prot_H-paniculata_contig4367.11095.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4367.11095.1
Unique Nameprot_H-paniculata_contig4367.11095.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length121
Homology
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: A0A6H5JEV8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV8_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 5.110e-21
Identity = 48/117 (41.03%), Postives = 73/117 (62.39%), Query Frame = 0
Query:    4 FPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYS-GQDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEA 119
            FP+RE+V +L+W+ T TR DIA+AV    ++C +P + H  A + IL Y  R  +  I++  G   G  +  YAD+D+A+    RRSV++G V  GGGA+ W +RT++   + TTEA
Sbjct:  437 FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVTEGIVTCGGGAVPWFSRTKKCVTLSTTEA 553          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: A0A0J7K651_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K651_LASNI)

HSP 1 Score: 96.7 bits (239), Expect = 7.390e-21
Identity = 45/117 (38.46%), Postives = 75/117 (64.10%), Query Frame = 0
Query:    5 PYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSGQ-DFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            PYR++V +L+++   TR D+++ VS   KF E P  AH  A  ++L+Y+ R +N+ IT+ G  D   ++ A++DSDYA+C D+R+S+S   ++   G + W +R Q + A  TT+AE
Sbjct: 1082 PYRQIVGSLMYLAVATRPDLSYVVSVLSKFLERPSNAHWNAAKRVLKYLKRTLNVGITFDGNCDQSNQLVAFSDSDYASCPDTRKSISSVVLMFNNGPVIWSSRKQSIVATSTTDAE 1198          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: A0A2I0WQL2_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WQL2_9ASPA)

HSP 1 Score: 90.1 bits (222), Expect = 1.330e-20
Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 0
Query:    5 PYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSGQDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            PY   V +L++    TR DIA+ V    ++  NPG+ H +AV ++++Y+ R  +  +TY   D  +E+  Y+DSD+A CLDSRRS S    +L GGAISW +  Q + A  T EAE
Sbjct:    5 PYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKAVKRVMRYLKRTRDFMLTYQRSDH-LEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAISWKSVKQTLIASSTMEAE 119          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: A0A2K3N065_TRIPR (Copia LTR rider n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N065_TRIPR)

HSP 1 Score: 94.0 bits (232), Expect = 6.500e-20
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 0
Query:    1 MRVFPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSG---QDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            M   PY  +V +L++ +  TR DIA+AVS   ++  NPG AH +A+  IL+Y+  ++N  + Y G   +D    +  Y DSDYA C+DSR+S+S     + G AISW A  Q+V A+ TTEAE
Sbjct: 1090 MNSIPYANIVGSLMYAMVCTRPDIAYAVSLVSRYMANPGKAHWQALKWILRYINGSLNRVLIYGGALGEDSKAVIEGYVDSDYAGCMDSRKSISGYVFTMFGTAISWKATLQKVVALSTTEAE 1212          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: UPI001B3569EF (secreted RxLR effector protein 161-like n=1 Tax=Glycine max TaxID=3847 RepID=UPI001B3569EF)

HSP 1 Score: 88.6 bits (218), Expect = 8.740e-20
Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 0
Query:    1 MRVFPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSGQDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            M   PY  VV ++++  T TR DI+ A  T  ++  NPG+ H +A  K+L+Y+    +  +TY   D  +E+  Y+DSD+A C+D+R+S      LL GGAISW +  Q V A  T EAE
Sbjct:   32 MEEIPYASVVGSIMYAQTCTRPDISFATGTLGRYQSNPGMEHWKAAKKVLRYLQGTKDHMLTYKRSDH-LEVIGYSDSDFAGCVDTRKSTLGFVFLLAGGAISWKSAKQSVVAASTMEAE 150          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: UPI001B355435 (secreted RxLR effector protein 161-like n=1 Tax=Glycine max TaxID=3847 RepID=UPI001B355435)

HSP 1 Score: 88.6 bits (218), Expect = 9.860e-20
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = 0
Query:    1 MRVFPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSGQDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            M   PY  VVR++++  T TR DI+ A     ++  NPG+ H +A  K+L+Y+    +  +TY   D  +E+  Y+DSD+A C+D+R+S      LL GGAISW +  Q V A  T E E
Sbjct:   32 MEAIPYASVVRSIMYAQTCTRPDISFATGMLERYQSNPGMEHWKAAKKVLRYLQGTKDHMLTYKRSDH-LEVIGYSDSDFAGCVDTRKSTLGFVFLLAGGAISWKSAKQSVVAASTMETE 150          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: UPI001C53254D (secreted RxLR effector protein 161-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C53254D)

