prot_H-paniculata_contig438.11111.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig438.11111.1
Unique Nameprot_H-paniculata_contig438.11111.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length178
Homology
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: D7G590_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G590_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 2.720e-79
Identity = 132/184 (71.74%), Postives = 147/184 (79.89%), Query Frame = 0
Query:    1 MVRVVAMFACLLTLVAHARAFMLAPRGSVVGAAARITAE------SSFTGLT-VCQREATSGHGTLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            M R  A+ ACL+ L+A A +FM+ P G   GAAA I A+      S FTG   VCQR+AT+    LRMMRHRKGFKKLNLPADQRKALLRGLTTQ+IRHGRI TT  RAKA+RK V+HMITLSK G LHARRQA+GY+YDKQLVHALFESG +RYGERPGGYTRI +T PRKGDNAKMAIIELV
Sbjct:    1 MARTFALVACLVALIAQASSFMIGPGG---GAAATIRAQRQGAAVSGFTGCNPVCQRDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKHVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: A0A7S2HZN5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HZN5_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.010e-59
Identity = 105/175 (60.00%), Postives = 131/175 (74.86%), Query Frame = 0
Query:    3 RVVAMFACLLTLVAHARAFMLAPRGSVVGAAARITAESSFTGLTVCQREATSGHGTLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            RV+A+FA   TL+A A AF +    + +G +   T ES++       R  ++G   L MMRHRK  KKLN PADQRKALLR LTT++IRHGRI TT  RAKA+RK V+HMI L KRGDLHARRQALG++YDK LVH+LFE+ P+RY +R GGYTR+ +T+PR+GDNAKMA+IELV
Sbjct:    2 RVLALFA---TLIAGAAAFGVGSSSTFIGTSVA-TLESTYAA-----RGVSNGRADLSMMRHRKKLKKLNKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIELGKRGDLHARRQALGWVYDKDLVHSLFEAAPERYSDRNGGYTRVLRTMPRQGDNAKMAVIELV 167          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: A0A1E7FKR3_9STRA (50S ribosomal protein L17 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKR3_9STRA)

HSP 1 Score: 190 bits (483), Expect = 4.350e-59
Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 0
Query:   29 VVGAAARITAESSFTGLTVCQREATSGHGTLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            +VGA A   +  SF G +V   EA     +L M+ HRKGF KL  PADQRKALLR LTT+ IRHGRI TT  RA+A+RK V+HMITL KRGDLHARRQAL +MYDKQLVH+LF++ PDRYG+R GGY R+ +T+ R+GDNAKMAIIELV
Sbjct:   10 LVGATAFAPSSGSFAGRSVSLTEAQKSTSSLNMISHRKGFNKLGKPADQRKALLRALTTETIRHGRIKTTLVRARAVRKHVDHMITLGKRGDLHARRQALAWMYDKQLVHSLFDAAPDRYGDRNGGYCRVLRTVARQGDNAKMAIIELV 158          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: A0A7S1DX23_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DX23_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.250e-58
Identity = 99/155 (63.87%), Postives = 122/155 (78.71%), Query Frame = 0
Query:   29 VVGAAARITAESSFTGL---TVCQREATSGHGT---LRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            + GA+A +   S+FTG    T+ Q   T+   T   L MMRHRKGFKKL  PADQRKALLR LTT++IRHGRI TT  RA+A+RK V+HMITL KRGDLHARRQA+ ++YDK LVHALF++ P+RYG+R GGYTR+ +T+PR+GDNAKMA+IELV
Sbjct:   26 IAGASAYVVGGSAFTGYGMATLQQAPPTTISRTKSNLDMMRHRKGFKKLGKPADQRKALLRALTTEIIRHGRIKTTLVRARAVRKHVDHMITLGKRGDLHARRQAMSWVYDKNLVHALFDAAPERYGDRNGGYTRVLRTVPRQGDNAKMAVIELV 180          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: A0A448ZH01_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZH01_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.820e-58
Identity = 101/150 (67.33%), Postives = 117/150 (78.00%), Query Frame = 0
Query:   29 VVGAAARITAESSFTGLTVCQREATSGHGT-LRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            +VGA+A   A  SFTG  VC  E  S   T L M+ HRKGFKKL  PADQRKALLR LTT+ IRHGRI TT  RA+A+RK V+HMI L KRGDLHARRQA+G+MYDKQLVH+LFE+ PDRY +R GGY R+ +T+ R+GDNAKMAIIELV
Sbjct:   11 LVGASAFAPA-GSFTGSPVCLSERASAPSTQLSMISHRKGFKKLGKPADQRKALLRALTTETIRHGRIKTTLVRARAVRKHVDHMIELGKRGDLHARRQAMGWMYDKQLVHSLFEAAPDRYADRNGGYCRVLRTVARQGDNAKMAIIELV 159          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: A0A6V2NXL1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NXL1_9STRA)

HSP 1 Score: 188 bits (477), Expect = 4.590e-58
Identity = 103/169 (60.95%), Postives = 123/169 (72.78%), Query Frame = 0
Query:    9 ACLLTLVAHARAFMLAPRGSVVGAAARITAESSFTGLTVCQREATSGHGTLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            A L T VA A AF +    S  G +  IT E ++       R A +G   L MMRHR   KKLN PADQRKALLR LTT++IRHGRI TT  RAKA+RK V+HMI L KRGDLHARRQALG++YDK LVH+LFE+ P+RY +R GGYTR+ +T+PR+GDNAKMA+IELV
Sbjct:    5 ALLATFVAAANAFGVGSLSSFTGTS--ITLEPTYV-----VRGAPAGRSDLSMMRHRNKLKKLNKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIELGKRGDLHARRQALGWVYDKDLVHSLFEAAPERYSDRNGGYTRVLRTMPRQGDNAKMAVIELV 166          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: A0A7S4HPH3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPH3_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.350e-57
Identity = 109/177 (61.58%), Postives = 129/177 (72.88%), Query Frame = 0
Query:    3 RVVAMFACLLTLVAHARAFMLAPRGSVVGAAARITAESSFTGLTVCQRE--ATSGHGTLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            RV+A+FA +   VA A AF        VGA A  +A+SSF G  V +    A    G + MMRHRK   KL  PADQRKALLR LTT++IRHGRI TT  RAKA+RK V+HMI L KRGDLHARRQALG+MYDK LVH+LFE+ P+RY +R GGYTR+ +T+PR+GDNAKMAIIELV
Sbjct:    2 RVLAIFAAM---VAGASAFG-------VGAPA-FSAKSSFAGAAVSESTCVARETRGDMSMMRHRKKVAKLGKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIQLGKRGDLHARRQALGWMYDKDLVHSLFEAAPERYSDREGGYTRVLRTMPRQGDNAKMAIIELV 167          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: A0A7S3P3S4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3S4_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.860e-57
Identity = 96/155 (61.94%), Postives = 119/155 (76.77%), Query Frame = 0
Query:   29 VVGAAARITAESSFTGLTVCQREATS------GHGTLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            V GA+A +   ++F G +V    +T+          L MMRHRKGFK L  PADQRKALLR LTT++IRHGRI TT  RAKA+RK V+H+I L KRGDLHARRQA+ ++YDKQLVHALFE+ PDRYG++ GGYTR+ +T+PR+GDNAKMA+IELV
Sbjct:   12 VGGASAFVNGGTAFLGRSVMTTASTTTDSRTAARSELSMMRHRKGFKTLGKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHIIELGKRGDLHARRQAMAWVYDKQLVHALFEAAPDRYGDQNGGYTRVLRTVPRQGDNAKMAVIELV 166          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: A0A1Z5J8C0_FISSO (Large subunit ribosomal protein L17 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8C0_FISSO)

HSP 1 Score: 184 bits (468), Expect = 1.290e-56
Identity = 94/147 (63.95%), Postives = 113/147 (76.87%), Query Frame = 0
Query:   34 ARITAESSFTGLTVCQREATS---GHGTLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            A +T  S+F G  +    + S   G   L MMRHRKGFK L  PADQRKALLR LTT++IRHGRI TT  RAKA+RK V+HMI L KRGDLHARRQA+ ++YDK LVH+LFE+ PDRYGE+ GGYTR+ +T+ R+GDNAKMAI+ELV
Sbjct:   26 ATVTGGSAFVGQALVTSPSASVHTGRSELNMMRHRKGFKTLGKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIELGKRGDLHARRQAMAWVYDKNLVHSLFEAAPDRYGEQNGGYTRVLRTVARQGDNAKMAILELV 172          
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Match: K0TAZ9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAZ9_THAOC)

HSP 1 Score: 186 bits (472), Expect = 2.210e-56
Identity = 97/144 (67.36%), Postives = 114/144 (79.17%), Query Frame = 0
Query:   40 SSFTGL---TVCQREATSGHG---TLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWARAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGERPGGYTRIYKTLPRKGDNAKMAIIELV 177
            SSFTG    TV +  A + H    +L MMRHRK   KL  PADQRKALLR LTT++IRHGRI TT  RAKA+RK V+HM+ L KRGDLHARRQALG++YDK LVHALFE+ P+RYGER GGYTR+ +T+PR+GDNAKMA+IELV
Sbjct:   91 SSFTGTHISTVMEPAARAHHSKSSSLEMMRHRKRVPKLGKPADQRKALLRALTTEIIRHGRIKTTAVRAKAVRKHVDHMVELGKRGDLHARRQALGWIYDKDLVHALFEAAPERYGERNGGYTRVLRTMPRQGDNAKMAVIELV 234          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig438.11111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G590_ECTSI2.720e-7971.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2HZN5_9STRA1.010e-5960.00Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7FKR3_9STRA4.350e-5965.1050S ribosomal protein L17 n=1 Tax=Fragilariopsis c... [more]
A0A7S1DX23_9STRA1.250e-5863.87Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
A0A448ZH01_9STRA1.820e-5867.33Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6V2NXL1_9STRA4.590e-5860.95Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4HPH3_9STRA1.350e-5761.58Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3P3S4_9STRA1.860e-5761.94Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5J8C0_FISSO1.290e-5663.95Large subunit ribosomal protein L17 n=2 Tax=Fistul... [more]
K0TAZ9_THAOC2.210e-5667.36Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000456Ribosomal protein L17PFAMPF01196Ribosomal_L17coord: 81..177
e-value: 2.0E-33
score: 115.1
IPR000456Ribosomal protein L17TIGRFAMTIGR00059TIGR00059coord: 68..177
e-value: 1.1E-39
score: 133.1
IPR000456Ribosomal protein L17PANTHERPTHR14413RIBOSOMAL PROTEIN L17coord: 48..177
IPR000456Ribosomal protein L17PROSITEPS01167RIBOSOMAL_L17coord: 95..117
IPR000456Ribosomal protein L17HAMAPMF_01368Ribosomal_L17coord: 66..177
score: 25.052
IPR036373Ribosomal protein L17 superfamilyGENE3D3.90.1030.10coord: 62..177
e-value: 1.1E-45
score: 156.6
IPR036373Ribosomal protein L17 superfamilySUPERFAMILY64263Prokaryotic ribosomal protein L17coord: 62..177
NoneNo IPR availablePANTHERPTHR14413:SF1850S RIBOSOMAL PROTEIN L17, CHLOROPLASTICcoord: 48..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.888

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig438contigH-paniculata_contig438:25690..31461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig438.11111.1mRNA_H-paniculata_contig438.11111.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig438 25516..32326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig438.11111.1 ID=prot_H-paniculata_contig438.11111.1|Name=mRNA_H-paniculata_contig438.11111.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MVRVVAMFACLLTLVAHARAFMLAPRGSVVGAAARITAESSFTGLTVCQR
EATSGHGTLRMMRHRKGFKKLNLPADQRKALLRGLTTQLIRHGRIYTTWA
RAKALRKPVEHMITLSKRGDLHARRQALGYMYDKQLVHALFESGPDRYGE
RPGGYTRIYKTLPRKGDNAKMAIIELV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000456Ribosomal_L17
IPR036373Ribosomal_L17_sf