prot_H-paniculata_contig4388.11122.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4388.11122.1
Unique Nameprot_H-paniculata_contig4388.11122.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length320
Homology
BLAST of mRNA_H-paniculata_contig4388.11122.1 vs. uniprot
Match: A0A6H5L6E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E1_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 8.020e-75
Identity = 151/288 (52.43%), Postives = 197/288 (68.40%), Query Frame = 0
Query:    3 SNAFVQSRGVWNAARVAPLLSVEGLCRTAEACAAGMEDGHPLFLRLHACRALDLLSRHATKLSREGGPYGLPGAAGRAMCFARVGAAVRAAVSAAPALAAACEENSAHVVVETMTQLVKQLPAHAVGNGGARILIQMAMGMWVRHPTHGFIVEVVEDLLIALPRVPQALPHMLDTVVPCLPEVFERVRLGEIRLESVAQGALALLREVAKR---AGEFVGD-------GATSTCGGVASAEAGCCGGTSLIAVGESLLAGLRGAGPLLLQTDSHALMQEGCSTLKAFV 280
            S+ FV +RG+W  AR A LLS EG+CR+AEAC+  M +G PL LRLHACRAL +L +++ +++R GG +G+   AG+A+  +RVG A RAAV+AAP LAA  EE +AH   ETMTQLVK  PA AV  GG  +L+Q++M +W R+P+   +VE VEDLL+AL RVPQA+P M +T+VP   EVFER R GE  L++VA+G L+LLRE+  R   AG  VG        G T + GG ++A   C     L     SL AGLR A PLLL+TDSH+L+Q+GCSTL+ FV
Sbjct:  586 SSPFVHARGLWATARFASLLSAEGVCRSAEACSLAMGEGRPLCLRLHACRALRVLGQYSARIARRGGFFGIKRGAGKALLGSRVGTAARAAVTAAPGLAACFEEGTAHFAPETMTQLVKAFPAEAVAGGGDLVLMQLSMSLWRRYPSDPLVVEAVEDLLLALTRVPQAVPRMTETLVPLFQEVFERRRAGEEELQAVAEGCLSLLRELTTRLAAAGGGVGGVHSRGGAGRTDSGGGFSAAATRCDSSARL-----SLWAGLRAAFPLLLETDSHSLVQDGCSTLQEFV 868          
BLAST of mRNA_H-paniculata_contig4388.11122.1 vs. uniprot
Match: D7G8B3_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B3_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 6.150e-73
Identity = 148/290 (51.03%), Postives = 193/290 (66.55%), Query Frame = 0
Query:    3 SNAFVQSRGVWNAARVAPLLSVEGLCRTAEACAAGMEDGHPLFLRLHACRALDLLSRHATKLSREGGPYGLPGAAGRAMCFARVGAAVRAAVSAAPALAAACEENSAHVVVETMTQLVKQLPAHAVGNGGARILIQMAMGMWVRHPTHGFIVEVVEDLLIALPRVPQALPHMLDTVVPCLPEVFERVRLGEIRLESVAQGALALLREVAKRAGEFVGDGATSTCGGVASAEAGCCGGTSLIAVGE------------SLLAGLRGAGPLLLQTDSHALMQEGCSTLKAFV 280
            S+ FV +RG+W  AR A LLS EG+CR+AEAC+  M +G PL LRLHACRAL +L +++ +++R GG +G+   AG+A+  +RVGAA RAAV+AAP LAA CEE +AH   ETMTQLVK  PA AV  GG  +L+Q++M +W R+P+   +VE VEDL++AL RVPQA+P M +T+VP   EVFER+R GE  L++VA+G L+LLRE+  R     G       GGV     G  G T                   SL AGLR A PLLL+TDSH+L+Q+GCSTL+ FV
Sbjct:  660 SSPFVHARGLWATARFASLLSAEGVCRSAEACSLAMGEGRPLCLRLHACRALRVLGQYSARIARRGGFFGIKRGAGKALLGSRVGAAARAAVTAAPGLAACCEEGTAHFAPETMTQLVKAFPAEAVAAGGDLVLMQLSMSLWRRYPSDPLVVEAVEDLMLALTRVPQAVPRMTETLVPLFREVFERLRTGEEELQTVAEGCLSLLRELTTRLAAAGG-----VVGGVH--PRGAAGRTXXXXXXXXXXXXXDSSARLSLWAGLRAAFPLLLETDSHSLVQDGCSTLQEFV 942          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4388.11122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6E1_9PHAE8.020e-7552.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8B3_ECTSI6.150e-7351.03Importin N-terminal domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4388contigH-paniculata_contig4388:974..5570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4388.11122.1mRNA_H-paniculata_contig4388.11122.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4388 974..5571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4388.11122.1 ID=prot_H-paniculata_contig4388.11122.1|Name=mRNA_H-paniculata_contig4388.11122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp
GASNAFVQSRGVWNAARVAPLLSVEGLCRTAEACAAGMEDGHPLFLRLHA
CRALDLLSRHATKLSREGGPYGLPGAAGRAMCFARVGAAVRAAVSAAPAL
AAACEENSAHVVVETMTQLVKQLPAHAVGNGGARILIQMAMGMWVRHPTH
GFIVEVVEDLLIALPRVPQALPHMLDTVVPCLPEVFERVRLGEIRLESVA
QGALALLREVAKRAGEFVGDGATSTCGGVASAEAGCCGGTSLIAVGESLL
AGLRGAGPLLLQTDSHALMQEGCSTLKAFVITLSNISTTPSTNAVNTHRA
ALQGNFLAGSPGGIVCLADT
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