG Y+LVDNGYH+W +L+ PSK L++ + +SK LESVRKDVE FFG+LK R+RIL L + ++ +E+I+NVFF CCILHNMLH D +D L E+ +W V EP+ D G VG +
Sbjct: 124 KGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTK 245
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 134 bits (338), Expect = 2.290e-33 Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEPKTDHGWVGLR 692
+G +L++DN YHEW L+ PSK ++++T +S+ LESVRKDVE FFG+LK R RILKL + Y ++E I+N+FF CCILHNMLH D LDV +E+ DW G D +P TD+ VG +
Sbjct: 81 RGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSK 202
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 137 bits (346), Expect = 1.250e-32 Identity = 68/135 (50.37%), Postives = 87/135 (64.44%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEPKTDHGWVGLRRNFGGDDGHEAES 731
KG YLLVDNGYH+W L+PPSK + + +SK LESVRKDVE FFG++K R RILKL I Y ++E I+NVFF CCILHNMLH++D +EE+ +WAG + P D VG + + + E ES
Sbjct: 322 KGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVES 456
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 135 bits (341), Expect = 4.300e-32 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 3
Query: 294 DSSTRTAHGWNKGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAG 626
D +T T KG YL+VDNGYH+W ML+ PSK L++ + +SK LESVRKDVE FFG+LK R RILKL + Y+++E+++ VFF CCILHNMLH HD + LEED +W G
Sbjct: 286 DGTTETL----KGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVG 392
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 131 bits (330), Expect = 1.670e-31 Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEPKTDHGWVGLR 692
KG Y L DNGYH+W +L+ PSK L++++ +SK LESVRKDVE FFG+LK R RILKL + Y+ +E+I+NVFF CCILHNMLH D +D L E+ +W EP+ D G G +
Sbjct: 169 KGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTK 290
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 132 bits (331), Expect = 8.430e-31 Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEPKTDHGWVGLRRNFGGDDGHEAESDH*V 743
KG YLLVDNGYH+W +L+ PSK L++ + +SK LESVRKDVE FFG+LK R RILKL + Y+ +E+I+NVFF C ILHNMLH D +D L E+ +W EP+ D G VG + +D + E +H V
Sbjct: 279 KGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTK---DVNDQPQLEIEHTV 414
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 126 bits (317), Expect = 3.680e-29 Identity = 62/122 (50.82%), Postives = 79/122 (64.75%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEPKTDHGWVGLR 692
KG YLLVDNGYH+W +LM P+K L++ + +SK LESVRKDVE FFG+LK RI K+ + Y E+E+I+NVFF CCILHNMLH D +D L E+ W E + D VG +
Sbjct: 264 KGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAK 385
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5JP18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP18_9PHAE) HSP 1 Score: 121 bits (303), Expect = 3.780e-29 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEP 662
K +L+VD GYH W L P + + E+ +S+ LESVRKD E FGV+K R RI K+ LYR+KE+I+N+FF C ILHNML A+D +++LE D DWAG D D+ + P
Sbjct: 26 KRPWLIVDGGYHNWKQLQSPIRAPSSKAESGFSRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHP 137
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 126 bits (317), Expect = 4.740e-29 Identity = 66/133 (49.62%), Postives = 84/133 (63.16%), Query Frame = 3
Query: 327 KGVYLLVDNGYHEWAMLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREKEKINNVFFACCILHNMLHAHDVLDVLEEDADWAGVDSQRDREVAEPKTDHGWVGLRRNFGGDDGHEA 725
KG YLLVDNGYH+W L+PPSK + + +SK LES RKDVE +FG+LK R RI KL I + ++E I+NVFF CCILHNMLH+ D + E+ +WAG + +P TD+ VG D HEA
Sbjct: 247 KGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM-----DGQHEA 374 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43893.11124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig43893.11124.1 >prot_H-paniculata_contig43893.11124.1 ID=prot_H-paniculata_contig43893.11124.1|Name=mRNA_H-paniculata_contig43893.11124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp MLMPPSKRSLTDEETRWSKTLESVRKDVEFFFGVLKDRVRILKLPILYREback to top mRNA from alignment at H-paniculata_contig43893:82..1657- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig43893.11124.1 ID=mRNA_H-paniculata_contig43893.11124.1|Name=mRNA_H-paniculata_contig43893.11124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1576bp|location=Sequence derived from alignment at H-paniculata_contig43893:82..1657- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig43893:82..1657- >mRNA_H-paniculata_contig43893.11124.1 ID=mRNA_H-paniculata_contig43893.11124.1|Name=mRNA_H-paniculata_contig43893.11124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig43893:82..1657- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |