mRNA_H-paniculata_contig4374.11103.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: D7FKP5_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP5_ECTSI) HSP 1 Score: 692 bits (1785), Expect = 4.880e-229 Identity = 367/597 (61.47%), Postives = 428/597 (71.69%), Query Frame = 2
Query: 2 VYHKYKN-KNPGGPPSRVRLASDKFETAEQWRNAIRDQLEKLQALQQQTQRELDLTTQGSSMWMGQRLGELGIPSWTTQPPPTMPPPALKAIDLRVVNEMLGNAAWMSREVIQGLAILEQDLSATAXXXXXXDAGEGRIGFGTPGGKGKEDRGAAGGWGLGGVGPVLKTQTIVRASPLETFVALMGAPRNSMNAVVSGIISVQCMDDHSDVVRLCARPVWLKMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYPGYVRGDVNAVYTISPRRDSLPGAAAHPECLLACHAQVDPKGWVWSGLGFRERYTSNFLMHVLEVRNVIEAERFIEARISFRPDSKFSSANASNALGSVAPRSTEDGGPLLFEVLGAPGSKAPEEECPYPSAVCQDGDGQYTLDQQDRVRVRGSTSLENDPPPTLDARMWAEVDGREFSVRGGSYLTNRLKVQSAKQMFRLRAVDMFVLPQPATHIASHPSNRVQIARQKGETAFVWVLQIMVPGPPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFRGNNYLETDLEIG 1789
Y+KYK+ K P G P RVR+AS K ET EQWR A+ DQLE L+A Q +++++ SMW LG LG+P W +P PPPALKAIDLRVV+ +L N+ W+SR V GL +L+Q + A A D+ E P WGLGG GPVLKTQTIVRASPLETFVALMG PR S VVSG +VQ +DDHSDVVR+C RP WLK+AWA+PRDFCLARYWH AEDGCYI+ LSSMEH CP P +VRG+ + VYTI+PRRDS+PG A PEC+L+CH QVDPKGWVW+ LGFRE YT++ LM LEVR+VIEAERF+ RIS RPD ++ N V PRS DG P LFEVLG G ++ +E G T + D R G+TSLE PPPTLDAR W E G F VRG SY TNR+KV SAKQMFRLRAVD+FVLP+PATH+A+H NRVQIAR+ GET+FVWVLQIMVPGPPHYAF+CYFTP ++ W+D STPFG LA++VFFG D FRD+RLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHF+G+NYLETDLEIG
Sbjct: 320 AYNKYKSSKKPNGSPGRVRVASFKAETVEQWRQAVLDQLENLRA---QPRQDVE-----RSMWTKSGLG-LGLPGWCVRP--EGPPPALKAIDLRVVDSLLSNSVWVSRGVTHGLPVLQQQVGAVAGLESGSDSEECAQAVAQPS------------WGLGGSGPVLKTQTIVRASPLETFVALMGPPRMSHTTVVSGTYTVQSLDDHSDVVRICLRPAWLKVAWASPRDFCLARYWHMAEDGCYIMALSSMEHHDCPPDPEFVRGEAHLVYTIAPRRDSVPGGHASPECMLSCHVQVDPKGWVWNRLGFRELYTTHILMTALEVRDVIEAERFMTPRISLRPDP--AAGGFDNGQIGVGPRSP-DGSPFLFEVLGPTGPESRQET----------GGAPATENVLDCSRRGGATSLETCPPPTLDARRWTEAVGSNFMVRGASYPTNRVKVASAKQMFRLRAVDLFVLPEPATHLAAHHGNRVQIARKAGETSFVWVLQIMVPGPPHYAFVCYFTPA--ADTWMDQSTPFGKLAKQVFFGDSDAFRDERLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFKGDNYLETDLEIG 878
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: A0A6H5JSN2_9PHAE (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN2_9PHAE) HSP 1 Score: 395 bits (1014), Expect = 2.110e-117 Identity = 217/385 (56.36%), Postives = 256/385 (66.49%), Query Frame = 2
Query: 2 VYHKYKN-KNPGGPPSRVRLASDKFETAEQWRNAIRDQLEKLQALQQQTQRELDLTTQGSSMWMGQRLGELGIPSWTTQPPPTMPPPALKAIDLRVVNEMLGNAAWMSREVIQGLAILEQDLSATAXXXXXXDAGEGRIGFGTPGGKGKEDRGAAGGWGLGGVGPVLKTQTIVRASPLETFVALMGAPRNSMNAVVSGIISVQCMDDHSDVVRLCARPVWLKMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYPGYVRGDVNAVYTISPRRDSLPGAAAHPECLLACHAQVDPKGWVWSGLGFRERYTSNFLMHVLEVRNVIEAERFIEARISFRPDSKFSSANASNALGSVAPRSTEDGGPLLFEVLGAPGSKAPEE 1153
Y+KYK+ K P G P RVR+AS K ET EQWR A+ DQLE L+A +Q SMW LG LG+P W +P PPPALKAIDLRVV+ +L N+ W+SR V GL +L+Q + A A D E P WGLGG GPVLKTQTIVRASPLETFVALM PR S VVSG +VQ +DDHSDVVR+C RP WLK+AWA+PRDFCLARYWH AEDGCYI+ LSSMEH CP+ P +VRG+ + V+TI+PRRDS+PG A PEC+L+CH QVDPKGWVW+ LGFRE YT++ LM LEVR VIEAERF+ RIS RPD ++ N V PRS DG P LFEVLG G ++ +E
Sbjct: 420 AYNKYKSSKKPDGSPGRVRVASFKAETVEQWRQAVLDQLENLRAQPRQDAER--------SMWAKSGLG-LGLPGWFVRP--EGPPPALKAIDLRVVDSLLSNSVWVSRGVTHGLPVLQQHVGAVAGLESGSDNEECAQAVAQPS------------WGLGGSGPVLKTQTIVRASPLETFVALMAPPRMSHTTVVSGTYTVQSLDDHSDVVRICLRPAWLKVAWASPRDFCLARYWHMAEDGCYIMVLSSMEHHDCPIDPEFVRGEAHLVFTIAPRRDSVPGGHASPECMLSCHVQVDPKGWVWNRLGFRELYTTHVLMTALEVRGVIEAERFMTPRISLRPDP--AAGGFDNGQIRVGPRSA-DGSPFLFEVLGPTGPESSQE 778
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: A0A6H5JQ77_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ77_9PHAE) HSP 1 Score: 357 bits (916), Expect = 7.100e-111 Identity = 174/221 (78.73%), Postives = 198/221 (89.59%), Query Frame = 2
Query: 1316 VRGGSYLTNRLKVQSAKQMFRLRAVDMFVLPQPATHIASHPSNRVQIARQKGETAFVWVLQIMVPGPPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPK--IVEGNWVVKRAAGSTPAILGTKLKQHHFRGNNYLETDLEIGSSSVAASITRLCTGYAKSLVVDMVWTIQGNIAEELPEIVLAGVRIHHLDMLSAKPFDPSAA 1972
VRG SYLTNR+KV SAKQMFRLRAVD+FVLP+PATH+A+H NRVQIAR+ GET+FVWVLQIMVPGPPHYAF+CYFTP +++W+D STPFG LA++VFFG D FRD+RLKLIPK IV+GNWVVKRAAGSTPAILGTKLKQHHF+G+NYLETDLEI SSS+AA+ITRLCTGYAKSLVVDMVWTIQGN EELPE+ L GVRI+ LD+L+AKP D SAA
Sbjct: 2 VRGASYLTNRVKVASAKQMFRLRAVDLFVLPEPATHLAAHHGNRVQIARKAGETSFVWVLQIMVPGPPHYAFVCYFTPA--ADNWMDQSTPFGKLAKQVFFGDSDAFRDERLKLIPKASIVQGNWVVKRAAGSTPAILGTKLKQHHFKGDNYLETDLEIASSSLAANITRLCTGYAKSLVVDMVWTIQGNTEEELPEVALGGVRINALDLLAAKPLDLSAA 220
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: W7TJE2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJE2_9STRA) HSP 1 Score: 379 bits (973), Expect = 2.550e-110 Identity = 249/648 (38.43%), Postives = 339/648 (52.31%), Query Frame = 2
Query: 56 LASDKFETAEQWRNAIRDQLEKLQALQQQTQRELDLTTQGSSMWMGQRLGELGIPSWTTQPPPTMPPPALKAIDLRVVNEMLGNAA-WMSREVIQGLAILEQDLSATAXXXXXXDAGEGRIGFGTPGGKGKEDRGAAGGWGLGGVG-----PVLKTQTIVRASPLETFVALMGAPRNSMNAVVSGIISVQCMDDHSDVVRLCARPVWLKMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYPGYVRGDVNAVYTISPRRDSLPGAAAH-----PECLLACHAQVDPKGWVWSGLGFRERYTSNFLMHVLEVRNVIEAERFIEARISFRPDSKFSSANASNALGSVAPRSTEDGGPLLFEVLGAPGSKAPEEECPYPSAVCQDGDGQYTLDQQDRVRVRGSTSLENDPPPTLDARMWAEVDGREFSVRGGSYLTNRLKVQSAKQMFRLRAVDMFVLPQPATHIASHPSNRVQIARQKGET-AFVWVLQIMVPG-PPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFRGNNYLETDLEIGSSSVAASITRLCTGYAKSLVVDMVWTIQGNIAEELPEIVLAGVRIHHLDMLSAKPFD 1960
LAS+ E+A++WR+A+ Q+ Q+ L+ G + R+G+ G + + P L + E G AA W V GL + E D T AG R G E +G G GG P K Q V A+PL+TF+AL+ P +N V+ + +V+ +DD +DV+ L +P + W APRDFCL R W EDG Y++C S HP CP G+VRG +++VYTISP+R S G + PE LL QVDP+GW+W LG+ + + L L+VR+++EAERF+ + + E+GG V G + PE A G RGS +L P T+ A MW ++D F VRG +Y RLK+ SA FRL AVD+F LP+ +IA HP+NRVQ A G+ +FV+V+Q+ +PG ++ YF P + S L+ TP L + FFG+DD +RD R KLIPKIVEGNWVV+++ GSTPAILGTKLKQ + +G NY E D+ I SSSVAA + RL GYAK+LVVD+ IQG +ELPE VLAG RI+H+D+ SAK +
Sbjct: 337 LASESKESAKEWRSALEAQIRWSQSFPGADW----LSMVGLDRRLPARIGKGGSFKHSRRQDGQRPSNKLDDV------ERWGRAACWRPWGVYNGLRVYEIDHVTTRSGVVKRPAGL-RDGL--------EGQGNGGSTLFGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCRVLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSVYTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGWIWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNVD----------------------TDEEGGTTGTAVRG----ETPELGAEAGGATSSSGG-------------RGSGTLVTHRP-TVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAMAAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSV--LEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRLE 923
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: A0A7S3M0W9_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0W9_9STRA) HSP 1 Score: 349 bits (895), Expect = 2.560e-101 Identity = 179/494 (36.23%), Postives = 279/494 (56.48%), Query Frame = 2
Query: 491 PVLKTQTIVRASPLETFVALMGAPRNSMNAVVSGIISVQCMDDHSDVVRLCARPVWLKMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYPGYVRGDVNAVYTISPRRDSLPGA-AAH----------PECLLACHAQVDPKGWVWSGLGFRERYTSNFLMHVLEVRNVIEAERFIEARISFRPDSKFSSANASNALGSVAPRSTEDGGPLLFEVLGAPGSKAPEEECPYPSAVCQDGDGQYTLDQQDRVRVRGSTSLENDPPPTLDARMWAEVDGREFSVRGGSYLTNRLKVQSAKQMFRLRAVDMFVLPQPATHIASHPSNRVQIARQKGETAFVWVLQIMVPGPPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFRGNNYLETDLEIGSSSVAASITRLCTGYAKSLVVDMVWTIQGNIAEELPEIVLAGVRIHHLDM 1939
P ++ + AS +TF A++ + ++ + V+ +D+ +DV+ L P++L +W APRDFCL RYW DG Y++CL S HP CP+ GYVRG+++A Y ++P R + GA H ECLL+ AQ++P GW+W G G+++ + F++HVL+VR+ +++ERF + + D K + NAS SVA ++ D+ V S+ +PPP L+ + W + D F VRG Y+T K SA +F+ +D+F P+ ++A+HP NRV +AR++GE +V+VL IMVPG P+ F+CYF + ++ TPFG +A F G DD+FR+ R KLIPK+V+GN ++K A TP ++G KLKQ++ +G+NY E D+++GSSSVA ++ L GY+K++VVDM + +QGN EELPE+++ +H+DM
Sbjct: 285 PCMRVNIGINASTADTFSAIINFSNSLQTGIIKSMRIVENIDNFTDVIHLKLEPMFLYPSWTAPRDFCLIRYWRDNFDGSYVICLDSTLHPECPLVEGYVRGELHAAYIVAPPRVKVAGAYGGHVAKDVEDEDGAECLLSFIAQLNPSGWIWEGFGYQQAFLKEFMLHVLDVRDAMDSERFQQVQFDPMNDPKKITHNASAV--SVA------------------------------------------VEADDKKLV----SIATEPPPGLNPQYWMDSDASTFRVRGKDYMTTNKKTNSAPALFKFIGIDLFETPEAHRNMAAHPKNRVHLARERGENDWVFVLNIMVPGTPYLNFVCYFLADRAL---VEEDTPFGRIARPFFNGNDDEFRNGRFKLIPKVVDGNLMIKMAVKDTPTLIGNKLKQYYSKGDNYFEIDVDVGSSSVARNVCGLAIGYSKAIVVDMGFCLQGNTEEELPEVLMGCCSCYHVDM 727
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: A0A835Z631_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z631_9STRA) HSP 1 Score: 337 bits (864), Expect = 9.410e-93 Identity = 217/632 (34.34%), Postives = 302/632 (47.78%), Query Frame = 2
Query: 491 PVLKTQTIVRASPLETFVALMGA---------------------------------PRNSMNAVVS-GIISVQCMDDHSDVVRLCARPVWL-KMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYP-GYVRGDVNAVYTISPRRD-SLP-GAAAHPECLLACHAQVDPKGWVWSGLGFRERYTSNFLMHVLEVRNVIEAERFIEARISFRPDSKFSSANASNALGSVAPRSTEDGGPLLFEVLGAPGSKAPEEECPYPSAVCQDGDGQYTLDQQDR----VRVRGSTSLENDPPPTLDARMWAEVDGREFSVRGGSYLTNRLKVQSAKQMFRLRAVDMFV--------------------LPQPATHIASHPSNRVQIA------------------------------------RQKGETAFVWVLQIMVPGPPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFRGNN--------------YLETDLEIGSSSVAASITRLCTGYAKSLVVDMVWTIQGNIAEELPEIVLAGVRIHHLDMLSAKPF--------DPSAAL*PAFYTCPLGLLAAVRS 2026
P+L+ Q +VRASPLET AL A P ++ VV+ GI ++ +DD++DV+ A V L +AWA PR FC+AR+W DGCY+VC+ S H LCP P G+VRG +NA++TI+PRR+ S+P + PEC+L +VDP GWVW G+++ Y + L+ +++R++IE E F R+ + A + +R R + + D P MW+++D FS+RG +YL +R+K SA +MF LRA+D++ + +P +I S+ NR+Q A R G+T FVW +QIMVPGPPH A + YFTP + + S TPFG L +RV D D RLKL+P+I EGNWVV+RA TPAILG KL+Q HFRG+ YLET ++IGSSS+AASITRL GYAK+LVV++ WT+QG +ELPE++L G R+ HLDM +A+P+ P A PA T P G A +
Sbjct: 663 PMLRCQVLVRASPLETLTALSAAALVXXXXXXXXXXXXXLAGQELSDGGEARHPTLPASAEAGVVALGIRVLETLDDNTDVIEYLAASVRLGPLAWAGPRQFCMARHWREDSDGCYVVCMDSTPHRLCPPPPPGFVRGTMNALFTIAPRREASMPLTGISTPECMLTHFLRVDPGGWVWRWGGYQQHYGAQLLLQAIDIRDIIEEETFHSPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTAAAAAPAAHAGAHAETAXXXXXXXXXXLRPRSAAAGILDAEPCCPPHMWSDIDASAFSLRGATYLADRVKAASAPRMFDLRAIDLWQFHPHAXXXXXVRNAAAAAGWVKEPTFNITSNMYNRIQRALMLTSTSMLKLHAVAPSXXXXXXXXXXXXXXXXXXXRAAGDTTFVWAVQIMVPGPPHIACVAYFTPRDEAA-LSASDTPFGRLTQRVLLSGDAAALDARLKLVPRITEGNWVVRRACPPTPAILGAKLRQAHFRGDRCGTXXXXXXXXXXRYLETSVDIGSSSIAASITRLSIGYAKTLVVELAWTLQGEAEDELPEVILGGFRMVHLDMATAQPYVGEPPETPAPGADAAPAAVTAPPGAXXAAAT 1293
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: A0A7R9U5I6_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5I6_9STRA) HSP 1 Score: 311 bits (797), Expect = 1.040e-86 Identity = 185/529 (34.97%), Postives = 276/529 (52.17%), Query Frame = 2
Query: 500 KTQTIVRASPLETFVALMGAPRNSMNAVVSGIISVQCMDDHSDVVRLCARPVWLKMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYPG--YVRGDVNAVYTISP----RRDSLPGAAAHPECLLACHAQVDPKGWVWSGLGFRERYTSNFLMHVLEVRNVIEAERFIEARISFRPDSKFSSANASNALGSVAPRSTEDGGPLLFEVLGAPGSKAPEEECPYPSAVCQDGDGQYTLDQQDRVRVRGSTSLENDPPPTLDARMWAEVDGREFSVRGGSYLTNRLKVQSAKQMFRLRAVDMFV----LPQPATHIASHPSNRVQIARQK----------------------------------GETAFVW--VLQIMVPGPPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFRGNNYLETDLEIGSSSVAASITRLCTGYAKSLVVDMVWTIQGNIAEELPEIVLAGVRIHHLDMLSA 1948
K V+A+PL+ FVAL+ P + V + V+ +DDH+DV+ + RP+ L W RDFCL RYW +DG YI+ SMEH CP YVRG+++A+YTI+P + + PG+ E + QVDPKGW+WS GF + L+H++++R+ +E RF + +S + +A + + + ++ A G ++P+ D R + LE++P P + W+E D F VRG +YLT+R+K+ + + FRL +VD+ +PQ +I++HP NRV +A +K F W VL IM+PGPPH +F YFTP +P +W +T F + A FFG DD+ D+ KLIPKIV+GN+VV+R GSTPA+LGTKLKQ++ R +Y E D++IGSSSVAA + RL GYA ++ VDM ++G ELPE+++ V+ +D+ A
Sbjct: 350 KAAVSVKATPLQAFVALLSMPPDLRRGCVESVRIVETIDDHADVIHMKLRPIDLGPTWTTARDFCLMRYWRLDDDGYYIIVFDSMEHRECPQSEDDDYVRGELHALYTIAPLNPDKTFATPGSPEPSESFVTHVVQVDPKGWMWSTGGFTATFAEVLLLHLIDLRDHLEENRFAAIDVDPLAESVEETKHAHSLSRDL----------VQTDIDNAAGKRSPKS---------------------DAQRRQTDIGLESNPVP-FNLDQWSEPDSNTFMVRGPNYLTDRVKISAGQAQFRLLSVDVLEWSSRVPQ---NISAHPKNRVAMAYRKLTGNDFVPTFTSEPNEPDAEPRQIPADQLPKPESCPEGFPWLFVLHIMIPGPPHLSFAAYFTPVDP--EWHQKNTSFAHAAMPFFFGGDDELCDKTFKLIPKIVQGNFVVRRVVGSTPAVLGTKLKQYYHRAPHYFELDVDIGSSSVAAGVVRLSLGYATTITVDMGLVLEGKKERELPEVIMGCVQCASMDLSQA 841
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: A0A7S2NZD6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZD6_9STRA) HSP 1 Score: 313 bits (801), Expect = 2.000e-84 Identity = 196/526 (37.26%), Postives = 283/526 (53.80%), Query Frame = 2
Query: 491 PVLKTQTIVRASPLETFVALMGA-------PRNSMNAVVSGIISVQCMDDHSDVVRLCARPVWLKMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYPGYVRGDVNAVYTISPR--RDSLPGAAAH--PECLLACHAQVDPKGWV-------WSGLGFRERYTSNFLMHVLEVRNVIEAERF-IEARISFRPDSKFSSANASNAL-----GSVAPRSTEDGGPLLFEVLGAPGSK------APEEECPYPSAVCQDGDGQYTLDQQDRVRVR-------GSTSLENDPPPTLDARMWAEVDGREFSVRGGSYLTNRLKVQSAKQMFRLRAVDMFVLPQPA-THIASHPSNRVQIARQ------KGETA-FVWVLQIMVPGPPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFRGNNYLETDLEIGSSSVAASITRLCTGYAKSLVVDMVWTIQGNIAEELPEIVLAGVRIHHL 1933
P LK+Q I+ A PL+ FV LM P + +S + MD+H DV+ L RP++L +W APRDFCL RYW +DG YIVC S++H CP YVRG+++ VY ISPR R S+ G PECL+ QVDP+GWV + G+ + ++ + L+ +L++R+ + RF + R+S ++ ++ N + L G VA T+D ++ + G + A E E + G G + ++ G PP L+ MWAE D F VRG Y ++ K + MFRL AVD+ + + SHP R+Q A + KGE FV+ L I +PGPPHY + Y+ ++ ++ TPF LA + FFG DD FRD+ KLIP+I+EGN++V++A GSTPAI+GTKLKQ + R + Y E L+IGSSSVAA + RL +GYAK+L+VDM + ++GN LPE V+ R+ H+
Sbjct: 784 PPLKSQVILNAKPLDAFVYLMTRGRVQNIDPNHGTGENLSAFRVIDKMDEHMDVIHLIFRPLYLFPSWTAPRDFCLQRYWRYEDDGSYIVCYDSVKHRECPPMKDYVRGELHGVYMISPRKSRHSIHGEEDKQPPECLMTQIVQVDPRGWVPTMKLPALAHQGYADAFSVSALLQMLDIRDALNYSRFMVSDRVSVYRATQ-TARNLTKTLTAEQTGGVA---TQDPATVVTDDEGEDNNGSYDYRFANEREQKLDDSAGGKGKGGDVAPNEAKMEASVGKGGAIGVGEKIRMVPPPLNQNMWAEPDSNSFRVRGKKYKVDKKKENAGDAMFRLLAVDLVETSSNIMSGMCSHPKERIQRALERESKGIKGEMPPFVFALNIAIPGPPHYHCVIYYAVDDMDLINGNAGTPFSTLASKFFFGDDDTFRDKTFKLIPQIIEGNFIVRKAVGSTPAIMGTKLKQLYSRTDRYFEIILDIGSSSVAAGVIRLASGYAKTLIVDMAFVLEGNDESVLPEKVMGSCRLKHI 1305
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: A0A7S2ESX4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ESX4_9STRA) HSP 1 Score: 311 bits (798), Expect = 2.970e-84 Identity = 193/542 (35.61%), Postives = 281/542 (51.85%), Query Frame = 2
Query: 491 PVLKTQTIVRASPLETFVALM--GAPRNS--------------MNAVVSGIISVQCMDDHSDVVRLCARPVWLKMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYPGYVRGDVNAVYTISPRRDSLPGAAAHPECLLACHAQVDPKGWV-------WSGLGFRERYTSNFLMHVLEVRNVIEAERFIEARISFRPDSKFSSANASNALGSVAPRSTEDGGPLLFEVLGAPGSKAPEEECPYPSAVCQDGDGQYTLDQQDRVR-------------------------VRGSTSLENDPPPTLDARMWAEVDGREFSVRGGSYLTNRLKVQSAKQMFRLRAVDMFVLPQPATH-IASHPSNRVQIARQKGETA-----------FVWVLQIMVPGPPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFRGNNYLETDLEIGSSSVAASITRLCTGYAKSLVVDMVWTIQGNIAEELPEIVLAGVRIHHLD 1936
P LK ++ A+PL F+ LM G +N+ + V+ V+ +DDH D+++L RP++L +W APRDF L RYW DG Y VC S+EH CP PGYVRGD+++V+TI+PR+ S H ECLL Q+DP+GWV S G+ E + + L+ +++VR+ ++ +RF+ + P +SS+ + + A ++ EEE SA G+ +T Q+R RG ++ NDPP L A W+E D F VRG +Y T++ KV + +FRL A D+ + I HP RVQ A Q+ + FV + I++PGPP+Y F Y+ E+ S + TP L FFG D+FRD+ KLIP+IVEGN+VV++A GSTPAI+GTKLKQ + R + + E L+IGSSSVAA + RLC+GYAK +VVD+ + ++GN LPE V VR+ +++
Sbjct: 713 PPLKAHVVLNANPLNAFMCLMCNGRIQNTDLNSEDCETLSLCPNSGQVASFRIVKTLDDHMDIIQLVMRPLYLFPSWTAPRDFVLVRYWRLEADGTYFVCYDSIEHRDCPPTPGYVRGDLHSVFTIAPRKRSR----RHSECLLTHVVQMDPRGWVPTLSVPILSNYGYVEAFQVSALLQMIDVRDALDHDRFVPVALGAMPHKHWSSSKKLYTENDGETNYSSGENERYDNISRASSAEIEEEE--DESA----GNYDFTYASQERTSHDLLETKCQYSGGISVLSVVPSPESERGLNTISNDPPALL-ADWWSEPDANSFRVRGKTYKTDKKKVNAGSTLFRLIATDIIQVDASIFDGICHHPQERVQKAMQREKVLKSKGLPSDMPPFVVCINIVLPGPPYYHFATYYAVEDMSLINGANGTPSSKLCNEFFFGDSDEFRDKTFKLIPQIVEGNFVVRKAVGSTPAIMGTKLKQTYVRTDRFFEVVLDIGSSSVAAGVIRLCSGYAKQIVVDLAFLLEGNDESMLPERVFGTVRLKNIE 1243
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Match: A0A6U1RX28_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1RX28_CYCTE) HSP 1 Score: 286 bits (733), Expect = 1.440e-80 Identity = 170/511 (33.27%), Postives = 280/511 (54.79%), Query Frame = 2
Query: 491 PVLKTQTIVRASPLETFVALMG--------APRNSMNAVVSGIISVQCMDDHSDVVRLCARPVWLKMAWAAPRDFCLARYWHRAEDGCYIVCLSSMEHPLCPVYPGYVRGDVNAVYTISPRRDSLP----GAAAHPECLLACHAQVDPKGWV-------WSGLGFRERYTSNFLMHVLEVRNVIEAERFIE-ARISFRPDSKFSSANASNALGSVAPRSTEDGGPLLFEVLGAPGSKAPEEECPYPSAVCQDGDGQYTLDQQDRVRVRGST-SLENDPPPTLDARMWAEVDGREFSVRGGSYLTNRLKVQSAKQMFRLRAVDMFVLPQPA-THIASHPSNRVQIARQKGETA-----------FVWVLQIMVPGPPHYAFMCYFTPENPSNDWLDSSTPFGNLAERVFFGKDDDFRDQRLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFRGNNYLETDLEIGSSSVAASITRLCTGYAKSLVVDMVWTIQGNIAEELPEIVLAGVRI 1924
P LK ++ ASPL +F+ L+ P + + ++ ++DH DV+ L RP++L +W RDF L RYW DG Y++C+ S++H CP P + RG ++ V+TI+P++ S A HPEC+L QVDPKGW+ + G+ E + L+ +L++R+ ++ +RF+ ++ + RP K N S L ++ P S + + + + + E+ P + +T ++ VRV+ + S+ ++P P L + WAE F VRG SY ++LK+ + + RL AVD+ ++ +P + + HP+ R+Q+A ++ +A FV+++ I +PGPP Y + Y+ ++ S TP L ++ FFG D+FRD+ KLIP+IVEGN++V++A GSTPAI+GTKL+Q + + + + E L+ GSS VA + RL GYAK+LVVDM + +G+ E LPE + VR+
Sbjct: 72 PALKAHMVLNASPLNSFLCLLSLAKLQDGNGPLVPNSGQRASFRVIERLNDHMDVIHLFFRPLFLWPSWTTARDFVLLRYWRHDPDGTYVLCIDSVKHEDCPSLPDFTRGQMHGVFTIAPKKKSKGLGKVELALHPECMLTAVVQVDPKGWIPLAPLPPLTSQGYGEAFGVVALLQMLDIRDALDYDRFVPVSQDASRPMPK----NLSKELSALKPAS------VSLQRSHSADTTSDNEDDPV--------NYDFTYSDRESVRVKSNRKSIASNPVP-LPSEKWAEPMANSFRVRGKSYKKDKLKINAGSSIGRLIAVDVVLVDEPLFSGFSVHPTERMQLALERERSAKAKGLPTDLPPFVFIVNICLPGPPFYHGVFYYAVDDMSAIDGSDGTPSSRLCQKFFFGDSDEFRDRTFKLIPQIVEGNFLVRKAVGSTPAIMGTKLRQMYVKNDRFFEVILDCGSSQVATGVIRLSLGYAKTLVVDMGFLFEGDSDEVLPERLFGCVRM 563 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4374.11103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4374.11103.1 >prot_H-paniculata_contig4374.11103.1 ID=prot_H-paniculata_contig4374.11103.1|Name=mRNA_H-paniculata_contig4374.11103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=599bp MWMGQRLGELGIPSWTTQPPPTMPPPALKAIDLRVVNEMLGNAAWMSREVback to top mRNA from alignment at H-paniculata_contig4374:771..15660+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4374.11103.1 ID=mRNA_H-paniculata_contig4374.11103.1|Name=mRNA_H-paniculata_contig4374.11103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14890bp|location=Sequence derived from alignment at H-paniculata_contig4374:771..15660+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4374:771..15660+ >mRNA_H-paniculata_contig4374.11103.1 ID=mRNA_H-paniculata_contig4374.11103.1|Name=mRNA_H-paniculata_contig4374.11103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3594bp|location=Sequence derived from alignment at H-paniculata_contig4374:771..15660+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |