prot_H-paniculata_contig4355.11077.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4355.11077.1
Unique Nameprot_H-paniculata_contig4355.11077.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length211
Homology
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BLAST of mRNA_H-paniculata_contig4355.11077.1 vs. uniprot
Match: D8LQ44_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ44_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 2.230e-43
Identity = 93/183 (50.82%), Postives = 112/183 (61.20%), Query Frame = 0 
Query:    3 LTRGLADFIHTCLGLRGELFVPEPATQAG----------------------RNTNNYSNNRGGRSGRGTGRGGRYTAPTPKEDKVAESKKIRRRMLVDVLVRGETSIPPSILMFTVGLIRHWGDSQACRKALNIATAIMAEYDLRSDVMRQKLSRDLFRTTIDALVEGAAHLRGMEWEAVVLV 163
            LT+GLAD +H CL LRGEL +P  A   G                           YS     R GR    GG  +    + +KV + K+ RRR L+DV VRG+ SIPPS++MFTVGLIRHWGD+ +CRKAL IA  I+ EYDLRSDVM+Q+LSRDLF   +DALV GA  L+GMEWEAV LV
Sbjct:  975 LTKGLADIVHACLALRGELNLPPSALDKGGAGGXXXXXXXXXXXXXXXXXXXXXQPYS----ARGGRXXXXGGNLSKKAAQAEKVLDGKRKRRRALLDVFVRGQGSIPPSLVMFTVGLIRHWGDAYSCRKALAIAHCILLEYDLRSDVMKQRLSRDLFSGVVDALVAGAPQLQGMEWEAVTLV 1153
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4355.11077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ44_ECTSI2.230e-4350.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4355contigH-paniculata_contig4355:4429..7145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4355.11077.1mRNA_H-paniculata_contig4355.11077.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4355 4412..7888 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4355.11077.1 ID=prot_H-paniculata_contig4355.11077.1|Name=mRNA_H-paniculata_contig4355.11077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
MMLTRGLADFIHTCLGLRGELFVPEPATQAGRNTNNYSNNRGGRSGRGTG
RGGRYTAPTPKEDKVAESKKIRRRMLVDVLVRGETSIPPSILMFTVGLIR
HWGDSQACRKALNIATAIMAEYDLRSDVMRQKLSRDLFRTTIDALVEGAA
HLRGMEWEAVVLVTFPFACLTRICSKFIHPPINVFVVVGGPRLAMPVVYL
RHTRSYSGIL*
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