HSP 1 Score: 89.4 bits (220), Expect = 1.000e-19
Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 0
Query:    1 MRVFPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSGQDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            M+  PY   V +L++ +T TR DI+ AV    ++  NPG+ H  A  K+++Y+        TY   D  +E+  Y+DSDYA CLDSR+S S    LL GGAISW ++ Q   +  T EAE
Sbjct:   69 MKDIPYSSAVGSLMYAMTCTRPDISFAVGMLGRYVSNPGMDHWVAAKKVMRYLKGTREYMFTYRASD-RLEVIGYSDSDYAGCLDSRKSTSGYIFLLAGGAISWKSKKQTCVSTSTMEAE 187          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: A0A151TDV5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TDV5_CAJCA)

HSP 1 Score: 91.7 bits (226), Expect = 1.060e-19
Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = 0
Query:    1 MRVFPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSGQDFGIEMSA---YADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            M+  PY  VV +L++ +  TR DIA+A+S   +F  NPG +H +AV  IL+Y+  ++   + Y G   G E  A   + DSDYA CLDSR+S++       G AISW A  Q+V A+ TTEAE
Sbjct:  134 MKNIPYASVVGSLMYAMVCTRPDIAYAISIVSRFMANPGKSHWQAVKWILRYIKGSIGRGLVYGGAKNGTEAVAIEGFVDSDYAGCLDSRKSLTGFVFTAFGTAISWKATLQKVVALSTTEAE 256          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: A0A2Z7D8K7_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7D8K7_9LAMI)

HSP 1 Score: 90.9 bits (224), Expect = 1.790e-19
Identity = 44/120 (36.67%), Postives = 75/120 (62.50%), Query Frame = 0
Query:    1 MRVFPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSGQDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            MR  PY   + ++++M+ +TR DIA++VS   ++  NPGV H  AV  +L+Y+  ++N  + +S  D G+E++ Y DS+YA   D+R+S +     L G  +SW ++ Q + A+ TTE+E
Sbjct:   88 MRNVPYSNAIGSVMYMMVSTRPDIAYSVSCLSRYMANPGVVHWNAVKWLLRYLKHSLNYGLMFSKCDKGVELTGYVDSNYANDKDNRKSTTSYVFTLCGACVSWKSQLQHIVALSTTESE 207          
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Match: UPI001E1BA623 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA623)

HSP 1 Score: 89.0 bits (219), Expect = 1.940e-19
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 0
Query:    1 MRVFPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKILQYVLRAMNLRITYSG-QDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGGAISWHARTQEVTAVGTTEAE 120
            M+  PY+  V AL++  TTTR DIA+AVS   +F +NPGV H  AV +I++Y+    +  + +S  ++ G+    + D+DY    D R+S S    LL GG ISW +R QE TA  TTEAE
Sbjct:    1 MKEVPYQSAVGALLYFSTTTRTDIAYAVSKVARFNQNPGVQHWIAVKRIIRYLAETRDYGLIFSPIKEEGVH--GFTDADYGGDPDDRKSTSGCIFLLQGGYISWFSRKQECTATSTTEAE 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4367.11095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEV8_9PHAE5.110e-2141.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7K651_LASNI7.390e-2138.46Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
A0A2I0WQL2_9ASPA1.330e-2041.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3N065_TRIPR6.500e-2042.28Copia LTR rider n=1 Tax=Trifolium pratense TaxID=5... [more]
UPI001B3569EF8.740e-2040.00secreted RxLR effector protein 161-like n=1 Tax=Gl... [more]
UPI001B3554359.860e-2039.17secreted RxLR effector protein 161-like n=1 Tax=Gl... [more]
UPI001C53254D1.000e-1940.83secreted RxLR effector protein 161-like n=1 Tax=Ma... [more]
A0A151TDV5_CAJCA1.060e-1943.09Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z7D8K7_9LAMI1.790e-1936.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001E1BA6231.940e-1942.98secreted RxLR effector protein 161-like n=1 Tax=Da... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..120
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4367contigH-paniculata_contig4367:10676..11038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4367.11095.1mRNA_H-paniculata_contig4367.11095.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4367 10676..11311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4367.11095.1 ID=prot_H-paniculata_contig4367.11095.1|Name=mRNA_H-paniculata_contig4367.11095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MRVFPYREVVRALIWMVTTTRLDIAHAVSTTVKFCENPGVAHKRAVVKIL
QYVLRAMNLRITYSGQDFGIEMSAYADSDYATCLDSRRSVSDGAVLLGGG
AISWHARTQEVTAVGTTEAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like