prot_H-paniculata_contig4341.11064.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4341.11064.1
Unique Nameprot_H-paniculata_contig4341.11064.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length570
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4341.11064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 339..381
e-value: 2.0E-7
score: 31.1
coord: 295..322
e-value: 2.0E-5
score: 24.7
coord: 207..248
e-value: 1.5E-4
score: 21.9
coord: 415..453
e-value: 1.3E-4
score: 22.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 183..407
e-value: 3.7E-7
score: 30.9
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 304..517
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 152..396
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 152..396
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 304..517
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 196..476

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4341contigH-paniculata_contig4341:288..1997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4341.11064.1mRNA_H-paniculata_contig4341.11064.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4341 274..2986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4341.11064.1 ID=prot_H-paniculata_contig4341.11064.1|Name=mRNA_H-paniculata_contig4341.11064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=570bp
MDEAQHDPVSDRTLFGMGEVQHGPLFKALQLVVLLQWLEDDDLDALQTTS
LKTCATCRGTRPYLVRVNAFTPQTLWRRPVTRTEHACIVSGDGQHSRVQS
RVPPARVTRILWEGGLVNWPVQPEDWISTVEEVCFGSDVNTYSFAGRGWP
LGVKTIHFGDSFDMFLVDTVACCARIQKICFGRDFNCPLYAVIWPSHLKI
LSFGSRFNQNLAGVCLPTGLEEIVLGSGFDKPIDHVRWPPGLLRLTFGFG
FRQNVNKTKWPPSLRELTFGWKFTKSIEGVKWPASLRRLIFGRGFNKPLT
GAQFPPNLKYLKFGFYFNQNLEGVDWPLGLSQLVLSGRFNQPLTEVNFPP
TLESLILDGHDFDQPLEQVPWPRSLKELAVGTSFDQSLLGVSLPSNLRVV
SLGGFRGHFVDQGSLEKVVFPAHLETLTFGYRFNSDVLHLSWPQGLKRLT
FGDMFDQPIATVVWPARLQFLKLGDAFNQDVVGMGWPKAMDTVIFGKTFN
GQLRAREMPAGLKNLNLHRGYSRHMDPVDMWPVGVQKAMLELAGGVRVPR
ITSSDSIPCLKCGCEKTEW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf