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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 3 |
| Model size | 2614 |
| Cds size | 588 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4364.11089.1 >prot_H-paniculata_contig4364.11089.1 ID=prot_H-paniculata_contig4364.11089.1|Name=mRNA_H-paniculata_contig4364.11089.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
MVQDMSLRNRANRKYGNAEIKTTGRWCRSSNPLVSFACLLVLFLSGLVEW
TAHSGASMLVSALSDNAEIEANNLGQVAMSCAKTHCSTRGMSGLDLWISL
EKVCFQGTTWEHTRNGTYPYGGHHPEFANLTDSSNTTELIVTKIAGGGTR
DMMIWSPIYILFACLFLSVLGLSVGFMSGSRFGSAREKMETYPVA* back to topmRNA from alignment at H-paniculata_contig4364:614..9297- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4364.11089.1 ID=mRNA_H-paniculata_contig4364.11089.1|Name=mRNA_H-paniculata_contig4364.11089.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8684bp|location=Sequence derived from alignment at H-paniculata_contig4364:614..9297- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TAAACAGATCCCAGATAGCGTGTCGGATGTTTCACGCCTATTCCCTGCAC
GTGATACCAGCGCGCCTGCACGGCACGGCACTGACTTTTCTGTGCCTTCC
GCCTGTGCTGTCGATACCTTGCCTCACAGCAATACAGGCGGTGAGCACTG
ACTTTGACTGGTGCACTCCACATCACTGTCGCAGTGTCCGAACGGGATCC
ACAACGTGTACAGAAAGGACGAACAACAATCACAAAATCTGTTTGGGCAT
AGCCAGCACCAGCAGCAGCAGTACAACCTGCACCAGCTAAGACCGCTGCG
CTTTATACGGAAGCGAAATATGGTTCAAGATATGTCCTTGCGCAACCGGG
CAAACAGGAAATATGGCAACGCGGAAATTAAGACCACGGGCAGGTGGTGC
CGAAGCAGTAACCCTCTCGTCAGCTTCGCTTGTTTGTTGGTTTTATTCCT
GAGCGGCTTGGTTGAATGGACTGCGCATAGTGGTGCGAGTATGCTGGTAT
CGGCACTGTCTGACAACGCGGAAATTGAAGCCAACAACTTGGGTCAGGTG
AGATATGGGTAGATGTCTGGGTCAGTCCACTTGCCAATATGGGCAGATGT
CTGGGTCAGTCCACCTACCGATACTGCTTGATTTGAAATGTGTGCCGTGT
CCATTGCAAGTGGAATACATTTCTTACCTTCTCTTTCTACCCCTTTTCGT
CATCAAACGAGAAAAAGGCAAGTTTGTCTGATACTTGCAGATAGTCTACG
ACGGTACATACTTGGACTACAATCAAACCTAGACAGTCAGTAATGGTACA
TAGGGGGGGATACCTGGACCAAACTGAAGACTGTACCGTCTGTGAATTTG
TAGCTATTTCACTGATTTTTTGGCTTAGTCAACAACACGGCGGTCGCAGA
CATCACGGGTAGTACGCGTGATATAGCACAGCGGTGGCCTCTTCACTTAA
TTGCAAAAGGTGATGCGTATTGTGCCACTTCCTCTAGCTTATCCGGTGGG
GCATACACTCAAACACTGAAGGCGAAGCTGTGTTAGGCCCGAGGTATCTC
TGAGCCTTTTGCGGCACTACTATTGCGGCACGATCGGTGTCACTGTCAGT
AGAGATGCGTTCTCACGGTCGTCTCGTGTCGGATATACTACACGGACTGT
AGCAGGGCTGCAATCATGACGAAGGAGTAAAGGTCGGCAGCTTGAGAGCC
TAGTTTTGATGAGGGTGTAAACCGATCCCTACATTTGATGTGTAGCAAAT
GCTTGAGGTGCCGCTGCCGCCAAATCTGCGCTGGCTGATCATAATCCTTC
ACCTGAGAAATCTGTTATAGACATACTTTTTATGATTTGATTTCGCGGCA
CTGGGACCACACCGAGTCTCCCCTGTTTAGACATTTTTTTCGCAACAAAT
GAGTACAGCGCAAACATTGAGCTTGGGTACGATGACTTGAGCACGGTCGA
TTCTTGGGCAGAGTGTTCCTGGAGACGCTCAACTATTTTTCGAGTCCCCG
TTCTCTCAGGAAGATGTGACTTCAAACGAATTTCACCCAAACATGCCTCA
AGAGTTACCCATCGTTTGTAGGTATGTTCTAAATGCTTGCTGTTCTGTTT
TTCAAAGAGAGACCTTCCCAATTAAAAAACCGTGCTTCAGCATGTAGAAG
GGTCACTGCAATGAAGGCCACAACCGAAATGAATCGTGGAAAACATGTTC
GAGTCTTTTTTGTCTGATGCCCGCCCACATCGAACAGATCACCCCGCGGA
CAAATAAGAATACTTGCAAATGATTTTGACAAAAAAGTGAAAGTCTTTAC
TCCAGTTTCAAAATGATCGGAAACATGAAATAAAGTACTGACACCTGGTA
AAATTCGATTCAGGAGAACTATTTGCAGTTGTGGATAATCAATCCGGGGG
AAATGAACTGCCGGAGATCATCTCGGAACTCCGAGGATCATTTTCCCAAC
AGAAAGAAATCTATTTTTGCTACAATCAATTGATTATCCCCCCCCTATAT
ACGCATATTTATGCTTTGAGGTATATATTTTTAATGGTCAAATATGAGAA
ATTTTTAGATTATTTTGGATTGTTGAGCACGATGGAAAAAGAAAAGAAAA
TTTGTCCTCAGCATAACGTTTTTCTCACGCCCATGTTCCATCAATTCTGA
AAAGATCGAGATATGCCCATCAGAATGCGGCTTTAACCAGGTCACCAAGG
ATAGTTTTGGTAAACCGCAGGGTTCCGTGATCTCATGTGGATTCTCCGAA
AAAATAAACACATGCGGTCGCAAATTCGAAGAACAACGGCCTTCAAGCAA
CGGAGGCCCGCTCCACGCAAGCTCTGGATCAAGCGAGAAAATTAATAGGG
AGCGAGCATCAGTGATAACTCACAATCCGCGTCTCAAGCGTCCACACGAG
TAGGCATAGACTCTCTGGGACTCATGGAGGATGCGTCCGGGGTTACGGAT
CCACAACTATTTATCAGATACAATATCCGAACAGAGCGGCGAAGTATGGA
GTAAATAGAAAACAAGGGAGATTGCTGGTCGAGAGAAAAAACGAGGAAGA
GTTGCCCAAGTAGAGAATCAGGGAGGGCTCTGTGAGATTTAAAGGATTTG
CTTGCAAAGATATATGAAAGCATTCGCCTGAGTTTCGAAATAAGCTCGTG
TGTATTTTTGTGCCGAGGACAATCCTAACTTCTAATAAACCTCGGAAATC
GAACGGTGAGGTACTTCACTTGATGTGTCCGTTTACCCTGAAACTCAGGC
GAGTAAATTCAGTGTTTTCATCGAAAACATTTGCAAAGTGTTTGTATTGG
TCCCGGGGGCGAAGGATTTACGTCAGACGCGTAGGCTTGGATAATATCGT
CTTTATTCTGTAACTTACGCGATGGGAGCGACAGAGACGAGATTCCCACA
TTATATTACACATGATAAAGTGAGAAACCACATCTTAACCAATAAACCCT
TCGTCCACATGGTTAAAAATTGCCTTTTATGGGAGTATTTTTTTTCGTGC
GGCACAAAACTCATGACAAGATGAAGTATGCCACAGACCTACGCCCGAAT
GGGTAGGGTGGCTCGTGAACTGAGCATGACAAGAAGTCTAGTCAGAGGTC
TGTTGGTGGGTGCAACCCCCACACTGCCCACCTGGCCAAGCCGAACTGGG
GCGGCGCCTACCTTGAGCAAATAACTGTCCAGTAAAAAAAATGTAGAAAT
ACTTCGGTATGGAAGCATCGGATAAAGGTTTTTGCCTTAGCCTTCCGGGG
GTTGAAGAGAGAAGAAGGTATGGAGCTCCATACACTAATTATTCTGCTGA
ACTATGTACGAATCTAATTAAAATTGCGAACTTCTGGACGCTTTGAAGCG
TGATACAAAACTAATTGCTTACTGGTTGCGCTCATTTATGCTTCTGGTCT
GATGATGCGATGATATCGTTCACCTGCAGTATGACTGCTAGCCCCGCAGC
TATCACGTTCGCATAATTCATTTCTGTCGCCTGTGCCAGCTGTTTGTGAC
CTGTAACCCTGAGACGTGGGTGCATTATGCGGGTGCGTGCGTCCTGCACG
GTGTTAGTGTCCGAACACCATCGTGAGGCCCCCCATGTTCGGCAAAGCGT
GCGGTACCGCAAACCCCAAAATAAATATGTTGAGGGATCAGCGCCTTTGC
TCCGATTTAGAACCAGGTTAGAATATATGGAATTTTTTGCCAAAATCTGG
CCCCAACGAGGGCCGAGTGAGAAAATCACTTTTGCTTCAAAAACTCGACA
AAAAGCAACAATCTCAAGTAACGGTCCCCATCTGTTTTACTTGTGCTGTT
TTTTTTGTTCGGACAAGACCTCGTCCAAAGAGCTTGTTCTATGTGTTCTA
TTTGGTTTTCGTCGATGTAGCACCATGCCATCACGTTGGTTTAAAGACCA
GAGTTCTGAGAATTGGTCCGTCTGTCCGGGAAAGAAGTCTATCCGAACTG
GGTAGGTATCCAATCCCCTGTCGAAGAAGGCTGTGCTGCCTAGGATTATC
TGTTGTTGATTTCCCTGGGTAACTTCTTTCCGGAGGGCACCTAGCAATCC
GTGCACTTCGGTGCATGGTGATGCATTTTCAGGAACGAGTCTATGCCCTA
ACGGGTAGGGCACGGCTAGGGGTAACCCATTGCCGAATACCGGACGCAAG
TGTGATCAAGGGTTTTGACGAGTGCGGATTCTGCTTCTCTAGGGCAGTCT
AAAACTAAACGTCAAAACAGACAAGTCTCGTACAACGGCTACCCCCACAT
GTTTCCTCGGTTTTTGAGCGTAGAACCGAGGGAAGACCGACGTGATCATT
AACCCGAATTCTTCGGAGATCTAAATCGGGGCTTCGTACTTGATACTTAG
TCGTGGGATTAAGCTCCTCCCTTCACAGTGCTTACGATGTATGTTAATAG
AGGTTGCATACGCCGGGGTGGAAAGGAAGGGCTGTGCTGCCTCCGGCAGA
TATTCCACCCACGTTTGCCATGCGTCTTGCACGTTGTTGATTTCTCCATG
ACAAGACACAGCCACGACAACACAACAGCTAATCGTAGCCCAAGTTTCCC
CAATCCGTAGATGTGATGGGAAGCTCCAATTCGCCACTTGATCCATCTCG
CGGGTTCACGTCGACCGCTGGAATTACCGAGCTTGTTCCGTTGAAAACAG
ATAATGGAATGATGTGGAAATGCCCGAGTACATCCCTCCAGAGTTCATTT
TGAAACAACTTTATTCCGGAAGGCTTCACTGAACAGATGCACGATGTAAC
GATGCTACTCAAGTGCTGTTGCTCTGAAAAGATGATACCATGATAATCGA
CACTTTCGTGCTAATGTCGATATGCACGCCACGGACCTACGCCCGAATGG
ATAGGGTAGCTCGTGAACTGAGCATGACCGGAAGTCTAGTCAGAGATCTT
TAAATGAGTACAACCCCCACACTGCCTACCTGGTTCAGCTGAACCGGGGT
GCCTAGCCCGTAGAAGAACAAATAACTGCTTTGTTGAAGGAAATGGAAGC
ATCGGATGGAATTTTTTGCCTTATCCTTCCGGGGGTTAAAACAAAAGATG
TCAATATGCACGCTACAACTTAATTTATTCACCATGATTAATATCGTGCA
CGCGGGTAATAAAGCGTTTACATGAAAAATGATCCAACGTGCGCAGGTCC
CGTGAAAGGTGGCGGGAATATTGAGGCATGATCAGCGAGGCTCAAAGACC
AGCGCCAAAATGCGTGTCGTCGCTCACCGTCGTCTTTTTGGTTCCGTGAG
CCTTTCGTATGAAGGCTTTGACAAATGATGCAAATCTTTGAAATTACTCC
CAAACATTTTATTGGGGATATTAAGGCTTAGACTCTGAAAATTACTGTTT
CTGTCTGCAAGAGAGAGGACCGTGCTCAGCTTGCGTTTTGCCTTGCCCGA
TTCTCAAGTGCTGGTTTATTTCTGTAATGAGCTATCTTTATAGATTTGAT
TTGCTTTTGACTGTCTGGAGCGTTTTTTCTCTTTTCTTACAGGTGGCTAT
GTCATGTGCGAAGACTCATTGCTCGACCAGGGGGATGTCTGGCCTGGACT
TGTGGATTTCTCTCGAAAAGGTGAGTAAGTACGTTTTGCTCCCCTCTGGC
CTAGCCTGGGGTAACAACTGTGTCCGAGAGTGTTGGTTATCGAACTTGCC
TTGGGGACCTTGTGAATGGATCAACGACGGCCGAAACGTAAAATCAATGT
GGCAACAAGATGGAGTTGGAATCAGGTCCCCATTCGTTCCCTCCTACGGT
ACATCCACCCGCTTCATAAGTACGCGGTCCATCTTCCTTGACCCTCGTTG
ATCCAAACACAAGTTCCACTCGACCCCCGGCTGTGTCAGACCTTGGCCTC
CTCCTAGATTCCGGTCAAGTCCGATCCGATTGTGTGTTTATCGCTTACGG
GCGCTATCGCTTCTGTTGTATCATGTCCAGCCAAGTCAACACCTTTTGTG
GATCACAAAACTTTGACCAGTACGACAGCCATGTATTATGCAGGATTTCG
AAACACGTTCGGCCGATATTGAGTGGTGGGTTTTCCGGGTGTAACGTAAC
GTGTCATACTTTATTTTCAAGCAAGATGTGGGATTTCCATTTCGATCTAG
TCCCACAAACTTGAAAACTTTTTCTCTCCAGTCGTGTTGAATGACGAATG
ACCGGTGTGTGCGTGTGTGTGGTCGAGTCGAGCTATCAAGAATGCGAAGT
GAGCTTGAAATGAGTCGTCACTTGACACTGATACTCATGGCTCTGAATGC
AAAGGTGTGTTTCGAAGATATGACTTGTTTGAACAGGGTGGGTGTTTTGT
GCTCAATTATGCCAATCTCAAGTCGTTGTTTCCATCCTAATGGGATGGAA
AATCGGCAGCTTAATGGTATAGTCATGTTCTTGCGAAAATCACCAGCCTC
GTGAGGTACGCACAGGGAGACGTGAGACATGACGTCGTGCAATCGCCAAA
CGGGAAGCTCCATCTGGTGTAAAGTCAATGGCAAGCAGAGGCTACAAGTC
ACGTCACCTCAGGAGGCAAAGACTCTCTCGTGTAGCCTAAACTCTGGAGA
ATAATGTATCACCTGTTGTTTTGTTATCGCACCAGAGGCCGACCTTCACC
GCTAGTGTATGTCCCATTGATTCTTTCTGAATATATCTACTACACTTGTT
ACTCTCCTTACTCTCCGACTTACTTGTCTCTTGCGTCCACCTTAGGTGTG
CTTCCAGGGTACCACGTGGGAGCACACCCGAAACGGCACATATCCTTATG
GTGGACACCATCCAGAGTTCGCGAACCTTACGGACTCATCCAATACGACG
GAATTGATTGTGACCAAGATAGCAGGGGGAGGCACACGTGACATGATGAT
TTGGTCTCCGATATACATCCTATTCGCGTGTTTGTTCTTGTCTGTGTTGG
GGCTCTCCGTAGGATTCATGTCGGGATCTAGATTCGGTTCTGCTCGTGAA
AAGATGGAAACCTATCCCGTGGCATGAAGGACGGTGCTGTCCGATACGTG
AGAAGCGATTAGTGTGGTTACGGTTCAAAATCCTCATTTTCTCGTTAACC
TGGCCTGATTTTGAGTCTCTCGTATTGAATATATAGGAGCTTCATGAAAG
TGCGGACGTCAATTGTAGTCTGTGTAAGGAACATGTTTAGGTTCCCCAGA
AATGAAGGCTCAAATTGTCATCGTGGATGATTGTTTGTTGACACCGGTGC
TGTAGTCGATGGTGATTTATTTTTGAGCACTTGGGCAAGTTTTACTAATG
TTTTGTATCGAGTAATATCTAGCGTTTGGAGTTATGTACGGCAAATGGAT
CTGGGAGGGATCACATCATTTTCTTGAGCCACGTTCCATGCCCCCCCCAC
CTCCCACCCTTGTCATATCTAGGAACAAGGGAATTATTTTTCATTGTCAC
CAATAGATTGGTACCTCTTATGTGATGAATAGTGGCAGAGAAGCGGAAAG
CGGCGTCATGATATTGGATGGTGTTTCCTGACAACCAAGGATTTTTGTTC
GATCAGAATTCTCCTTACAAGATATTGGCTAATCCGAAAACTGTGGGCAC
TTTTTCGCTTGCTCTGTCCTGGTCGATGGATTTATTAATTACTTGATATC
GAGTAGTCTTCTGTGTCGGGTCAAACGCTAGTGGGTGGGGTAGGATGAAA
GAAAACAATGGGTGCAAACCTCTAGTCTTTTCAATGCGTACACTATGTCT
TCGATAGATGGCTTTATTTTTCGATTTTTCGAGAGTGTGATCATGATCAT
CTCTCTCCGTGTTCGGTTTTGAGTAATCTGACCTTGTGTCTCTTCCCCTG
TCCTTCACCACACGTGAGGCATGAGTCGAGATATGTCTTGATCTGTGTTG
ATGTCGGAAGCTGCCCAGAGTAAGATGGGAATAAAGTGGGCATTTGGCCA
CCGTTATCTTGACCGGAAGCAGTCGGTGTGAGCAAAATCATTCCACCACG
TGTATGTATCTGTCCTTATGTATATTGGATGGGACCGAAAAGGTCGATAT
GAACTGTCGAGGTTCCACATCCGCCTAACGATGTCATGAACGTCGCGTTT
CCCTCCTCCGAGGTGGGGATTAGATGAGCGATTCGAAAGGTTCGACGTGT
AATTTACAGTAGCATAACTCATTTTAGTGCTCGGTTGTCGTATTAGAACA
AACGGGCATGCGACAGAAACTCTCGCTGAGAGAAGGAGTCGTAAATGGAA
TTGCAGCGCCGCTAAAAAGGAATAGGAAGTGGTATTTTGATTCTGTTCGC
GTGGCGCTTGAATGACGAGGAACGTTCATCCGGGGCATGGTTTCCGACCA
ATGGTGGAAGATATAATTAATCGTTTCAAGGGGGTGGAAGTAACATACGA
TTTAAGATGAACGGGATCTGGGGAAAAACGTCATGAATGTGAACGGCAGA
TACTGAAATTGTATTCACATTTATGGAAGTGACCCGTGAGGAGATTTTTG
TTTGACCTTCGTTCACACGGCGATGGTATTGCTAACGGAGAAGAGAGGAC
TGCACAATCAATCGATGGGGATGTAGTTGTGCTCAACAGTTATGTTGAAT
GCTGGAGTTATCCTGCGTAAAATTATTTCATTCCATAGGGTAGATGTTTT
ATCACGAGCGAATTTTGAACCGTGACATTTCACTCCTTGTGAACGTAAAT
CATGGAAGAATTTTAAAGAGATATCCTCCTCAAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig4364:614..9297- >mRNA_H-paniculata_contig4364.11089.1 ID=mRNA_H-paniculata_contig4364.11089.1|Name=mRNA_H-paniculata_contig4364.11089.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig4364:614..9297- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTCAAGATATGTCCTTGCGCAACCGGGCAAACAGGAAATATGGCAA
CGCGGAAATTAAGACCACGGGCAGGTGGTGCCGAAGCAGTAACCCTCTCG
TCAGCTTCGCTTGTTTGTTGGTTTTATTCCTGAGCGGCTTGGTTGAATGG
ACTGCGCATAGTGGTGCGAGTATGCTGGTATCGGCACTGTCTGACAACGC
GGAAATTGAAGCCAACAACTTGGGTCAGATGGTTCAAGATATGTCCTTGC
GCAACCGGGCAAACAGGAAATATGGCAACGCGGAAATTAAGACCACGGGC
AGGTGGTGCCGAAGCAGTAACCCTCTCGTCAGCTTCGCTTGTTTGTTGGT
TTTATTCCTGAGCGGCTTGGTTGAATGGACTGCGCATAGTGGTGCGAGTA
TGCTGGTATCGGCACTGTCTGACAACGCGGAAATTGAAGCCAACAACTTG
GGTCAGGTGGCTATGTCATGTGCGAAGACTCATTGCTCGACCAGGGGGAT
GTCTGGCCTGGACTTGTGGATTTCTCTCGAAAAGGTGGCTATGTCATGTG
CGAAGACTCATTGCTCGACCAGGGGGATGTCTGGCCTGGACTTGTGGATT
TCTCTCGAAAAGGTGTGCTTCCAGGGTACCACGTGGGAGCACACCCGAAA
CGGCACATATCCTTATGGTGGACACCATCCAGAGTTCGCGAACCTTACGG
ACTCATCCAATACGACGGAATTGATTGTGACCAAGATAGCAGGGGGAGGC
ACACGTGACATGATGATTTGGTCTCCGATATACATCCTATTCGCGTGTTT
GTTCTTGTCTGTGTTGGGGCTCTCCGTAGGATTCATGTCGGGATCTAGAT
TCGGTTCTGCTCGTGAAAAGATGGAAACCTATCCCGTGGCATGAGTGTGC
TTCCAGGGTACCACGTGGGAGCACACCCGAAACGGCACATATCCTTATGG
TGGACACCATCCAGAGTTCGCGAACCTTACGGACTCATCCAATACGACGG
AATTGATTGTGACCAAGATAGCAGGGGGAGGCACACGTGACATGATGATT
TGGTCTCCGATATACATCCTATTCGCGTGTTTGTTCTTGTCTGTGTTGGG
GCTCTCCGTAGGATTCATGTCGGGATCTAGATTCGGTTCTGCTCGTGAAA
AGATGGAAACCTATCCCGTGGCATGA back to top
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