mRNA_H-paniculata_contig4387.11119.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: D7FX50_ECTSI (ApaG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX50_ECTSI) HSP 1 Score: 168 bits (426), Expect = 1.640e-48 Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 1
Query: 25 TSGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPIT 291
T+ RVEVRSQYYPEQSNPLKDQYIFVYKVKITNQS QTVQLVSRTWEIKA+EA+EAPQLVKGPGVVGQQPVLEPGQSFEYSSACPIT
Sbjct: 294 TTNGIRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSSQTVQLVSRTWEIKAIEATEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPIT 382
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: A0A835ZBY5_9STRA (ApaG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY5_9STRA) HSP 1 Score: 117 bits (294), Expect = 5.350e-30 Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 4 ETTGVCCTSGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASE---APQLVKGPGVVGQQPVLEPGQSFEYSSACPI 288
ET GV RVEVR+QY+PEQS+P K Q++FVY+V++TN S TVQL +R W I+ A A Q VKGPGVVGQQPVLEPGQSFEYSSACP+
Sbjct: 192 ETHGV-------RVEVRAQYFPEQSDPAKAQFVFVYRVRVTNASRATVQLAARRWHIRTANAKTGKTAVQEVKGPGVVGQQPVLEPGQSFEYSSACPV 282
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: A0A835YH08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH08_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.010e-28 Identity = 57/99 (57.58%), Postives = 74/99 (74.75%), Query Frame = 1
Query: 1 HETTGVCCTSGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASE---APQLVKGPGVVGQQPVLEPGQSFEYSSACPI 288
+ T T G RV VR+QY+PEQS+P + Q++FVY+V++TN+S TVQL +R W I+ ++A A Q V+GPGVVGQQPVLEPGQSFEYSSACP+
Sbjct: 204 YSTRSEAVTHG-VRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPV 301
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: H6WBA4_VAULI (ApaG domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA4_VAULI) HSP 1 Score: 111 bits (278), Expect = 1.230e-27 Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1
Query: 43 VEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASEAP---QLVKGPGVVGQQPVLEPGQSFEYSSACPIT 291
VEV SQY+ EQSNP K +YIF+Y+V ITN SP TVQLVSR W+I+ + + Q V GPGVVGQQP+LEPGQ FEY+SACPIT
Sbjct: 198 VEVVSQYFREQSNPTKHRYIFLYRVAITNNSPFTVQLVSRKWQIRTINPNTNKTEVQEVSGPGVVGQQPILEPGQIFEYNSACPIT 283
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: A0A1Q8AVJ3_9BACT (Protein ApaG n=3 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1Q8AVJ3_9BACT) HSP 1 Score: 100 bits (250), Expect = 2.650e-25 Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 1 HETTGVCCTSGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPI 288
H +T T+ N RVEV SQY PE+S P ++++ F Y V+ITN+ +TVQL+SR W I +A+ Q VKGPGVVG+QPVL PG+SF+Y+S CP+
Sbjct: 10 HASTSEAVTN-NVRVEVESQYAPERSQPFQNEWFFDYTVRITNERDETVQLLSRHWII--TDATGHSQEVKGPGVVGEQPVLGPGESFQYTSGCPL 102
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: A0A2E7MA55_9DELT (Protein ApaG n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7MA55_9DELT) HSP 1 Score: 97.1 bits (240), Expect = 6.600e-24 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 1
Query: 10 TGVCCTSGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPI 288
TG T+ +V V SQY P +S+P Q+ F+Y V+ITN+ TVQLVSR W I +A+ + V+GPGVVG QPVL+PGQ FEY+SACP+
Sbjct: 2 TGSEMTTRGVKVRVVSQYVPRRSSPENGQWFFIYTVRITNEGEHTVQLVSRHWII--TDANGEVEEVRGPGVVGAQPVLDPGQGFEYTSACPL 92
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: A0A2V9CFQ7_9BACT (Protein ApaG n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9CFQ7_9BACT) HSP 1 Score: 97.1 bits (240), Expect = 6.780e-24 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 1
Query: 25 TSGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPIT 291
T+ + RV V+++Y P +S+P ++Q+ F+Y V+ITN+ TVQL+SR W I +A Q V+GPGVVG QPVL PGQSFEY+S CP+T
Sbjct: 7 TTRSIRVHVKAEYDPGRSSPHQNQWFFLYTVRITNEGSNTVQLISRHWVI--TDAMGKVQEVRGPGVVGNQPVLAPGQSFEYTSGCPLT 93
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: A0A838EX98_9PROT (Co2+/Mg2+ efflux protein ApaG n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=A0A838EX98_9PROT) HSP 1 Score: 97.1 bits (240), Expect = 7.360e-24 Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 28 SGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPI 288
+ NFR+EV++ + +QSNPL QY+F Y V ITN+ + QL+SR W IK +A + V+GPGV+GQQP EPGQSFEYSS CP+
Sbjct: 9 NNNFRIEVKTNFDFDQSNPLNFQYLFRYTVLITNKGDVSAQLLSRKWNIK--DAKSEVKFVEGPGVIGQQPNFEPGQSFEYSSFCPL 93
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: UPI001FEEB164 (Co2+/Mg2+ efflux protein ApaG n=1 Tax=Flagellatimonas centrodinii TaxID=2806210 RepID=UPI001FEEB164) HSP 1 Score: 96.7 bits (239), Expect = 9.100e-24 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 22 CTSGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPI 288
CT+ N RV+VR +Y PE S P Q++F Y+++ITN P+TVQL+ R W I E Q V+GPGVVGQQPVL PG ++Y+S CP+
Sbjct: 4 CTTRNIRVQVRPRYLPEASRPAAQQWMFAYEIEITNTGPETVQLLHRHWIITDGEGRT--QEVRGPGVVGQQPVLGPGAVYQYASGCPL 90
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Match: A0A2V8DIE0_9BACT (Protein ApaG n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8DIE0_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 1.200e-23 Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 1
Query: 28 SGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQLVSRTWEIKAVEASEAPQLVKGPGVVGQQPVLEPGQSFEYSSACPI 288
+ N RVEV SQY PE+S P + Q+ F Y V+ITN+ QTVQL+SR W I +A+ + V+G GVVG+QPVL PG+SFEY+S CP+
Sbjct: 17 TNNVRVEVESQYAPERSLPFQSQWFFHYTVRITNERDQTVQLLSRHWII--TDATGHTEEVRGAGVVGEQPVLSPGESFEYTSGCPL 101 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4387.11119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4387.11119.1 >prot_H-paniculata_contig4387.11119.1 ID=prot_H-paniculata_contig4387.11119.1|Name=mRNA_H-paniculata_contig4387.11119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp HETTGVCCTSGNFRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSPQTVQback to top mRNA from alignment at H-paniculata_contig4387:5027..5648+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4387.11119.1 ID=mRNA_H-paniculata_contig4387.11119.1|Name=mRNA_H-paniculata_contig4387.11119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=622bp|location=Sequence derived from alignment at H-paniculata_contig4387:5027..5648+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4387:5027..5648+ >mRNA_H-paniculata_contig4387.11119.1 ID=mRNA_H-paniculata_contig4387.11119.1|Name=mRNA_H-paniculata_contig4387.11119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=582bp|location=Sequence derived from alignment at H-paniculata_contig4387:5027..5648+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |