prot_H-paniculata_contig43839.11113.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43839.11113.1
Unique Nameprot_H-paniculata_contig43839.11113.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
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BLAST of mRNA_H-paniculata_contig43839.11113.1 vs. uniprot
Match: D8LQ49_ECTSI (HPP family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ49_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.720e-11
Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:   12 RRKAPIAPAVRYLLEVVCTDLVACGESFVPDERGGQTLVPYGSFVAIEVR 61
            RRKAPI PAVRYL+E +C DLVACGE FVP  R   TLV +  F+  EVR
Sbjct:  137 RRKAPITPAVRYLMEAMCVDLVACGECFVPHFRARHTLVRFCGFIPPEVR 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43839.11113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ49_ECTSI1.720e-1164.00HPP family protein n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43839contigH-paniculata_contig43839:899..1081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43839.11113.1mRNA_H-paniculata_contig43839.11113.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43839 899..1081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43839.11113.1 ID=prot_H-paniculata_contig43839.11113.1|Name=mRNA_H-paniculata_contig43839.11113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
LAAVERPFGFSRRKAPIAPAVRYLLEVVCTDLVACGESFVPDERGGQTLV
PYGSFVAIEVR
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